RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 PALMDQ9NP74 551 aa12.91□□□□□ -0.34
NDUFA3-201ENST00000303553 PTTG2Q9NZH5 202 aa12.91□□□□□ -0.34
NDUFA3-201ENST00000303553 LINC00854A0A1B0GVQ3 168 aa12.9□□□□□ -0.34
NDUFA3-201ENST00000303553 K7EIM0 57 aa12.9□□□□□ -0.34
NDUFA3-201ENST00000303553 HLA-AP01891 365 aaKnown RBP12.9□□□□□ -0.34
NDUFA3-201ENST00000303553 SMCO1Q147U7 214 aa12.9□□□□□ -0.34
NDUFA3-201ENST00000303553 Q56UQ5 140 aa12.9□□□□□ -0.34
NDUFA3-201ENST00000303553 DEFB121Q5J5C9 76 aa12.9□□□□□ -0.34
NDUFA3-201ENST00000303553 LCN12Q6JVE5 192 aa12.9□□□□□ -0.34
NDUFA3-201ENST00000303553 Q6ZRM9 215 aa12.9□□□□□ -0.34
NDUFA3-201ENST00000303553 OR2K2Q8NGT1 345 aa12.9□□□□□ -0.34
NDUFA3-201ENST00000303553 TXN2Q99757 166 aa12.9□□□□□ -0.34
NDUFA3-201ENST00000303553 OR2T8A6NH00 312 aa12.89□□□□□ -0.35
NDUFA3-201ENST00000303553 CEBPZOSA8MTT3 80 aa12.89□□□□□ -0.35
NDUFA3-201ENST00000303553 A8MWP6 167 aa12.89□□□□□ -0.35
NDUFA3-201ENST00000303553 SFT2D2O95562 160 aa12.89□□□□□ -0.35
NDUFA3-201ENST00000303553 CSN3P07498 182 aa12.89□□□□□ -0.35
NDUFA3-201ENST00000303553 FCGR2BP31994 310 aaPredicted RBP12.89□□□□□ -0.35
NDUFA3-201ENST00000303553 HTR2BP41595 481 aa12.89□□□□□ -0.35
NDUFA3-201ENST00000303553 PPP1R1AQ13522 171 aa12.89□□□□□ -0.35
NDUFA3-201ENST00000303553 NMSQ5H8A3 153 aa12.89□□□□□ -0.35
NDUFA3-201ENST00000303553 LYZL2Q7Z4W2 148 aa12.89□□□□□ -0.35
NDUFA3-201ENST00000303553 LRTM2Q8N967 370 aa12.89□□□□□ -0.35
NDUFA3-201ENST00000303553 UBAC2Q8NBM4 344 aa12.89□□□□□ -0.35
NDUFA3-201ENST00000303553 DYNLRB2Q8TF09 96 aa12.89□□□□□ -0.35
NDUFA3-201ENST00000303553 PINX1Q96BK5 328 aaKnown RBP12.89□□□□□ -0.35
NDUFA3-201ENST00000303553 PRR25Q96S07 402 aa12.89□□□□□ -0.35
NDUFA3-201ENST00000303553 HIPK2Q9H2X6 1198 aa12.89□□□□□ -0.35
NDUFA3-201ENST00000303553 PRR13Q9NZ81 148 aa12.89□□□□□ -0.35
NDUFA3-201ENST00000303553 A0A1B0GU03 582 aa12.88□□□□□ -0.35
NDUFA3-201ENST00000303553 ZNF320A2RRD8 509 aa12.88□□□□□ -0.35
NDUFA3-201ENST00000303553 NUPL2O15504 423 aaKnown RBP12.88□□□□□ -0.35
NDUFA3-201ENST00000303553 SCGB2A1O75556 95 aa12.88□□□□□ -0.35
NDUFA3-201ENST00000303553 MT-CO2P00403 227 aa12.88□□□□□ -0.35
NDUFA3-201ENST00000303553 GP9P14770 177 aa12.88□□□□□ -0.35
NDUFA3-201ENST00000303553 SPNP16150 400 aa12.88□□□□□ -0.35
NDUFA3-201ENST00000303553 MFAP4P55083 255 aa12.88□□□□□ -0.35
NDUFA3-201ENST00000303553 IL34Q6ZMJ4 242 aa12.88□□□□□ -0.35
NDUFA3-201ENST00000303553 NOXA1Q86UR1 476 aa12.88□□□□□ -0.35
NDUFA3-201ENST00000303553 WDR12Q9GZL7 423 aaKnown RBP12.88□□□□□ -0.35
NDUFA3-201ENST00000303553 HEYLQ9NQ87 328 aaPredicted RBP12.88□□□□□ -0.35
NDUFA3-201ENST00000303553 UFC1Q9Y3C8 167 aa12.88□□□□□ -0.35
NDUFA3-201ENST00000303553 TMED3Q9Y3Q3 217 aa12.88□□□□□ -0.35
NDUFA3-201ENST00000303553 IGHV3-21A0A0B4J1V1 117 aa12.87□□□□□ -0.35
NDUFA3-201ENST00000303553 C2orf70A6NJV1 201 aa12.87□□□□□ -0.35
NDUFA3-201ENST00000303553 I3L2K1 104 aa12.87□□□□□ -0.35
NDUFA3-201ENST00000303553 LYRM1O43325 122 aa12.87□□□□□ -0.35
NDUFA3-201ENST00000303553 RNASE2P10153 161 aaKnown RBP12.87□□□□□ -0.35
NDUFA3-201ENST00000303553 ELLP55199 621 aaPredicted RBP12.87□□□□□ -0.35
NDUFA3-201ENST00000303553 RELQ04864 619 aaPredicted RBP12.87□□□□□ -0.35
NDUFA3-201ENST00000303553 DUSP18Q8NEJ0 188 aa12.87□□□□□ -0.35
NDUFA3-201ENST00000303553 OR1S1Q8NH92 325 aa12.87□□□□□ -0.35
NDUFA3-201ENST00000303553 MARC2Q969Z3 335 aa12.87□□□□□ -0.35
NDUFA3-201ENST00000303553 ZNF436Q9C0F3 470 aaPredicted RBP12.87□□□□□ -0.35
NDUFA3-201ENST00000303553 ZC4H2Q9NQZ6 224 aa12.87□□□□□ -0.35
NDUFA3-201ENST00000303553 TECRQ9NZ01 308 aaKnown RBP12.87□□□□□ -0.35
NDUFA3-201ENST00000303553 RPS10-NUDT3A0A1W2PQS6 291 aa12.86□□□□□ -0.35
NDUFA3-201ENST00000303553 NDUFA4O00483 81 aa12.86□□□□□ -0.35
NDUFA3-201ENST00000303553 GNG7O60262 68 aa12.86□□□□□ -0.35
NDUFA3-201ENST00000303553 SLC25A6P12236 298 aa12.86□□□□□ -0.35
NDUFA3-201ENST00000303553 BTCP35070 178 aa12.86□□□□□ -0.35
NDUFA3-201ENST00000303553 NPBWR1P48145 328 aa12.86□□□□□ -0.35
NDUFA3-201ENST00000303553 TNFRSF9Q07011 255 aa12.86□□□□□ -0.35
NDUFA3-201ENST00000303553 BSXQ3C1V8 233 aa12.86□□□□□ -0.35
NDUFA3-201ENST00000303553 ANKRD55Q3KP44 614 aa12.86□□□□□ -0.35
NDUFA3-201ENST00000303553 PVRIGQ6DKI7 326 aa12.86□□□□□ -0.35
NDUFA3-201ENST00000303553 SLC24A4Q8NFF2 622 aa12.86□□□□□ -0.35
NDUFA3-201ENST00000303553 COQ8AQ8NI60 647 aa12.86□□□□□ -0.35
NDUFA3-201ENST00000303553 HSPB7Q9UBY9 170 aa12.86□□□□□ -0.35
NDUFA3-201ENST00000303553 SORL1Q92673 2214 aa12.86□□□□□ -0.35
NDUFA3-201ENST00000303553 FOLR2P14207 255 aa12.85□□□□□ -0.35
NDUFA3-201ENST00000303553 OPRK1P41145 380 aa12.85□□□□□ -0.35
NDUFA3-201ENST00000303553 ZNF846Q147U1 533 aa12.85□□□□□ -0.35
NDUFA3-201ENST00000303553 C4orf46Q504U0 113 aa12.85□□□□□ -0.35
NDUFA3-201ENST00000303553 HAPLN4Q86UW8 402 aa12.85□□□□□ -0.35
NDUFA3-201ENST00000303553 TMEM190Q8WZ59 177 aa12.85□□□□□ -0.35
NDUFA3-201ENST00000303553 SMAD5-AS1Q9Y6J3 95 aa12.85□□□□□ -0.35
NDUFA3-201ENST00000303553 DNAH3Q8TD57 4116 aa12.84□□□□□ -0.35
NDUFA3-201ENST00000303553 TMEM213A2RRL7 107 aa12.84□□□□□ -0.35
NDUFA3-201ENST00000303553 C9orf170A2RU37 121 aa12.84□□□□□ -0.35
NDUFA3-201ENST00000303553 FAM90A26D6RGX4 464 aa12.84□□□□□ -0.35
NDUFA3-201ENST00000303553 F8W735 103 aaPredicted RBP12.84□□□□□ -0.35
NDUFA3-201ENST00000303553 OR4E1P0C645 316 aa12.84□□□□□ -0.35
NDUFA3-201ENST00000303553 CBLN1P23435 193 aa12.84□□□□□ -0.35
NDUFA3-201ENST00000303553 C2orf83Q53S99 150 aa12.84□□□□□ -0.35
NDUFA3-201ENST00000303553 LYG2Q86SG7 212 aa12.84□□□□□ -0.35
NDUFA3-201ENST00000303553 GTSCR1Q86UQ5 136 aa12.84□□□□□ -0.35
NDUFA3-201ENST00000303553 RNASEH2CQ8TDP1 164 aaKnown RBP12.84□□□□□ -0.35
NDUFA3-201ENST00000303553 DTD1Q8TEA8 209 aa12.84□□□□□ -0.35
NDUFA3-201ENST00000303553 C20orf85Q9H1P6 137 aa12.84□□□□□ -0.35
NDUFA3-201ENST00000303553 DAZ1Q9NQZ3 744 aaKnown RBP12.84□□□□□ -0.35
NDUFA3-201ENST00000303553 LSM4Q9Y4Z0 139 aaKnown RBP12.84□□□□□ -0.35
NDUFA3-201ENST00000303553 PLA2G10O15496 165 aa12.83□□□□□ -0.36
NDUFA3-201ENST00000303553 MED6O75586 246 aa12.83□□□□□ -0.36
NDUFA3-201ENST00000303553 NXPH3O95157 252 aa12.83□□□□□ -0.36
NDUFA3-201ENST00000303553 CTSGP08311 255 aa12.83□□□□□ -0.36
NDUFA3-201ENST00000303553 NPY1RP25929 384 aa12.83□□□□□ -0.36
NDUFA3-201ENST00000303553 ATP5IP56385 69 aaPredicted RBP12.83□□□□□ -0.36
NDUFA3-201ENST00000303553 CD69Q07108 199 aa12.83□□□□□ -0.36
NDUFA3-201ENST00000303553 DHRS2Q13268 280 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms