RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 ASXL3Q9C0F0 2248 aa12.51□□□□□ -0.41
SCN3B-201ENST00000299333 IGHV1-45A0A0A0MS14 117 aa12.51□□□□□ -0.41
SCN3B-201ENST00000299333 A0A0U1RRA0 63 aa12.51□□□□□ -0.41
SCN3B-201ENST00000299333 ITGBL1O95965 494 aaPredicted RBP12.51□□□□□ -0.41
SCN3B-201ENST00000299333 SRSF1Q07955 248 aaKnown RBP eCLIP12.51□□□□□ -0.41
SCN3B-201ENST00000299333 PYY3Q5JQD4 70 aa12.51□□□□□ -0.41
SCN3B-201ENST00000299333 DMRTC2Q8IXT2 367 aaPredicted RBP12.51□□□□□ -0.41
SCN3B-201ENST00000299333 ZNF501Q96CX3 271 aaPredicted RBP12.51□□□□□ -0.41
SCN3B-201ENST00000299333 TM2D1Q9BX74 207 aa12.51□□□□□ -0.41
SCN3B-201ENST00000299333 PILRAQ9UKJ1 303 aa12.51□□□□□ -0.41
SCN3B-201ENST00000299333 SLC25A20O43772 301 aa12.51□□□□□ -0.41
SCN3B-201ENST00000299333 CCL21O00585 134 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 SCARF2Q96GP6 870 aaPredicted RBP12.5□□□□□ -0.41
SCN3B-201ENST00000299333 OSTCQ9NRP0 149 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 H0YIZ8 118 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 EGR4Q05215 589 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 CHCHD1Q96BP2 118 aaKnown RBP12.5□□□□□ -0.41
SCN3B-201ENST00000299333 C18orf12Q96KH6 178 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 DEPPQ9NTK1 212 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 NKX2-8O15522 239 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 IGHMP01871 453 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 PRR31Q5SQ13 230 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 CFAP161Q6P656 301 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 BCL6BQ8N143 479 aaPredicted RBP12.5□□□□□ -0.41
SCN3B-201ENST00000299333 IFI27L1Q96BM0 104 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 FBXL15Q9H469 300 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 MYO7AQ13402 2215 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 A0A087X0K7 114 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 PLNP26678 52 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 IFI27P40305 119 aaPredicted RBP12.5□□□□□ -0.41
SCN3B-201ENST00000299333 PSG3Q16557 428 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 CD300EQ496F6 205 aaPredicted RBP12.5□□□□□ -0.41
SCN3B-201ENST00000299333 GTSCR1Q86UQ5 136 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 SVIPQ8NHG7 77 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 MS4A6AQ9H2W1 248 aa12.5□□□□□ -0.41
SCN3B-201ENST00000299333 NDUFC2O95298 119 aa12.49□□□□□ -0.41
SCN3B-201ENST00000299333 CD55P08174 381 aa12.49□□□□□ -0.41
SCN3B-201ENST00000299333 WFDC1Q9HC57 220 aa12.49□□□□□ -0.41
SCN3B-201ENST00000299333 SMCHD1A6NHR9 2005 aa12.49□□□□□ -0.41
SCN3B-201ENST00000299333 NDUFA2O43678 99 aa12.49□□□□□ -0.41
SCN3B-201ENST00000299333 C19orf48Q6RUI8 117 aa12.49□□□□□ -0.41
SCN3B-201ENST00000299333 ABHD17AQ96GS6 310 aa12.49□□□□□ -0.41
SCN3B-201ENST00000299333 DUX3Q96PT4 197 aa12.49□□□□□ -0.41
SCN3B-201ENST00000299333 AZU1P20160 251 aa12.49□□□□□ -0.41
SCN3B-201ENST00000299333 TFF2Q03403 129 aa12.49□□□□□ -0.41
SCN3B-201ENST00000299333 C1orf210Q8IVY1 113 aa12.49□□□□□ -0.41
SCN3B-201ENST00000299333 PAPPA2Q9BXP8 1791 aa12.49□□□□□ -0.41
SCN3B-201ENST00000299333 TEX38Q6PEX7 206 aa12.49□□□□□ -0.41
SCN3B-201ENST00000299333 SCN1AP35498 2009 aa12.49□□□□□ -0.41
SCN3B-201ENST00000299333 TUBGCP6Q96RT7 1819 aa12.49□□□□□ -0.41
SCN3B-201ENST00000299333 M0R2P5 195 aa12.48□□□□□ -0.41
SCN3B-201ENST00000299333 CDK5RAP2Q96SN8 1893 aa12.48□□□□□ -0.41
SCN3B-201ENST00000299333 hDV102S1A0JD36 115 aa12.48□□□□□ -0.41
SCN3B-201ENST00000299333 LSM4Q9Y4Z0 139 aaKnown RBP12.48□□□□□ -0.41
SCN3B-201ENST00000299333 MLNRO43193 412 aa12.48□□□□□ -0.41
SCN3B-201ENST00000299333 NPC2P61916 151 aa12.48□□□□□ -0.41
SCN3B-201ENST00000299333 OTORQ9NRC9 128 aa12.48□□□□□ -0.41
SCN3B-201ENST00000299333 PPIFP30405 207 aaKnown RBP12.48□□□□□ -0.41
SCN3B-201ENST00000299333 KIR3DS1Q14943 382 aa12.48□□□□□ -0.41
SCN3B-201ENST00000299333 OR9G4Q8NGQ1 327 aa12.48□□□□□ -0.41
SCN3B-201ENST00000299333 VSIRQ9H7M9 311 aa12.48□□□□□ -0.41
SCN3B-201ENST00000299333 TRBV24-1A0A075B6N3 115 aa12.48□□□□□ -0.41
SCN3B-201ENST00000299333 TRGV3P03979 118 aa12.48□□□□□ -0.41
SCN3B-201ENST00000299333 CD5P06127 495 aa12.48□□□□□ -0.41
SCN3B-201ENST00000299333 FHL5Q5TD97 284 aa12.48□□□□□ -0.41
SCN3B-201ENST00000299333 ZNF664Q8N3J9 261 aa12.48□□□□□ -0.41
SCN3B-201ENST00000299333 IGHV3OR16-10A0A075B7F0 116 aa12.47□□□□□ -0.41
SCN3B-201ENST00000299333 PYYP10082 97 aa12.47□□□□□ -0.41
SCN3B-201ENST00000299333 GUSBP1Q15486 140 aa12.47□□□□□ -0.41
SCN3B-201ENST00000299333 OSR1Q8TAX0 266 aaPredicted RBP12.47□□□□□ -0.41
SCN3B-201ENST00000299333 GAGE12JA6NER3 117 aa12.47□□□□□ -0.41
SCN3B-201ENST00000299333 GAGE7O76087 117 aa12.47□□□□□ -0.41
SCN3B-201ENST00000299333 GAGE12FP0CL80 117 aa12.47□□□□□ -0.41
SCN3B-201ENST00000299333 GAGE12GP0CL81 117 aa12.47□□□□□ -0.41
SCN3B-201ENST00000299333 GAGE12IP0CL82 117 aa12.47□□□□□ -0.41
SCN3B-201ENST00000299333 GAGE4Q13068 117 aa12.47□□□□□ -0.41
SCN3B-201ENST00000299333 CFHR5Q9BXR6 569 aa12.47□□□□□ -0.41
SCN3B-201ENST00000299333 FBXL7Q9UJT9 491 aa12.47□□□□□ -0.41
SCN3B-201ENST00000299333 IGHV1-69-2A0A0G2JMI3 117 aa12.47□□□□□ -0.41
SCN3B-201ENST00000299333 TMEM30BQ3MIR4 351 aa12.47□□□□□ -0.41
SCN3B-201ENST00000299333 TMEM144Q7Z5S9 345 aa12.47□□□□□ -0.41
SCN3B-201ENST00000299333 TMEM54Q969K7 222 aa12.47□□□□□ -0.41
SCN3B-201ENST00000299333 TMEM238C9JI98 176 aa12.47□□□□□ -0.41
SCN3B-201ENST00000299333 PRR33A8MZF0 331 aa12.46□□□□□ -0.41
SCN3B-201ENST00000299333 GAGE5Q13069 117 aa12.46□□□□□ -0.41
SCN3B-201ENST00000299333 GAGE6Q13070 117 aa12.46□□□□□ -0.41
SCN3B-201ENST00000299333 TMEM256Q8N2U0 113 aa12.46□□□□□ -0.41
SCN3B-201ENST00000299333 MARF1Q9Y4F3 1742 aaKnown RBP12.46□□□□□ -0.41
SCN3B-201ENST00000299333 FABP5P3A8MUU1 101 aa12.46□□□□□ -0.41
SCN3B-201ENST00000299333 STARD6P59095 220 aa12.46□□□□□ -0.41
SCN3B-201ENST00000299333 ATP5L2Q7Z4Y8 100 aa12.46□□□□□ -0.41
SCN3B-201ENST00000299333 OR13A1Q8NGR1 328 aa12.46□□□□□ -0.41
SCN3B-201ENST00000299333 TMEM258P61165 79 aa12.46□□□□□ -0.41
SCN3B-201ENST00000299333 MRPL20Q9BYC9 149 aaKnown RBP12.46□□□□□ -0.41
SCN3B-201ENST00000299333 PILRBQ9UKJ0 227 aa12.46□□□□□ -0.41
SCN3B-201ENST00000299333 HAX1O00165 279 aa12.46□□□□□ -0.42
SCN3B-201ENST00000299333 ZXDCQ2QGD7 858 aaPredicted RBP12.46□□□□□ -0.42
SCN3B-201ENST00000299333 LCN12Q6JVE5 192 aa12.46□□□□□ -0.42
SCN3B-201ENST00000299333 TMEM242Q9NWH2 141 aa12.46□□□□□ -0.42
SCN3B-201ENST00000299333 F5P12259 2224 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms