RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 SCGB2A2Q13296 93 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 OR1N2Q8NGR9 330 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 CLEC5AQ9NY25 188 aa9.06□□□□□ -0.96
LSM3-201ENST00000306024 NPY1RP25929 384 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 HTR1DP28221 377 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 COMPP49747 757 aaPredicted RBP9.05□□□□□ -0.96
LSM3-201ENST00000306024 GNG3P63215 75 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 PAX2Q02962 417 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 FAM162BQ5T6X4 162 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 MIC13Q5XKP0 118 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 OR4A16Q8NH70 328 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 OR2D2Q9H210 308 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 IL36GQ9NZH8 169 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 OR1A1Q9P1Q5 309 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 A6NDN8 102 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 SPRY3O43610 288 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 NPPCP23582 126 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 TCTAP57738 103 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 RHOBP62745 196 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 LTC4SQ16873 150 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 PRAMEF5Q5TYX0 476 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 PRAMEF6Q5VXH4 476 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 TRAT1Q6PIZ9 186 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 CENPVQ7Z7K6 275 aaPredicted RBP9.05□□□□□ -0.96
LSM3-201ENST00000306024 OR2Z1Q8NG97 314 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 RNASE7Q9H1E1 156 aaKnown RBP9.05□□□□□ -0.96
LSM3-201ENST00000306024 GTSF1LQ9H1H1 148 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 PRORYQ9H606 182 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 HIVEP3Q5T1R4 2406 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 TMPRSS2O15393 492 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 MLNRO43193 412 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 YPEL1O60688 119 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 ERVK-16P61578 105 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 IGFBP7Q16270 282 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 CENPWQ5EE01 88 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 IBA57Q5T440 356 aaKnown RBP9.05□□□□□ -0.96
LSM3-201ENST00000306024 FER1L6-AS1Q8NA97 138 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 OR5A2Q8NGI9 324 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 LINC01560Q8TB33 94 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 TSKUQ8WUA8 353 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 ZDHHC16Q969W1 377 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 YPEL2Q96QA6 119 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 SSBP3Q9BWW4 388 aaPredicted RBP9.05□□□□□ -0.96
LSM3-201ENST00000306024 C1QTNF5Q9BXJ0 243 aa9.05□□□□□ -0.96
LSM3-201ENST00000306024 H3BUT2 72 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 ISLRO14498 428 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 CD3EP07766 207 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 PSG5Q15238 335 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 SEM1Q6ZVN7 128 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 OR1B1Q8NGR6 318 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 TP53TG3Q9ULZ0 132 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 CPAMD8Q8IZJ3 1885 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 hDV102S1A0JD36 115 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 LEPROTL1O95214 131 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 WNT2P09544 360 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 HIST1H1EP10412 219 aaKnown RBP9.04□□□□□ -0.96
LSM3-201ENST00000306024 GNLYP22749 145 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 CRYBB3P26998 211 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 LGALS4P56470 323 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 MPC1Q9Y5U8 109 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 A0A087X0K7 114 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 ZNF503-AS2A6NEH8 195 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 MORN2Q502X0 79 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 ZNF488Q96MN9 340 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 MAP1LC3CQ9BXW4 147 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 RNF114Q9Y508 228 aa9.04□□□□□ -0.96
LSM3-201ENST00000306024 FAM90A26D6RGX4 464 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 PPOXP50336 477 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 TNXAQ16473 311 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 NHLRC2Q8NBF2 726 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 KLF14Q8TD94 323 aaPredicted RBP9.03□□□□□ -0.96
LSM3-201ENST00000306024 hCG_38984A0A1B0GV85 526 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 FAM181BA6NEQ2 426 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 IGKV1-5P01602 117 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 CSN3P07498 182 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 GPR6P46095 362 aaPredicted RBP9.03□□□□□ -0.96
LSM3-201ENST00000306024 MUC15Q8N387 334 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 EAF1Q96JC9 268 aaPredicted RBP9.03□□□□□ -0.96
LSM3-201ENST00000306024 SSUH2Q9Y2M2 353 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 POLDIP2Q9Y2S7 368 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 MYO18BQ8IUG5 2567 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 OR10J4P0C629 311 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 FRMD6-AS1P0C7T7 363 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 CTRLP40313 264 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 OR4S2Q8NH73 311 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 OR1L1Q8NH94 360 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 ZC2HC1AQ96GY0 325 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 PMCHL2Q9BQD1 86 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 MED13LQ71F56 2210 aa9.03□□□□□ -0.96
LSM3-201ENST00000306024 ESDP10768 282 aa9.02□□□□□ -0.96
LSM3-201ENST00000306024 AESQ08117 197 aa9.02□□□□□ -0.96
LSM3-201ENST00000306024 WDR31Q8NA23 367 aa9.02□□□□□ -0.96
LSM3-201ENST00000306024 REPIN1Q9BWE0 567 aaKnown RBP9.02□□□□□ -0.96
LSM3-201ENST00000306024 GCHFRP30047 84 aa9.02□□□□□ -0.97
LSM3-201ENST00000306024 GPR183P32249 361 aa9.02□□□□□ -0.97
LSM3-201ENST00000306024 FOXA3P55318 350 aaPredicted RBP9.02□□□□□ -0.97
LSM3-201ENST00000306024 ARF6P62330 175 aa9.02□□□□□ -0.97
LSM3-201ENST00000306024 FAM71F2Q6NXP2 309 aa9.02□□□□□ -0.97
LSM3-201ENST00000306024 C16orf54Q6UWD8 224 aa9.02□□□□□ -0.97
LSM3-201ENST00000306024 SSC4DQ8WTU2 575 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms