RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 ADMP35318 185 aa11.39□□□□□ -0.59
TRIM56-201ENST00000306085 NANOS3P60323 173 aaKnown RBP11.39□□□□□ -0.59
TRIM56-201ENST00000306085 RIF1Q5UIP0 2472 aaKnown RBP11.39□□□□□ -0.59
TRIM56-201ENST00000306085 TRAV9-2A0A087WT02 112 aa11.39□□□□□ -0.59
TRIM56-201ENST00000306085 GTSCR1Q86UQ5 136 aa11.39□□□□□ -0.59
TRIM56-201ENST00000306085 ZPLD1Q8TCW7 415 aa11.39□□□□□ -0.59
TRIM56-201ENST00000306085 SCARF2Q96GP6 870 aaPredicted RBP11.39□□□□□ -0.59
TRIM56-201ENST00000306085 FBXL7Q9UJT9 491 aa11.39□□□□□ -0.59
TRIM56-201ENST00000306085 IL6RP08887 468 aaPredicted RBP11.39□□□□□ -0.59
TRIM56-201ENST00000306085 PSMG4Q5JS54 123 aa11.39□□□□□ -0.59
TRIM56-201ENST00000306085 FAM57AQ8TBR7 257 aa11.39□□□□□ -0.59
TRIM56-201ENST00000306085 TCRBV5S1A1TA0A578 114 aa11.39□□□□□ -0.59
TRIM56-201ENST00000306085 PDLIM4P50479 330 aa11.39□□□□□ -0.59
TRIM56-201ENST00000306085 OR52E5Q8NH55 327 aa11.39□□□□□ -0.59
TRIM56-201ENST00000306085 RPRMQ9NS64 109 aa11.39□□□□□ -0.59
TRIM56-201ENST00000306085 A0A1W2PQD3 144 aa11.38□□□□□ -0.59
TRIM56-201ENST00000306085 C21orf140B9A014 251 aa11.38□□□□□ -0.59
TRIM56-201ENST00000306085 GNG5P63218 68 aa11.38□□□□□ -0.59
TRIM56-201ENST00000306085 GP6Q9HCN6 339 aa11.38□□□□□ -0.59
TRIM56-201ENST00000306085 IGHV3-73A0A0B4J1V6 119 aa11.38□□□□□ -0.59
TRIM56-201ENST00000306085 ATP5IP56385 69 aaPredicted RBP11.38□□□□□ -0.59
TRIM56-201ENST00000306085 DEFB104AQ8WTQ1 72 aa11.38□□□□□ -0.59
TRIM56-201ENST00000306085 OVOL2Q9BRP0 275 aa11.38□□□□□ -0.59
TRIM56-201ENST00000306085 HMGA2P52926 109 aa11.38□□□□□ -0.59
TRIM56-201ENST00000306085 HSD52Q0P140 79 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 ATP5L2Q7Z4Y8 100 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 FAM60AQ9NP50 221 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 PSG4Q00888 419 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 FOXL1Q12952 345 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 RICTORQ6R327 1708 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 H2BFSP57053 126 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 A8MXK9 166 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 AQP3Q92482 292 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 DNAJC30Q96LL9 226 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 A0A1W2PPC1 479 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 HS3ST3B1Q9Y662 390 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 IGHV5-10-1A0A0J9YXX1 117 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 IGFBP2P18065 325 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 LAGE3Q14657 143 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 ORMDL2Q53FV1 153 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 TMEM91Q6ZNR0 172 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 IGKV1D-33P01593 117 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 IGKV1-33P01594 117 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 CCL4P13236 92 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 LTBRP36941 435 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 TCTEX1D4Q5JR98 221 aa11.37□□□□□ -0.59
TRIM56-201ENST00000306085 PRB1P04280 392 aa11.36□□□□□ -0.59
TRIM56-201ENST00000306085 OR9G1Q8NH87 305 aa11.36□□□□□ -0.59
TRIM56-201ENST00000306085 WFDC12Q8WWY7 111 aa11.36□□□□□ -0.59
TRIM56-201ENST00000306085 PSME4Q14997 1843 aa11.36□□□□□ -0.59
TRIM56-201ENST00000306085 PLXND1Q9Y4D7 1925 aa11.36□□□□□ -0.59
TRIM56-201ENST00000306085 SFXN3Q9BWM7 321 aa11.36□□□□□ -0.59
TRIM56-201ENST00000306085 CCL1P22362 96 aa11.36□□□□□ -0.59
TRIM56-201ENST00000306085 OTOGLQ3ZCN5 2332 aa11.36□□□□□ -0.59
TRIM56-201ENST00000306085 IFNL4K9M1U5 179 aa11.36□□□□□ -0.59
TRIM56-201ENST00000306085 RNF115Q9Y4L5 304 aa11.36□□□□□ -0.59
TRIM56-201ENST00000306085 SVIPQ8NHG7 77 aa11.36□□□□□ -0.59
TRIM56-201ENST00000306085 ARPC1AQ92747 370 aa11.36□□□□□ -0.59
TRIM56-201ENST00000306085 DLL3Q9NYJ7 618 aa11.36□□□□□ -0.59
TRIM56-201ENST00000306085 NDUFS5O43920 106 aa11.36□□□□□ -0.59
TRIM56-201ENST00000306085 RAMP1O60894 148 aa11.36□□□□□ -0.59
TRIM56-201ENST00000306085 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.35□□□□□ -0.59
TRIM56-201ENST00000306085 H3BMM0 161 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 SRD5A1P18405 259 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 UBE2WQ96B02 151 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 hADV29S1A0JD25 119 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 TCRAP04437 139 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 FAM214BQ7L5A3 538 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 TMEM174Q8WUU8 243 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 HELZP42694 1942 aaKnown RBP11.35□□□□□ -0.59
TRIM56-201ENST00000306085 UCP3P55916 312 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 C3orf36Q3SXR2 165 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 SNHG12Q9BXW3 62 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 A0A087WX48 190 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 NDUFA2O43678 99 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 IGHV3-11P01762 117 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 C9orf40Q8IXQ3 194 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 GATAD1Q8WUU5 269 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 NRTNQ99748 197 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 PEMTQ9UBM1 199 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 TRACP01848 142 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 LCNL1Q6ZST4 164 aa11.35□□□□□ -0.59
TRIM56-201ENST00000306085 LSM4Q9Y4Z0 139 aaKnown RBP11.35□□□□□ -0.59
TRIM56-201ENST00000306085 PRB4P10163 310 aaPredicted RBP11.34□□□□□ -0.59
TRIM56-201ENST00000306085 XIRP1Q702N8 1843 aaKnown RBP11.34□□□□□ -0.59
TRIM56-201ENST00000306085 C21orf62Q9NYP8 219 aa11.34□□□□□ -0.59
TRIM56-201ENST00000306085 VN1R4Q7Z5H5 301 aa11.34□□□□□ -0.59
TRIM56-201ENST00000306085 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.34□□□□□ -0.59
TRIM56-201ENST00000306085 FAM27BQ5VT28 67 aa11.34□□□□□ -0.59
TRIM56-201ENST00000306085 PLA2G2FQ9BZM2 168 aa11.34□□□□□ -0.59
TRIM56-201ENST00000306085 PARP14Q460N5 1801 aa11.34□□□□□ -0.59
TRIM56-201ENST00000306085 IGLV3-25P01717 112 aa11.34□□□□□ -0.59
TRIM56-201ENST00000306085 ASCL2Q99929 193 aa11.34□□□□□ -0.59
TRIM56-201ENST00000306085 PPIFP30405 207 aaKnown RBP11.34□□□□□ -0.59
TRIM56-201ENST00000306085 ATP5G3P48201 142 aa11.34□□□□□ -0.59
TRIM56-201ENST00000306085 AGRNO00468 2067 aa11.34□□□□□ -0.59
TRIM56-201ENST00000306085 PTGDSP41222 190 aa11.33□□□□□ -0.6
TRIM56-201ENST00000306085 NHLRC3Q5JS37 347 aa11.33□□□□□ -0.6
TRIM56-201ENST00000306085 PPP1R27Q86WC6 154 aa11.33□□□□□ -0.6
TRIM56-201ENST00000306085 PKD1L3Q7Z443 1732 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms