RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 PKDREJQ9NTG1 2253 aa13.41□□□□□ -0.26
ARHGEF28-201ENST00000296794 PLP1P60201 277 aa13.41□□□□□ -0.26
ARHGEF28-201ENST00000296794 RELQ04864 619 aaPredicted RBP13.41□□□□□ -0.26
ARHGEF28-201ENST00000296794 PNRC2Q9NPJ4 139 aaKnown RBP13.41□□□□□ -0.26
ARHGEF28-201ENST00000296794 SCN5AQ14524 2016 aa13.41□□□□□ -0.26
ARHGEF28-201ENST00000296794 PGPEP1LA6NFU8 196 aa13.41□□□□□ -0.26
ARHGEF28-201ENST00000296794 TM4SF5O14894 197 aa13.41□□□□□ -0.26
ARHGEF28-201ENST00000296794 TFF1P04155 84 aa13.41□□□□□ -0.26
ARHGEF28-201ENST00000296794 CX3CL1P78423 397 aa13.41□□□□□ -0.26
ARHGEF28-201ENST00000296794 ATP5G2Q06055 141 aa13.41□□□□□ -0.26
ARHGEF28-201ENST00000296794 RSPO3Q9BXY4 272 aaPredicted RBP13.41□□□□□ -0.26
ARHGEF28-201ENST00000296794 NPIPB11E5RHQ5 1161 aa13.41□□□□□ -0.26
ARHGEF28-201ENST00000296794 ADMP35318 185 aa13.41□□□□□ -0.26
ARHGEF28-201ENST00000296794 DDB2Q92466 427 aa13.41□□□□□ -0.26
ARHGEF28-201ENST00000296794 HIST1H2BLQ99880 126 aa13.41□□□□□ -0.26
ARHGEF28-201ENST00000296794 MRPL20Q9BYC9 149 aaKnown RBP13.4□□□□□ -0.26
ARHGEF28-201ENST00000296794 RNASE7Q9H1E1 156 aaKnown RBP13.4□□□□□ -0.26
ARHGEF28-201ENST00000296794 NUDT3O95989 172 aa13.4□□□□□ -0.26
ARHGEF28-201ENST00000296794 GFI1BQ5VTD9 330 aa13.4□□□□□ -0.26
ARHGEF28-201ENST00000296794 CDKN1AP38936 164 aa13.4□□□□□ -0.26
ARHGEF28-201ENST00000296794 TMEM144Q7Z5S9 345 aa13.4□□□□□ -0.26
ARHGEF28-201ENST00000296794 GCSAMLQ5JQS6 135 aa13.4□□□□□ -0.26
ARHGEF28-201ENST00000296794 MUC6Q6W4X9 2439 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 IGHV3-35A0A0C4DH35 117 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 PINLYPA6NC86 204 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 FAM90A1Q86YD7 464 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 HIST3H2BBQ8N257 126 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 OR52E5Q8NH55 327 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 CACNG8Q8WXS5 425 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 RFNGQ9Y644 331 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 VWA8A3KMH1 1905 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 CADP27708 2225 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 SAA2-SAA4A0A096LPE2 208 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 TMEM238LA0A1B0GVL6 79 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 A6NJY4 79 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 SAA2P0DJI9 122 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 JOSD1Q15040 202 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 WDR82Q6UXN9 313 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 DOCK8Q8NF50 2099 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 TRBV24-1A0A075B6N3 115 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 C7orf71A4D174 169 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 IZUMO1RA6ND01 250 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 YPEL1O60688 119 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 YPEL2Q96QA6 119 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 HIST1H4GQ99525 98 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 MIEN1Q9BRT3 115 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 YAE1D1Q9NRH1 226 aa13.39□□□□□ -0.27
ARHGEF28-201ENST00000296794 A0A1B0GW64 132 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 FOXG1P55316 489 aaPredicted RBP13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 NUP37Q8NFH4 326 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 ST6GALNAC6Q969X2 333 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 NRN1Q9NPD7 142 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 TMEM242Q9NWH2 141 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 C15orf61A6NNL5 157 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 ADCYAP1P18509 176 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 RPP21Q9H633 154 aaKnown RBP13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 LOC107984156A0A0G2JMH3 177 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 SRSF7Q16629 238 aaKnown RBP eCLIP13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 MORN2Q502X0 79 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 RNFT1Q5M7Z0 435 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 ARL17AQ8IVW1 177 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 PMCHL2Q9BQD1 86 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 FBXL15Q9H469 300 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 WDR83OSQ9Y284 106 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 PLXNA3P51805 1871 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 PCP4P48539 62 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 RRN3P1Q2M238 152 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 DMRTA1Q5VZB9 504 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 C1QL4Q86Z23 238 aa13.38□□□□□ -0.27
ARHGEF28-201ENST00000296794 OR9G9P0C7N8 305 aa13.37□□□□□ -0.27
ARHGEF28-201ENST00000296794 SAA1P0DJI8 122 aaPredicted RBP13.37□□□□□ -0.27
ARHGEF28-201ENST00000296794 RAB9AP51151 201 aa13.37□□□□□ -0.27
ARHGEF28-201ENST00000296794 MEF2CQ06413 473 aaPredicted RBP13.37□□□□□ -0.27
ARHGEF28-201ENST00000296794 NMSQ5H8A3 153 aa13.37□□□□□ -0.27
ARHGEF28-201ENST00000296794 GGNQ86UU5 652 aa13.37□□□□□ -0.27
ARHGEF28-201ENST00000296794 ST6GALNAC3Q8NDV1 305 aa13.37□□□□□ -0.27
ARHGEF28-201ENST00000296794 OCC1Q8TAD7 63 aa13.37□□□□□ -0.27
ARHGEF28-201ENST00000296794 SAPCD1Q5SSQ6 148 aa13.37□□□□□ -0.27
ARHGEF28-201ENST00000296794 TMEM136Q6ZRR5 245 aa13.37□□□□□ -0.27
ARHGEF28-201ENST00000296794 PHLDA3Q9Y5J5 127 aa13.37□□□□□ -0.27
ARHGEF28-201ENST00000296794 TRAV1-1A0A0B4J248 108 aa13.37□□□□□ -0.27
ARHGEF28-201ENST00000296794 EEF1AKMT3Q96AZ1 226 aa13.37□□□□□ -0.27
ARHGEF28-201ENST00000296794 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.37□□□□□ -0.271e-6■■■■□ 25.7
ARHGEF28-201ENST00000296794 UPK2O00526 184 aa13.37□□□□□ -0.27
ARHGEF28-201ENST00000296794 RNASEH2CQ8TDP1 164 aaKnown RBP13.37□□□□□ -0.27
ARHGEF28-201ENST00000296794 PRDM13Q9H4Q3 707 aa13.37□□□□□ -0.27
ARHGEF28-201ENST00000296794 HIGD1CA8MV81 97 aa13.36□□□□□ -0.27
ARHGEF28-201ENST00000296794 APOHP02749 345 aaPredicted RBP13.36□□□□□ -0.27
ARHGEF28-201ENST00000296794 PLAURQ03405 335 aa13.36□□□□□ -0.27
ARHGEF28-201ENST00000296794 KLK15Q9H2R5 256 aa13.36□□□□□ -0.27
ARHGEF28-201ENST00000296794 A0A1B0GUT8 65 aa13.36□□□□□ -0.27
ARHGEF28-201ENST00000296794 FOXI3A8MTJ6 420 aaPredicted RBP13.36□□□□□ -0.27
ARHGEF28-201ENST00000296794 DUTP33316 252 aaKnown RBP13.36□□□□□ -0.27
ARHGEF28-201ENST00000296794 ZNF414Q96IQ9 312 aa13.36□□□□□ -0.27
ARHGEF28-201ENST00000296794 SEMA5BQ9P283 1151 aa13.36□□□□□ -0.27
ARHGEF28-201ENST00000296794 WNK2Q9Y3S1 2297 aa13.36□□□□□ -0.27
ARHGEF28-201ENST00000296794 NPPCP23582 126 aa13.36□□□□□ -0.27
ARHGEF28-201ENST00000296794 TIMP3P35625 211 aa13.36□□□□□ -0.27
ARHGEF28-201ENST00000296794 RAX2Q96IS3 184 aa13.36□□□□□ -0.27
ARHGEF28-201ENST00000296794 S4R3C0 116 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms