RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 SSX3Q99909 188 aa9.08□□□□□ -0.96
CTDSPL-202ENST00000310189 SLC25A33Q9BSK2 321 aa9.08□□□□□ -0.96
CTDSPL-202ENST00000310189 ACTR3CQ9C0K3 210 aaPredicted RBP9.08□□□□□ -0.96
CTDSPL-202ENST00000310189 THYN1Q9P016 225 aa9.08□□□□□ -0.96
CTDSPL-202ENST00000310189 MOB4Q9Y3A3 225 aa9.08□□□□□ -0.96
CTDSPL-202ENST00000310189 F11RQ9Y624 299 aaKnown RBP9.08□□□□□ -0.96
CTDSPL-202ENST00000310189 MED13LQ71F56 2210 aa9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 BAHCC1Q9P281 2608 aa9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 ASH1LQ9NR48 2969 aaKnown RBP9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 A0A1W2PPV4 95 aa9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 CGB1A6NKQ9 187 aa9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 E7EUB6 86 aa9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 SCGB2A1O75556 95 aa9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 M6PRP20645 277 aa9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 MRGPRG-AS1Q2M3A8 158 aa9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 C16orf82Q7Z2V1 217 aa9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 OR10G4Q8NGN3 311 aa9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 OR10G9Q8NGN4 311 aa9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 OR10G7Q8NGN6 311 aa9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 SFT2D1Q8WV19 159 aa9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 TMEM170AQ8WVE7 144 aa9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 ACY3Q96HD9 319 aa9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 TMEM68Q96MH6 324 aa9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 RBM14Q96PK6 669 aaKnown RBP9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 PDZD2O15018 2839 aa9.07□□□□□ -0.96
CTDSPL-202ENST00000310189 TNCP24821 2201 aa9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 MFSD2BA6NFX1 497 aa9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 TEX22C9J3V5 150 aa9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 KRBOX1C9JBD0 128 aa9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 SMAD7O15105 426 aaKnown RBP9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 AGPAT2O15120 278 aa9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 MT-CO2P00403 227 aa9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 IFNA1P01562 189 aa9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 FABP1P07148 127 aa9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 APELAP0DMC3 54 aa9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 AREGP15514 252 aa9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 MDKP21741 143 aaPredicted RBP9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 GAMTQ14353 236 aa9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 PEA15Q15121 130 aa9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 ARSJQ5FYB0 599 aaPredicted RBP9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 Q8N9W7 124 aa9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 NARS2Q96I59 477 aaKnown RBP9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 AJUBAQ96IF1 538 aa9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 WNT10AQ9GZT5 417 aa9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 TREM1Q9NP99 234 aa9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 PXMP4Q9Y6I8 212 aa9.06□□□□□ -0.96
CTDSPL-202ENST00000310189 ITPR2Q14571 2701 aa9.05□□□□□ -0.96
CTDSPL-202ENST00000310189 ZFP92A6NM28 416 aa9.05□□□□□ -0.96
CTDSPL-202ENST00000310189 NPIPB5A8MRT5 1133 aa9.05□□□□□ -0.96
CTDSPL-202ENST00000310189 HIST1H1BP16401 226 aaKnown RBP9.05□□□□□ -0.96
CTDSPL-202ENST00000310189 RPL29P47914 159 aaKnown RBP9.05□□□□□ -0.96
CTDSPL-202ENST00000310189 SELENOTP62341 195 aa9.05□□□□□ -0.96
CTDSPL-202ENST00000310189 C19orf24Q9BVV8 132 aa9.05□□□□□ -0.96
CTDSPL-202ENST00000310189 EIF5A2Q9GZV4 153 aaKnown RBP9.05□□□□□ -0.96
CTDSPL-202ENST00000310189 RPRMQ9NS64 109 aa9.05□□□□□ -0.96
CTDSPL-202ENST00000310189 ABCA2Q9BZC7 2435 aa9.05□□□□□ -0.96
CTDSPL-202ENST00000310189 CTXND1A0A1B0GTU2 59 aa9.04□□□□□ -0.96
CTDSPL-202ENST00000310189 A0A1B0GW64 132 aa9.04□□□□□ -0.96
CTDSPL-202ENST00000310189 H3BUX3 64 aa9.04□□□□□ -0.96
CTDSPL-202ENST00000310189 CTRB1P17538 263 aa9.04□□□□□ -0.96
CTDSPL-202ENST00000310189 FHITP49789 147 aa9.04□□□□□ -0.96
CTDSPL-202ENST00000310189 B2MP61769 119 aa9.04□□□□□ -0.96
CTDSPL-202ENST00000310189 KLF17Q5JT82 389 aaPredicted RBP9.04□□□□□ -0.96
CTDSPL-202ENST00000310189 CTRB2Q6GPI1 263 aa9.04□□□□□ -0.96
CTDSPL-202ENST00000310189 CIARTQ8N365 385 aaPredicted RBP9.04□□□□□ -0.96
CTDSPL-202ENST00000310189 TTC9CQ8N5M4 171 aa9.04□□□□□ -0.96
CTDSPL-202ENST00000310189 LYPD6BQ8NI32 183 aa9.04□□□□□ -0.96
CTDSPL-202ENST00000310189 MGST2Q99735 147 aa9.04□□□□□ -0.96
CTDSPL-202ENST00000310189 TMUB1Q9BVT8 246 aa9.04□□□□□ -0.96
CTDSPL-202ENST00000310189 GGTLC1Q9BX51 225 aa9.04□□□□□ -0.96
CTDSPL-202ENST00000310189 PLA2G2EQ9NZK7 142 aa9.04□□□□□ -0.96
CTDSPL-202ENST00000310189 LSM4Q9Y4Z0 139 aaKnown RBP9.04□□□□□ -0.96
CTDSPL-202ENST00000310189 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.04□□□□□ -0.968e-8■■□□□ 14.2
CTDSPL-202ENST00000310189 TRAV1-1A0A0B4J248 108 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 MAP1LC3B2A6NCE7 125 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 OR10J1P30954 320 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 TAGLN2P37802 199 aaKnown RBP9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 CDC34P49427 236 aaPredicted RBP9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 PPT1P50897 306 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 RND2P52198 227 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 RHOBP62745 196 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 C9orf152Q5JTZ5 239 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 ACSM6Q6P461 480 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 FAM122CQ6P4D5 195 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 UNQ5815/PRO19632Q6UWF5 114 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 RBMS3Q6XE24 437 aaKnown RBP9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 C5orf56Q8N8D9 126 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 OR5R1Q8NH85 324 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 OR2T6Q8NHC8 308 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 MBD3L1Q8WWY6 194 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 NPIPB3Q92617 1050 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 RNF2Q99496 336 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 FAM103A1Q9BTL3 118 aaKnown RBP9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 MAP1LC3BQ9GZQ8 125 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 SMDT1Q9H4I9 107 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 RFNGQ9Y644 331 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 CSMD1Q96PZ7 3565 aa9.03□□□□□ -0.96
CTDSPL-202ENST00000310189 IGHV7-81A0A0B4J1V7 117 aa9.02□□□□□ -0.96
CTDSPL-202ENST00000310189 A0A1B0GV50 99 aa9.02□□□□□ -0.96
CTDSPL-202ENST00000310189 ANKRD34BA5PLL1 514 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms