RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 IGHV3-74A0A0B4J1X5 117 aa11.48□□□□□ -0.57
SPAST-201ENST00000315285 IGKV1D-33P01593 117 aa11.48□□□□□ -0.57
SPAST-201ENST00000315285 IGKV1-33P01594 117 aa11.48□□□□□ -0.57
SPAST-201ENST00000315285 EEF1AKMT3Q96AZ1 226 aa11.48□□□□□ -0.57
SPAST-201ENST00000315285 CEACAM1P13688 526 aa11.47□□□□□ -0.57
SPAST-201ENST00000315285 CFPP27918 469 aa11.47□□□□□ -0.57
SPAST-201ENST00000315285 TCF23Q7RTU1 214 aa11.47□□□□□ -0.57
SPAST-201ENST00000315285 RPP21Q9H633 154 aaKnown RBP11.47□□□□□ -0.57
SPAST-201ENST00000315285 PSPNO60542 156 aa11.47□□□□□ -0.57
SPAST-201ENST00000315285 RNASE7Q9H1E1 156 aaKnown RBP11.47□□□□□ -0.57
SPAST-201ENST00000315285 AUP1Q9Y679 476 aa11.47□□□□□ -0.57
SPAST-201ENST00000315285 PGPEP1LA6NFU8 196 aa11.47□□□□□ -0.57
SPAST-201ENST00000315285 GCSHP23434 173 aa11.47□□□□□ -0.57
SPAST-201ENST00000315285 KCNS1Q96KK3 526 aa11.47□□□□□ -0.57
SPAST-201ENST00000315285 ZNF581Q9P0T4 197 aa11.47□□□□□ -0.57
SPAST-201ENST00000315285 TRAV1-1A0A0B4J248 108 aa11.47□□□□□ -0.57
SPAST-201ENST00000315285 A0A1B0GUT8 65 aa11.47□□□□□ -0.57
SPAST-201ENST00000315285 FAM90A9PA6NNJ1 464 aa11.47□□□□□ -0.57
SPAST-201ENST00000315285 HERPUD1Q15011 391 aa11.47□□□□□ -0.57
SPAST-201ENST00000315285 LY6EQ16553 131 aa11.47□□□□□ -0.57
SPAST-201ENST00000315285 FMC1Q96HJ9 113 aa11.47□□□□□ -0.57
SPAST-201ENST00000315285 IZUMO1RA6ND01 250 aa11.46□□□□□ -0.57
SPAST-201ENST00000315285 IL18BPO95998 194 aa11.46□□□□□ -0.57
SPAST-201ENST00000315285 C5orf24Q7Z6I8 188 aa11.46□□□□□ -0.57
SPAST-201ENST00000315285 GPR82Q96P67 336 aa11.46□□□□□ -0.57
SPAST-201ENST00000315285 SERF1AO75920 110 aa11.46□□□□□ -0.57
SPAST-201ENST00000315285 FABP2P12104 132 aa11.46□□□□□ -0.57
SPAST-201ENST00000315285 CD59P13987 128 aa11.46□□□□□ -0.57
SPAST-201ENST00000315285 KLRB1Q12918 225 aa11.46□□□□□ -0.57
SPAST-201ENST00000315285 EFNB3Q15768 340 aa11.46□□□□□ -0.57
SPAST-201ENST00000315285 C21orf62-AS1Q17RA5 79 aa11.46□□□□□ -0.57
SPAST-201ENST00000315285 ZCCHC24Q8N2G6 241 aaKnown RBP11.46□□□□□ -0.57
SPAST-201ENST00000315285 C21orf62Q9NYP8 219 aa11.46□□□□□ -0.57
SPAST-201ENST00000315285 IGKV1-5P01602 117 aa11.46□□□□□ -0.58
SPAST-201ENST00000315285 GPX1P07203 203 aa11.46□□□□□ -0.58
SPAST-201ENST00000315285 PRCDQ00LT1 54 aa11.46□□□□□ -0.58
SPAST-201ENST00000315285 FOXF2Q12947 444 aa11.46□□□□□ -0.58
SPAST-201ENST00000315285 FAM106AQ4KMX7 169 aa11.46□□□□□ -0.58
SPAST-201ENST00000315285 TMEM136Q6ZRR5 245 aa11.46□□□□□ -0.58
SPAST-201ENST00000315285 SYT8Q8NBV8 401 aa11.46□□□□□ -0.58
SPAST-201ENST00000315285 PIMREGQ9BSJ6 248 aa11.46□□□□□ -0.58
SPAST-201ENST00000315285 A0A1B0GW64 132 aa11.46□□□□□ -0.58
SPAST-201ENST00000315285 SRRM5B3KS81 715 aa11.46□□□□□ -0.58
SPAST-201ENST00000315285 IGHV3-23P01764 117 aa11.46□□□□□ -0.58
SPAST-201ENST00000315285 STAG3L2P0CL84 134 aa11.46□□□□□ -0.58
SPAST-201ENST00000315285 Q9H3A6 140 aa11.46□□□□□ -0.58
SPAST-201ENST00000315285 SOX21Q9Y651 276 aaPredicted RBP11.46□□□□□ -0.58
SPAST-201ENST00000315285 TMEM238LA0A1B0GVL6 79 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 A6NJY4 79 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 FOXH1O75593 365 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 DLX6P56179 175 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 CD69Q07108 199 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 FOXL2NBQ6ZUU3 175 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 OCC1Q8TAD7 63 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 HEATR5AQ86XA9 2040 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 HIGD1CA8MV81 97 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 B3GALT5-AS1P59052 145 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 FAM19A2Q8N3H0 131 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 TMEM242Q9NWH2 141 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 RFNGQ9Y644 331 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 TRBV24-1A0A075B6N3 115 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 CXCL1P09341 107 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 RAB37Q96AX2 223 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 FBXL7Q9UJT9 491 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 DOCK8Q8NF50 2099 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 TRBV20OR9-2A0A075B6H5 130 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 A0A1W2PRE2 83 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 FAM53AQ6NSI3 398 aaPredicted RBP11.45□□□□□ -0.58
SPAST-201ENST00000315285 TREML4Q6UXN2 200 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 BMPERQ8N8U9 685 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 KLK15Q9H2R5 256 aa11.45□□□□□ -0.58
SPAST-201ENST00000315285 H3BVH4 76 aa11.44□□□□□ -0.58
SPAST-201ENST00000315285 ADMP35318 185 aa11.44□□□□□ -0.58
SPAST-201ENST00000315285 DNLZQ5SXM8 178 aa11.44□□□□□ -0.58
SPAST-201ENST00000315285 C14orf144Q96I85 54 aa11.44□□□□□ -0.58
SPAST-201ENST00000315285 NBASA2RRP1 2371 aa11.44□□□□□ -0.58
SPAST-201ENST00000315285 C7orf71A4D174 169 aa11.44□□□□□ -0.58
SPAST-201ENST00000315285 LYL1P12980 280 aa11.44□□□□□ -0.58
SPAST-201ENST00000315285 ATP5J2P56134 94 aa11.44□□□□□ -0.58
SPAST-201ENST00000315285 RPP25LQ8N5L8 163 aaKnown RBP11.44□□□□□ -0.58
SPAST-201ENST00000315285 IGHV3OR16-10A0A075B7F0 116 aa11.44□□□□□ -0.58
SPAST-201ENST00000315285 PRELID3AQ96N28 172 aa11.44□□□□□ -0.58
SPAST-201ENST00000315285 FER1L5A0AVI2 2057 aa11.44□□□□□ -0.58
SPAST-201ENST00000315285 LILRA1O75019 489 aa11.44□□□□□ -0.58
SPAST-201ENST00000315285 HGFACQ04756 655 aa11.44□□□□□ -0.58
SPAST-201ENST00000315285 TEX38Q6PEX7 206 aa11.44□□□□□ -0.58
SPAST-201ENST00000315285 ARPC1AQ92747 370 aa11.44□□□□□ -0.58
SPAST-201ENST00000315285 PARD6GQ9BYG4 376 aaPredicted RBP11.44□□□□□ -0.58
SPAST-201ENST00000315285 OSTCQ9NRP0 149 aa11.44□□□□□ -0.58
SPAST-201ENST00000315285 F11RQ9Y624 299 aaKnown RBP11.44□□□□□ -0.58
SPAST-201ENST00000315285 IGHV3-49A0A0A0MS15 119 aa11.43□□□□□ -0.58
SPAST-201ENST00000315285 APOHP02749 345 aaPredicted RBP11.43□□□□□ -0.58
SPAST-201ENST00000315285 PYYP10082 97 aa11.43□□□□□ -0.58
SPAST-201ENST00000315285 RNFT1Q5M7Z0 435 aa11.43□□□□□ -0.58
SPAST-201ENST00000315285 TRBV6-6A0A0A6YYG2 114 aa11.43□□□□□ -0.58
SPAST-201ENST00000315285 IGHV1-46P01743 117 aa11.43□□□□□ -0.58
SPAST-201ENST00000315285 PDLIM4P50479 330 aa11.43□□□□□ -0.58
SPAST-201ENST00000315285 GNG5P63218 68 aa11.43□□□□□ -0.58
SPAST-201ENST00000315285 CIARTQ8N365 385 aaPredicted RBP11.43□□□□□ -0.58
SPAST-201ENST00000315285 NEU4Q8WWR8 484 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms