RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 SPARTQ8N0X7 666 aa6.78□□□□□ -1.32
CNOT9-202ENST00000295701 TMEM217Q8N7C4 229 aa6.78□□□□□ -1.32
CNOT9-202ENST00000295701 TMEM116Q8NCL8 245 aa6.78□□□□□ -1.32
CNOT9-202ENST00000295701 FCAMRQ8WWV6 532 aa6.78□□□□□ -1.32
CNOT9-202ENST00000295701 KRTAP9-8Q9BYQ0 159 aa6.78□□□□□ -1.32
CNOT9-202ENST00000295701 AUNIPQ9H7T9 357 aa6.78□□□□□ -1.32
CNOT9-202ENST00000295701 PLA2G2DQ9UNK4 145 aa6.78□□□□□ -1.32
CNOT9-202ENST00000295701 IGHV3-66A0A0C4DH42 116 aa6.77□□□□□ -1.33
CNOT9-202ENST00000295701 MARCH11A6NNE9 402 aa6.77□□□□□ -1.33
CNOT9-202ENST00000295701 C15orf62A8K5M9 175 aa6.77□□□□□ -1.33
CNOT9-202ENST00000295701 SCGNO76038 276 aa6.77□□□□□ -1.33
CNOT9-202ENST00000295701 RLN1P04808 185 aa6.77□□□□□ -1.33
CNOT9-202ENST00000295701 IFNA4P05014 189 aa6.77□□□□□ -1.33
CNOT9-202ENST00000295701 ERVK-16P61578 105 aa6.77□□□□□ -1.33
CNOT9-202ENST00000295701 RBMS2Q15434 407 aaKnown RBP6.77□□□□□ -1.33
CNOT9-202ENST00000295701 LEMD1Q68G75 181 aa6.77□□□□□ -1.33
CNOT9-202ENST00000295701 TPRA1Q86W33 373 aa6.77□□□□□ -1.33
CNOT9-202ENST00000295701 FAM24BQ8N5W8 94 aa6.77□□□□□ -1.33
CNOT9-202ENST00000295701 OR5AP2Q8NGF4 316 aa6.77□□□□□ -1.33
CNOT9-202ENST00000295701 LSM10Q969L4 123 aaKnown RBP6.77□□□□□ -1.33
CNOT9-202ENST00000295701 EHFQ9NZC4 300 aa6.77□□□□□ -1.33
CNOT9-202ENST00000295701 COMMD9Q9P000 198 aa6.77□□□□□ -1.33
CNOT9-202ENST00000295701 APLNQ9ULZ1 77 aa6.77□□□□□ -1.33
CNOT9-202ENST00000295701 SSR3Q9UNL2 185 aa6.77□□□□□ -1.33
CNOT9-202ENST00000295701 IGLL5B9A064 214 aa6.76□□□□□ -1.33
CNOT9-202ENST00000295701 I3L2K1 104 aa6.76□□□□□ -1.33
CNOT9-202ENST00000295701 NUPL2O15504 423 aaKnown RBP6.76□□□□□ -1.33
CNOT9-202ENST00000295701 CYB5BO43169 146 aa6.76□□□□□ -1.33
CNOT9-202ENST00000295701 CA1P00915 261 aaPredicted RBP6.76□□□□□ -1.33
CNOT9-202ENST00000295701 PMP2P02689 132 aa6.76□□□□□ -1.33
CNOT9-202ENST00000295701 F2RP25116 425 aa6.76□□□□□ -1.33
CNOT9-202ENST00000295701 TGFBR1P36897 503 aa6.76□□□□□ -1.33
CNOT9-202ENST00000295701 HERV-K104P61576 105 aa6.76□□□□□ -1.33
CNOT9-202ENST00000295701 THOC7Q6I9Y2 204 aaKnown RBP6.76□□□□□ -1.33
CNOT9-202ENST00000295701 DHRS11Q6UWP2 260 aa6.76□□□□□ -1.33
CNOT9-202ENST00000295701 TCF24Q7RTU0 167 aa6.76□□□□□ -1.33
CNOT9-202ENST00000295701 C2CD4CQ8TF44 421 aa6.76□□□□□ -1.33
CNOT9-202ENST00000295701 GATAD1Q8WUU5 269 aa6.76□□□□□ -1.33
CNOT9-202ENST00000295701 ST8SIA2Q92186 375 aa6.76□□□□□ -1.33
CNOT9-202ENST00000295701 SLC25A46Q96AG3 418 aa6.76□□□□□ -1.33
CNOT9-202ENST00000295701 DGCR14Q96DF8 476 aaKnown RBP6.76□□□□□ -1.33
CNOT9-202ENST00000295701 OR10C1Q96KK4 312 aa6.76□□□□□ -1.33
CNOT9-202ENST00000295701 ZNF2Q9BSG1 426 aaPredicted RBP6.76□□□□□ -1.33
CNOT9-202ENST00000295701 FXYD6Q9H0Q3 95 aa6.76□□□□□ -1.33
CNOT9-202ENST00000295701 BLOC1S6Q9UL45 172 aa6.76□□□□□ -1.33
CNOT9-202ENST00000295701 TRAV14DV4A0A0A6YYC5 116 aa6.75□□□□□ -1.33
CNOT9-202ENST00000295701 LOC100506127A0A0U1RQW1 187 aa6.75□□□□□ -1.33
CNOT9-202ENST00000295701 SNAPC5O75971 98 aa6.75□□□□□ -1.33
CNOT9-202ENST00000295701 DFFBO76075 338 aa6.75□□□□□ -1.33
CNOT9-202ENST00000295701 MT-CO2P00403 227 aa6.75□□□□□ -1.33
CNOT9-202ENST00000295701 PLA2G1BP04054 148 aaKnown RBP6.75□□□□□ -1.33
CNOT9-202ENST00000295701 FGF2P09038 288 aa6.75□□□□□ -1.33
CNOT9-202ENST00000295701 GIG44P09565 113 aaPredicted RBP6.75□□□□□ -1.33
CNOT9-202ENST00000295701 RBMY1A1P0DJD3 496 aaKnown RBP6.75□□□□□ -1.33
CNOT9-202ENST00000295701 RBMY1CP0DJD4 496 aa6.75□□□□□ -1.33
CNOT9-202ENST00000295701 MFAP4P55083 255 aa6.75□□□□□ -1.33
CNOT9-202ENST00000295701 DEFB131AP59861 70 aa6.75□□□□□ -1.33
CNOT9-202ENST00000295701 GABARAPL2P60520 117 aa6.75□□□□□ -1.33
CNOT9-202ENST00000295701 RBMY1FQ15415 496 aaKnown RBP6.75□□□□□ -1.33
CNOT9-202ENST00000295701 PHLDA2Q53GA4 152 aa6.75□□□□□ -1.33
CNOT9-202ENST00000295701 SPINK9Q5DT21 86 aa6.75□□□□□ -1.33
CNOT9-202ENST00000295701 TOMM20LQ6UXN7 152 aa6.75□□□□□ -1.33
CNOT9-202ENST00000295701 MOB3AQ96BX8 217 aa6.75□□□□□ -1.33
CNOT9-202ENST00000295701 ATP6V0BQ99437 205 aa6.75□□□□□ -1.33
CNOT9-202ENST00000295701 C6orf62Q9GZU0 229 aaPredicted RBP6.75□□□□□ -1.33
CNOT9-202ENST00000295701 NXF2Q9GZY0 626 aaKnown RBP6.75□□□□□ -1.33
CNOT9-202ENST00000295701 MFFQ9GZY8 342 aa6.75□□□□□ -1.33
CNOT9-202ENST00000295701 C11orf68Q9H3H3 251 aaKnown RBP6.75□□□□□ -1.33
CNOT9-202ENST00000295701 C15orf61A6NNL5 157 aa6.74□□□□□ -1.33
CNOT9-202ENST00000295701 XRCC3O43542 346 aa6.74□□□□□ -1.33
CNOT9-202ENST00000295701 IGKV1-39P01597 117 aa6.74□□□□□ -1.33
CNOT9-202ENST00000295701 IGKV1D-39P04432 117 aa6.74□□□□□ -1.33
CNOT9-202ENST00000295701 CBX5P45973 191 aa6.74□□□□□ -1.33
CNOT9-202ENST00000295701 HSPA13P48723 471 aa6.74□□□□□ -1.33
CNOT9-202ENST00000295701 RELQ04864 619 aaPredicted RBP6.74□□□□□ -1.33
CNOT9-202ENST00000295701 TMEM187Q14656 261 aa6.74□□□□□ -1.33
CNOT9-202ENST00000295701 IZUMO4Q1ZYL8 232 aa6.74□□□□□ -1.33
CNOT9-202ENST00000295701 HSD17B13Q7Z5P4 300 aaPredicted RBP6.74□□□□□ -1.33
CNOT9-202ENST00000295701 Q8NAQ8 132 aa6.74□□□□□ -1.33
CNOT9-202ENST00000295701 OR1P1Q8NH06 330 aa6.74□□□□□ -1.33
CNOT9-202ENST00000295701 PINX1Q96BK5 328 aaKnown RBP6.74□□□□□ -1.33
CNOT9-202ENST00000295701 TMEM56Q96MV1 263 aa6.74□□□□□ -1.33
CNOT9-202ENST00000295701 MS4A6AQ9H2W1 248 aa6.74□□□□□ -1.33
CNOT9-202ENST00000295701 IFT46Q9NQC8 304 aa6.74□□□□□ -1.33
CNOT9-202ENST00000295701 DIABLOQ9NR28 239 aa6.74□□□□□ -1.33
CNOT9-202ENST00000295701 TMEM14BQ9NUH8 114 aa6.74□□□□□ -1.33
CNOT9-202ENST00000295701 ANAPC10Q9UM13 185 aa6.74□□□□□ -1.33
CNOT9-202ENST00000295701 A0A0A6YYH2 397 aa6.73□□□□□ -1.33
CNOT9-202ENST00000295701 IGHV4-28A0A0C4DH34 117 aa6.73□□□□□ -1.33
CNOT9-202ENST00000295701 A6NJ64 397 aa6.73□□□□□ -1.33
CNOT9-202ENST00000295701 DNASE2O00115 360 aaPredicted RBP6.73□□□□□ -1.33
CNOT9-202ENST00000295701 GPR31O00270 319 aa6.73□□□□□ -1.33
CNOT9-202ENST00000295701 ST8SIA3O43173 380 aa6.73□□□□□ -1.33
CNOT9-202ENST00000295701 GNG7O60262 68 aa6.73□□□□□ -1.33
CNOT9-202ENST00000295701 MRPS14O60783 128 aaKnown RBP6.73□□□□□ -1.33
CNOT9-202ENST00000295701 CMC4P56277 68 aaPredicted RBP6.73□□□□□ -1.33
CNOT9-202ENST00000295701 LYSMD2Q8IV50 215 aa6.73□□□□□ -1.33
CNOT9-202ENST00000295701 TSPAN14Q8NG11 270 aa6.73□□□□□ -1.33
CNOT9-202ENST00000295701 SEC22AQ96IW7 307 aa6.73□□□□□ -1.33
CNOT9-202ENST00000295701 CMTM3Q96MX0 182 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms