RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 PI3P19957 117 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 SRSF3P84103 164 aaKnown RBP5□□□□□ -1.61
SEC22A-201ENST00000309934 C5orf64Q2M2E5 130 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 HDHD3Q9BSH5 251 aaPredicted RBP5□□□□□ -1.61
SEC22A-201ENST00000309934 C19orf24Q9BVV8 132 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 GCM1Q9NP62 436 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 ONECUT1Q9UBC0 465 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 DPRXA6NFQ7 191 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 VENTXO95231 258 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 CT45A6P0DMU7 189 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 CT45A5P0DMU8 189 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 CT45A7P0DMV0 189 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 ZNF90Q03938 601 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 GAGE2BQ13066 116 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 CD300EQ496F6 205 aaPredicted RBP5□□□□□ -1.61
SEC22A-201ENST00000309934 GAGE2EQ4V326 116 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 CT45A1Q5HYN5 189 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 ATOH7Q8N100 152 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 KIR3DL3Q8N743 410 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 C5orf17Q8NAS9 161 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 OR10G4Q8NGN3 311 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 OR5B3Q8NH48 314 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 CT45A3Q8NHU0 189 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 LYPD6BQ8NI32 183 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 RNASEH2CQ8TDP1 164 aaKnown RBP5□□□□□ -1.61
SEC22A-201ENST00000309934 LHX4Q969G2 390 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 C18orf12Q96KH6 178 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 P2RX4Q99571 388 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 GAGE2DQ9UEU5 116 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 TIMM9Q9Y5J7 89 aa5□□□□□ -1.61
SEC22A-201ENST00000309934 SPTAN1Q13813 2472 aaKnown RBP4.99□□□□□ -1.61
SEC22A-201ENST00000309934 H3BUT2 72 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 ZG16O60844 167 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 SRSF2Q01130 221 aaKnown RBP4.99□□□□□ -1.61
SEC22A-201ENST00000309934 Q56UQ5 140 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 ZNF826PQ6ZT77 177 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 STPG4Q8N801 248 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 OR4C13Q8NGP0 309 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 ABHD5Q8WTS1 349 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 Q8WTZ3 238 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 PARP11Q9NR21 331 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 SLC39A9Q9NUM3 307 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 RELNP78509 3460 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 CHD3Q12873 2000 aaKnown RBP4.99□□□□□ -1.61
SEC22A-201ENST00000309934 MLNRO43193 412 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 G6PCP35575 357 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 PDCD1Q15116 288 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 PMCHL1Q16048 86 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 ZNF506Q5JVG8 444 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 SLC25A34Q6PIV7 304 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 BTNL8Q6UX41 500 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 CCL19Q99731 98 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 TMEM204Q9BSN7 226 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 INSIG2Q9Y5U4 225 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 V9GYY9 64 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 NCOR2Q9Y618 2525 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 ZNF469Q96JG9 3925 aaPredicted RBP4.99□□□□□ -1.61
SEC22A-201ENST00000309934 RBFOX3A6NFN3 312 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 FREM3P0C091 2139 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 HIST1H1EP10412 219 aaKnown RBP4.99□□□□□ -1.61
SEC22A-201ENST00000309934 RPL32P62910 135 aaKnown RBP4.99□□□□□ -1.61
SEC22A-201ENST00000309934 MINOS1Q5TGZ0 78 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 Q6ZVH6 145 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 LINC00311Q8N616 119 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 DRAM1Q8N682 238 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 OR1L4Q8NGR5 311 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 OR1L1Q8NH94 360 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 MINOS1-NBL1R4GNA1 71 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 A0A1B0GWB2 263 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 OR4C46A6NHA9 309 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 H0YL77 283 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 ANOS1P23352 680 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 GATA3P23771 443 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 PSMB3P49720 205 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 LCN2P80188 198 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 SLC38A11Q08AI6 406 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 ZNF816Q0VGE8 651 aaPredicted RBP4.99□□□□□ -1.61
SEC22A-201ENST00000309934 LRRC75BQ2VPJ9 315 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 ANXA2RQ3ZCQ2 193 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 PCSK4Q6UW60 755 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 MOB3BQ86TA1 216 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 OR5A1Q8NGJ0 315 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 LINC01560Q8TB33 94 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 PLPPR1Q8TBJ4 325 aa4.99□□□□□ -1.61
SEC22A-201ENST00000309934 RPUSD1Q9UJJ7 312 aaKnown RBP4.99□□□□□ -1.61
SEC22A-201ENST00000309934 CACNA1DQ01668 2161 aa4.98□□□□□ -1.61
SEC22A-201ENST00000309934 IGHV3OR15-7A0A075B7D8 119 aa4.98□□□□□ -1.61
SEC22A-201ENST00000309934 NKX2-6A6NCS4 301 aa4.98□□□□□ -1.61
SEC22A-201ENST00000309934 NPIPB5A8MRT5 1133 aa4.98□□□□□ -1.61
SEC22A-201ENST00000309934 OR11H12B2RN74 326 aa4.98□□□□□ -1.61
SEC22A-201ENST00000309934 LYL1P12980 280 aa4.98□□□□□ -1.61
SEC22A-201ENST00000309934 ADCYAP1P18509 176 aa4.98□□□□□ -1.61
SEC22A-201ENST00000309934 PPP1CCP36873 323 aaKnown RBP4.98□□□□□ -1.61
SEC22A-201ENST00000309934 GLIPR1P48060 266 aa4.98□□□□□ -1.61
SEC22A-201ENST00000309934 SPANXN5Q5MJ07 72 aa4.98□□□□□ -1.61
SEC22A-201ENST00000309934 DCAF12L2Q5VW00 463 aa4.98□□□□□ -1.61
SEC22A-201ENST00000309934 LCN15Q6UWW0 184 aa4.98□□□□□ -1.61
SEC22A-201ENST00000309934 ZNF818PQ6ZRF7 136 aa4.98□□□□□ -1.61
SEC22A-201ENST00000309934 Q8NA96 180 aa4.98□□□□□ -1.61
SEC22A-201ENST00000309934 OR11H1Q8NG94 326 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms