RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 GNG4P50150 75 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 OR10J3Q5JRS4 329 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 TMEM136Q6ZRR5 245 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 STPG3Q8N7X2 389 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 LY96Q9Y6Y9 160 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 MT-ND6P03923 174 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 C3orf79P0CE67 100 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 KLF3P57682 345 aaPredicted RBP14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 CX3CL1P78423 397 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 KLRB1Q12918 225 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 FAM201AQ5SY85 155 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 WDR73Q6P4I2 378 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 PQLC2Q6ZP29 291 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 ATOH7Q8N100 152 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 FAM19A2Q8N3H0 131 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 Q8TCH9 128 aa14.07□□□□□ -0.16
SCAMP4-201ENST00000316097 TRAV3A0A0B4J244 114 aa14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 ZNF324O75467 553 aaPredicted RBP14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 PTTG1IPP53801 180 aa14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 BSPH1Q075Z2 132 aa14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 CDSNQ15517 529 aa14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 OR2V2Q96R30 315 aa14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 DCTN5Q9BTE1 182 aa14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 NPVFQ9HCQ7 196 aa14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 JKAMPQ9P055 326 aa14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 LSM4Q9Y4Z0 139 aaKnown RBP14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 ACTL6BO94805 426 aa14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 CRYBB3P26998 211 aa14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 GRNP28799 593 aaKnown RBP14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 DUTP33316 252 aaKnown RBP14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 GPR12P47775 334 aa14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 MRPL54Q6P161 138 aaKnown RBP14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 Q6ZVH6 145 aa14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 LRRC29Q8WV35 223 aa14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 HES4Q9HCC6 221 aa14.06□□□□□ -0.16
SCAMP4-201ENST00000316097 IGHV3OR15-7A0A075B7D8 119 aa14.05□□□□□ -0.16
SCAMP4-201ENST00000316097 SAA2-SAA4A0A096LPE2 208 aa14.05□□□□□ -0.16
SCAMP4-201ENST00000316097 HELTA6NFD8 242 aa14.05□□□□□ -0.16
SCAMP4-201ENST00000316097 CCL25O15444 150 aa14.05□□□□□ -0.16
SCAMP4-201ENST00000316097 IGHV3-13P01766 116 aa14.05□□□□□ -0.16
SCAMP4-201ENST00000316097 NTF3P20783 257 aa14.05□□□□□ -0.16
SCAMP4-201ENST00000316097 RPL19P84098 196 aaKnown RBP14.05□□□□□ -0.16
SCAMP4-201ENST00000316097 NIT1Q86X76 327 aa14.05□□□□□ -0.16
SCAMP4-201ENST00000316097 PROP1O75360 226 aa14.05□□□□□ -0.16
SCAMP4-201ENST00000316097 AARDQ4LEZ3 155 aa14.05□□□□□ -0.16
SCAMP4-201ENST00000316097 RNASE8Q8TDE3 154 aaKnown RBP14.05□□□□□ -0.16
SCAMP4-201ENST00000316097 YLPM1P49750 1951 aaKnown RBP14.04□□□□□ -0.16
SCAMP4-201ENST00000316097 HCFC1P51610 2035 aa14.04□□□□□ -0.16
SCAMP4-201ENST00000316097 LRBAP50851 2863 aa14.04□□□□□ -0.16
SCAMP4-201ENST00000316097 BMPR1BO00238 502 aa14.04□□□□□ -0.16
SCAMP4-201ENST00000316097 HINT1P49773 126 aaPredicted RBP14.04□□□□□ -0.16
SCAMP4-201ENST00000316097 TEPPQ6URK8 271 aa14.04□□□□□ -0.16
SCAMP4-201ENST00000316097 ACP7Q6ZNF0 438 aa14.04□□□□□ -0.16
SCAMP4-201ENST00000316097 MIR17HGQ75NE6 70 aa14.04□□□□□ -0.16
SCAMP4-201ENST00000316097 MOGAT3Q86VF5 341 aa14.04□□□□□ -0.16
SCAMP4-201ENST00000316097 VKORC1Q9BQB6 163 aa14.04□□□□□ -0.16
SCAMP4-201ENST00000316097 PKDREJQ9NTG1 2253 aa14.04□□□□□ -0.16
SCAMP4-201ENST00000316097 FAM90A27PA6NNH2 459 aa14.04□□□□□ -0.16
SCAMP4-201ENST00000316097 CCL21O00585 134 aa14.04□□□□□ -0.16
SCAMP4-201ENST00000316097 MMP23AO75900 390 aa14.04□□□□□ -0.16
SCAMP4-201ENST00000316097 PRRX1P54821 245 aa14.04□□□□□ -0.16
SCAMP4-201ENST00000316097 MAJINQ3KP22 176 aa14.04□□□□□ -0.16
SCAMP4-201ENST00000316097 TMEM108Q6UXF1 575 aa14.04□□□□□ -0.16
SCAMP4-201ENST00000316097 ITLN1Q8WWA0 313 aa14.04□□□□□ -0.16
SCAMP4-201ENST00000316097 M0R1X1 148 aa14.03□□□□□ -0.16
SCAMP4-201ENST00000316097 IGHV3-7P01780 117 aa14.03□□□□□ -0.16
SCAMP4-201ENST00000316097 ERVK-16P61578 105 aa14.03□□□□□ -0.16
SCAMP4-201ENST00000316097 EDDM3AQ14507 147 aa14.03□□□□□ -0.16
SCAMP4-201ENST00000316097 PSG5Q15238 335 aa14.03□□□□□ -0.16
SCAMP4-201ENST00000316097 ORAOV1Q8WV07 137 aa14.03□□□□□ -0.16
SCAMP4-201ENST00000316097 NEUROG1Q92886 237 aa14.03□□□□□ -0.16
SCAMP4-201ENST00000316097 TCF19Q9Y242 345 aa14.03□□□□□ -0.16
SCAMP4-201ENST00000316097 CACNA1AO00555 2505 aa14.03□□□□□ -0.16
SCAMP4-201ENST00000316097 RELBQ01201 579 aa14.03□□□□□ -0.16
SCAMP4-201ENST00000316097 UNQ5815/PRO19632Q6UWF5 114 aa14.03□□□□□ -0.16
SCAMP4-201ENST00000316097 KLHDC1Q8N7A1 406 aa14.03□□□□□ -0.16
SCAMP4-201ENST00000316097 LINC01560Q8TB33 94 aa14.03□□□□□ -0.16
SCAMP4-201ENST00000316097 TSKUQ8WUA8 353 aa14.03□□□□□ -0.16
SCAMP4-201ENST00000316097 SPINT2O43291 252 aa14.02□□□□□ -0.16
SCAMP4-201ENST00000316097 CA2P00918 260 aa14.02□□□□□ -0.16
SCAMP4-201ENST00000316097 AMY1AP04745 511 aa14.02□□□□□ -0.16
SCAMP4-201ENST00000316097 IGFBP2P18065 325 aa14.02□□□□□ -0.16
SCAMP4-201ENST00000316097 LEMD1Q68G75 181 aa14.02□□□□□ -0.16
SCAMP4-201ENST00000316097 LCN12Q6JVE5 192 aa14.02□□□□□ -0.16
SCAMP4-201ENST00000316097 BORCS7Q96B45 105 aa14.02□□□□□ -0.16
SCAMP4-201ENST00000316097 SERTAD4Q9NUC0 356 aa14.02□□□□□ -0.16
SCAMP4-201ENST00000316097 CDC42EP3Q9UKI2 254 aa14.02□□□□□ -0.16
SCAMP4-201ENST00000316097 PKD1L2Q7Z442 2459 aa14.02□□□□□ -0.17
SCAMP4-201ENST00000316097 IGLV3-9A0A075B6K5 115 aa14.02□□□□□ -0.17
SCAMP4-201ENST00000316097 OR10J4P0C629 311 aa14.02□□□□□ -0.17
SCAMP4-201ENST00000316097 AREGP15514 252 aa14.02□□□□□ -0.17
SCAMP4-201ENST00000316097 TIGITQ495A1 244 aa14.02□□□□□ -0.17
SCAMP4-201ENST00000316097 RPL39P5Q59GN2 51 aa14.02□□□□□ -0.17
SCAMP4-201ENST00000316097 CD177Q8N6Q3 437 aa14.02□□□□□ -0.17
SCAMP4-201ENST00000316097 OR52E5Q8NH55 327 aa14.02□□□□□ -0.17
SCAMP4-201ENST00000316097 TMEM140Q9NV12 185 aa14.02□□□□□ -0.17
SCAMP4-201ENST00000316097 GNG12Q9UBI6 72 aa14.02□□□□□ -0.17
SCAMP4-201ENST00000316097 TET2Q6N021 2002 aaPredicted RBP14.01□□□□□ -0.17
SCAMP4-201ENST00000316097 FAM90A9PA6NNJ1 464 aa14.01□□□□□ -0.17
SCAMP4-201ENST00000316097 MGST1P10620 155 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms