RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 GDF15Q99988 308 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 KLF2Q9Y5W3 355 aaPredicted RBP7.43□□□□□ -1.22
COL6A5-202ENST00000312481 MOGAT3Q86VF5 341 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 MUC6Q6W4X9 2439 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 HRKO00198 91 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 MMDQ15546 238 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 A0A1W2PR77 199 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 UMODP07911 640 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 R3HDMLQ9H3Y0 253 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 A0A1B0GV90 55 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 LYZL6O75951 148 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 CRYGSP22914 178 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 Q8NFD4 153 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 UBTD1Q9HAC8 227 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.43□□□□□ -1.22
COL6A5-202ENST00000312481 UCN2Q96RP3 112 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 TMUB1Q9BVT8 246 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 PLA2G2FQ9BZM2 168 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 R4GN57 208 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 PPIHO43447 177 aaKnown RBP7.42□□□□□ -1.22
COL6A5-202ENST00000312481 MAGEA5P43359 124 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 SPRED2Q7Z698 418 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 RFLNBQ8N5W9 214 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 MGST2Q99735 147 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 MOB4Q9Y3A3 225 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 NDUFB8O95169 186 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 OR9G9P0C7N8 305 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 RPRMLQ8N4K4 120 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 OR8A1Q8NGG7 326 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 ATP6V0BQ99437 205 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 HIVEP3Q5T1R4 2406 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 TINAGQ9UJW2 476 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 RNF115Q9Y4L5 304 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 SHISA9B4DS77 424 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.42□□□□□ -1.22
COL6A5-202ENST00000312481 SIVA1O15304 175 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 LGALS3P17931 250 aaKnown RBP7.42□□□□□ -1.22
COL6A5-202ENST00000312481 MINOS1Q5TGZ0 78 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 MINOS1-NBL1R4GNA1 71 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 SCGB1A1P11684 91 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 ZNF124Q15973 351 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 FLVCR1-AS1Q8TAF5 88 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 GDF9O60383 454 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 Q5BKY6 102 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 ZNF788Q6ZQV5 615 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 H3BQ85 93 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 EAF1Q96JC9 268 aaPredicted RBP7.42□□□□□ -1.22
COL6A5-202ENST00000312481 ANOS1P23352 680 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 SNAI3Q3KNW1 292 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 SPINK14Q6IE38 97 aa7.42□□□□□ -1.22
COL6A5-202ENST00000312481 HIGD1CA8MV81 97 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 SRSF1Q07955 248 aaKnown RBP eCLIP7.41□□□□□ -1.22
COL6A5-202ENST00000312481 CENPVL1A0A0U1RR11 272 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 SHISA3A0PJX4 238 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 ZIC3O60481 467 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 KLK2P20151 261 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 UQCRFS1P47985 274 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 FBXO17Q96EF6 278 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 IL17BQ9UHF5 180 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 TCF21O43680 179 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 TBX6O95947 436 aaPredicted RBP7.41□□□□□ -1.22
COL6A5-202ENST00000312481 ZIC4Q8N9L1 334 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 C8orf46Q8TAG6 207 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 FOXQ1Q9C009 403 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 TLN1Q9Y490 2541 aaKnown RBP7.41□□□□□ -1.22
COL6A5-202ENST00000312481 SRRM5B3KS81 715 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 RUNX1Q01196 453 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 HES7Q9BYE0 225 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 OTOGLQ3ZCN5 2332 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 DPM2O94777 84 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 REG1BP48304 166 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 GATA4P43694 442 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 HES3Q5TGS1 186 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 CENPVQ7Z7K6 275 aaPredicted RBP7.41□□□□□ -1.22
COL6A5-202ENST00000312481 RFESDQ8TAC1 157 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 ZNF492Q9P255 531 aa7.41□□□□□ -1.22
COL6A5-202ENST00000312481 TMEM238C9JI98 176 aa7.4□□□□□ -1.22
COL6A5-202ENST00000312481 CFHR2P36980 270 aa7.4□□□□□ -1.22
COL6A5-202ENST00000312481 MIC13Q5XKP0 118 aa7.4□□□□□ -1.22
COL6A5-202ENST00000312481 PRNTQ86SH4 94 aa7.4□□□□□ -1.22
COL6A5-202ENST00000312481 IL6RP08887 468 aaPredicted RBP7.4□□□□□ -1.22
COL6A5-202ENST00000312481 FBLN7Q53RD9 439 aa7.4□□□□□ -1.22
COL6A5-202ENST00000312481 CCL17Q92583 94 aa7.4□□□□□ -1.22
COL6A5-202ENST00000312481 NRN1Q9NPD7 142 aa7.4□□□□□ -1.22
COL6A5-202ENST00000312481 DPM3Q9P2X0 92 aa7.4□□□□□ -1.22
COL6A5-202ENST00000312481 APOBEC3AP31941 199 aaPredicted RBP7.4□□□□□ -1.22
COL6A5-202ENST00000312481 DUTP33316 252 aaKnown RBP7.4□□□□□ -1.22
COL6A5-202ENST00000312481 WIPF2Q8TF74 440 aaPredicted RBP7.4□□□□□ -1.22
COL6A5-202ENST00000312481 C16orf92Q96LL3 132 aa7.4□□□□□ -1.22
COL6A5-202ENST00000312481 DEFB109BQ30KR1 87 aa7.4□□□□□ -1.22
COL6A5-202ENST00000312481 TM4SF20Q53R12 229 aa7.4□□□□□ -1.22
COL6A5-202ENST00000312481 FABP5P3A8MUU1 101 aa7.4□□□□□ -1.23
COL6A5-202ENST00000312481 AMELYQ99218 206 aa7.4□□□□□ -1.23
COL6A5-202ENST00000312481 ABCA2Q9BZC7 2435 aa7.4□□□□□ -1.23
COL6A5-202ENST00000312481 MUC22E2RYF6 1773 aaPredicted RBP7.4□□□□□ -1.23
COL6A5-202ENST00000312481 NPPCP23582 126 aa7.4□□□□□ -1.23
COL6A5-202ENST00000312481 LINC00305Q7Z4B0 112 aa7.4□□□□□ -1.23
COL6A5-202ENST00000312481 GPR183P32249 361 aa7.4□□□□□ -1.23
COL6A5-202ENST00000312481 PCP4P48539 62 aa7.4□□□□□ -1.23
COL6A5-202ENST00000312481 SUPT4H1P63272 117 aaKnown RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms