RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 UQCRFS1P47985 274 aa11.05□□□□□ -0.64
CASC4-201ENST00000299957 MORN2Q502X0 79 aa11.05□□□□□ -0.64
CASC4-201ENST00000299957 WDR73Q6P4I2 378 aa11.05□□□□□ -0.64
CASC4-201ENST00000299957 DUX4L9Q6RFH8 374 aaPredicted RBP11.05□□□□□ -0.64
CASC4-201ENST00000299957 SPTBN4Q9H254 2564 aa11.05□□□□□ -0.64
CASC4-201ENST00000299957 K7EQM0 130 aa11.05□□□□□ -0.64
CASC4-201ENST00000299957 MMDQ15546 238 aa11.05□□□□□ -0.64
CASC4-201ENST00000299957 EFNB3Q15768 340 aa11.05□□□□□ -0.64
CASC4-201ENST00000299957 Q6ZPA2 131 aa11.05□□□□□ -0.64
CASC4-201ENST00000299957 CD177Q8N6Q3 437 aa11.05□□□□□ -0.64
CASC4-201ENST00000299957 OR8B2Q96RD0 313 aa11.05□□□□□ -0.64
CASC4-201ENST00000299957 TMEM170AQ8WVE7 144 aa11.04□□□□□ -0.64
CASC4-201ENST00000299957 DNAJC4Q9NNZ3 241 aa11.04□□□□□ -0.64
CASC4-201ENST00000299957 TNFRSF19Q9NS68 423 aa11.04□□□□□ -0.64
CASC4-201ENST00000299957 USP9YO00507 2555 aaPredicted RBP11.04□□□□□ -0.64
CASC4-201ENST00000299957 MPDU1O75352 247 aa11.04□□□□□ -0.64
CASC4-201ENST00000299957 C8orf88P0DMB2 117 aa11.04□□□□□ -0.64
CASC4-201ENST00000299957 TMEM14EPQ6UXP3 125 aa11.04□□□□□ -0.64
CASC4-201ENST00000299957 NAV3Q8IVL0 2385 aa11.04□□□□□ -0.64
CASC4-201ENST00000299957 A0A1W2PN81 502 aa11.04□□□□□ -0.64
CASC4-201ENST00000299957 SP9P0CG40 484 aa11.04□□□□□ -0.64
CASC4-201ENST00000299957 COL8A2P25067 703 aa11.04□□□□□ -0.64
CASC4-201ENST00000299957 CSN1S1P47710 185 aa11.04□□□□□ -0.64
CASC4-201ENST00000299957 ASCL4Q6XD76 172 aa11.04□□□□□ -0.64
CASC4-201ENST00000299957 ADTRPQ96IZ2 230 aa11.04□□□□□ -0.64
CASC4-201ENST00000299957 NDUFAF3Q9BU61 184 aa11.04□□□□□ -0.64
CASC4-201ENST00000299957 GGTLC1Q9BX51 225 aa11.04□□□□□ -0.64
CASC4-201ENST00000299957 WDR83OSQ9Y284 106 aa11.04□□□□□ -0.64
CASC4-201ENST00000299957 ABCA2Q9BZC7 2435 aa11.03□□□□□ -0.64
CASC4-201ENST00000299957 TMEM177Q53S58 311 aa11.03□□□□□ -0.64
CASC4-201ENST00000299957 TCF24Q7RTU0 167 aa11.03□□□□□ -0.64
CASC4-201ENST00000299957 WFDC3Q8IUB2 231 aa11.03□□□□□ -0.64
CASC4-201ENST00000299957 MRPL20Q9BYC9 149 aaKnown RBP11.03□□□□□ -0.64
CASC4-201ENST00000299957 BET1LQ9NYM9 111 aa11.03□□□□□ -0.64
CASC4-201ENST00000299957 PPIAL4EA0A075B759 164 aa11.03□□□□□ -0.64
CASC4-201ENST00000299957 IGKV3D-15A0A087WSY6 115 aa11.03□□□□□ -0.64
CASC4-201ENST00000299957 PPIAL4DF5H284 164 aa11.03□□□□□ -0.64
CASC4-201ENST00000299957 PPIAL4FP0DN26 164 aa11.03□□□□□ -0.64
CASC4-201ENST00000299957 TEX38Q6PEX7 206 aa11.03□□□□□ -0.64
CASC4-201ENST00000299957 FOXL2NBQ6ZUU3 175 aa11.03□□□□□ -0.64
CASC4-201ENST00000299957 SSC4DQ8WTU2 575 aa11.03□□□□□ -0.64
CASC4-201ENST00000299957 ZNF714Q96N38 554 aa11.03□□□□□ -0.64
CASC4-201ENST00000299957 GSX1Q9H4S2 264 aaPredicted RBP11.03□□□□□ -0.64
CASC4-201ENST00000299957 M0QZ24 198 aa11.03□□□□□ -0.64
CASC4-201ENST00000299957 HOXB1P14653 301 aaPredicted RBP11.03□□□□□ -0.64
CASC4-201ENST00000299957 ACP1P24666 158 aa11.03□□□□□ -0.64
CASC4-201ENST00000299957 RPRMLQ8N4K4 120 aa11.03□□□□□ -0.64
CASC4-201ENST00000299957 JPT1Q9UK76 154 aa11.03□□□□□ -0.64
CASC4-201ENST00000299957 C15orf62A8K5M9 175 aa11.02□□□□□ -0.64
CASC4-201ENST00000299957 IGLV3-1P01715 115 aa11.02□□□□□ -0.64
CASC4-201ENST00000299957 IGHV3-23P01764 117 aa11.02□□□□□ -0.64
CASC4-201ENST00000299957 KIR2DS2P43631 304 aa11.02□□□□□ -0.64
CASC4-201ENST00000299957 TAS2R60P59551 318 aa11.02□□□□□ -0.64
CASC4-201ENST00000299957 ZCCHC14Q8WYQ9 949 aaKnown RBP11.02□□□□□ -0.64
CASC4-201ENST00000299957 IQCF6A8MYZ5 107 aa11.02□□□□□ -0.65
CASC4-201ENST00000299957 C16orf97H3BN30 126 aa11.02□□□□□ -0.65
CASC4-201ENST00000299957 RELBQ01201 579 aa11.02□□□□□ -0.65
CASC4-201ENST00000299957 MGST2Q99735 147 aa11.02□□□□□ -0.65
CASC4-201ENST00000299957 YTHDF2Q9Y5A9 579 aaKnown RBP11.02□□□□□ -0.65
CASC4-201ENST00000299957 IGHV3-49A0A0A0MS15 119 aa11.02□□□□□ -0.65
CASC4-201ENST00000299957 GOLT1AQ6ZVE7 132 aa11.02□□□□□ -0.65
CASC4-201ENST00000299957 LINC00305Q7Z4B0 112 aa11.02□□□□□ -0.65
CASC4-201ENST00000299957 AGMATQ9BSE5 352 aa11.02□□□□□ -0.65
CASC4-201ENST00000299957 VENTXO95231 258 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 IGKV1-16P04430 117 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 CRIP3Q6Q6R5 217 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 COLCA1Q6ZS62 124 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 DPRXA6NFQ7 191 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 SAA1P0DJI8 122 aaPredicted RBP11.01□□□□□ -0.65
CASC4-201ENST00000299957 RBPJQ06330 500 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 COL5A1-AS1Q5SY13 56 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 RASL11BQ9BPW5 248 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 SEBOXQ9HB31 216 aaPredicted RBP11.01□□□□□ -0.65
CASC4-201ENST00000299957 TMEM106BQ9NUM4 274 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 IDI2-AS1Q9NZ38 188 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 IL36BQ9NZH7 164 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 ZNF785A8K8V0 405 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 MAS1LP35410 378 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 ARF6P62330 175 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 ZNF146Q15072 292 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 OR5R1Q8NH85 324 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 KCNS1Q96KK3 526 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 NRN1Q9NPD7 142 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 IGHV1-18A0A0C4DH31 117 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 PFN1P07737 140 aaKnown RBP11.01□□□□□ -0.65
CASC4-201ENST00000299957 KIR2DL2P43627 348 aaPredicted RBP11.01□□□□□ -0.65
CASC4-201ENST00000299957 RPL27AP46776 148 aaKnown RBP11.01□□□□□ -0.65
CASC4-201ENST00000299957 PAFAH1B2P68402 229 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 OR4F17Q8NGA8 305 aa11.01□□□□□ -0.65
CASC4-201ENST00000299957 MRPL37Q9BZE1 423 aaKnown RBP11.01□□□□□ -0.65
CASC4-201ENST00000299957 FRYQ5TBA9 3013 aa11□□□□□ -0.65
CASC4-201ENST00000299957 GNG7O60262 68 aa11□□□□□ -0.65
CASC4-201ENST00000299957 HYPMO75409 117 aa11□□□□□ -0.65
CASC4-201ENST00000299957 S100A7P31151 101 aa11□□□□□ -0.65
CASC4-201ENST00000299957 ORM1P02763 201 aa11□□□□□ -0.65
CASC4-201ENST00000299957 HIST1H1EP10412 219 aaKnown RBP11□□□□□ -0.65
CASC4-201ENST00000299957 TMUB1Q9BVT8 246 aa11□□□□□ -0.65
CASC4-201ENST00000299957 TRAV1-1A0A0B4J248 108 aa11□□□□□ -0.65
CASC4-201ENST00000299957 GCSAMQ8N6F7 178 aa11□□□□□ -0.65
CASC4-201ENST00000299957 VSTM2AQ8TAG5 236 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms