RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 DFFBO76075 338 aa11.93□□□□□ -0.5
CCDC140-201ENST00000295226 REG1AP05451 166 aa11.93□□□□□ -0.5
CCDC140-201ENST00000295226 MAS1LP35410 378 aa11.93□□□□□ -0.5
CCDC140-201ENST00000295226 TNFRSF9Q07011 255 aa11.93□□□□□ -0.5
CCDC140-201ENST00000295226 STX12Q86Y82 276 aa11.93□□□□□ -0.5
CCDC140-201ENST00000295226 LURAP1LQ8IV03 231 aa11.93□□□□□ -0.5
CCDC140-201ENST00000295226 GNPNAT1Q96EK6 184 aaPredicted RBP11.93□□□□□ -0.5
CCDC140-201ENST00000295226 NARS2Q96I59 477 aaKnown RBP11.93□□□□□ -0.5
CCDC140-201ENST00000295226 RBKSQ9H477 322 aa11.93□□□□□ -0.5
CCDC140-201ENST00000295226 NDUFA4L2Q9NRX3 87 aa11.93□□□□□ -0.5
CCDC140-201ENST00000295226 FAM24AA6NFZ4 105 aa11.92□□□□□ -0.5
CCDC140-201ENST00000295226 APOC3P02656 99 aa11.92□□□□□ -0.5
CCDC140-201ENST00000295226 IAPPP10997 89 aa11.92□□□□□ -0.5
CCDC140-201ENST00000295226 AREGP15514 252 aa11.92□□□□□ -0.5
CCDC140-201ENST00000295226 NHLH2Q02577 135 aa11.92□□□□□ -0.5
CCDC140-201ENST00000295226 ECSCRQ19T08 205 aa11.92□□□□□ -0.5
CCDC140-201ENST00000295226 ASPHD1Q5U4P2 390 aa11.92□□□□□ -0.5
CCDC140-201ENST00000295226 BTNL8Q6UX41 500 aa11.92□□□□□ -0.5
CCDC140-201ENST00000295226 HSPB7Q9UBY9 170 aa11.92□□□□□ -0.5
CCDC140-201ENST00000295226 IGSF23A1L1A6 192 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 CEBPZOSA8MTT3 80 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 SPCS3P61009 180 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 PRCDQ00LT1 54 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 AARDQ4LEZ3 155 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 Q6ZRG5 221 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 SVBPQ8N300 66 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 OR5T1Q8NG75 326 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 OR5B3Q8NH48 314 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 HRH4Q9H3N8 390 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 WFDC1Q9HC57 220 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 ZNF257Q9Y2Q1 563 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 SYNGR2O43760 224 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 HOXA1P49639 335 aaPredicted RBP11.91□□□□□ -0.5
CCDC140-201ENST00000295226 SULT1A1P50225 295 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 WT1-ASQ06250 92 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 C10orf91Q5T1B1 145 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 UNQ5815/PRO19632Q6UWF5 114 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 C10orf99Q6UWK7 81 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 SGMS2Q8NHU3 365 aa11.91□□□□□ -0.5
CCDC140-201ENST00000295226 CARHSP1Q9Y2V2 147 aaKnown RBP11.91□□□□□ -0.5
CCDC140-201ENST00000295226 IGLC7A0M8Q6 106 aa11.9□□□□□ -0.5
CCDC140-201ENST00000295226 TSPAN9O75954 239 aa11.9□□□□□ -0.5
CCDC140-201ENST00000295226 LY86O95711 162 aa11.9□□□□□ -0.5
CCDC140-201ENST00000295226 OR13C7P0DN81 318 aa11.9□□□□□ -0.5
CCDC140-201ENST00000295226 VDAC2P45880 294 aaPredicted RBP11.9□□□□□ -0.5
CCDC140-201ENST00000295226 Q8N2B8 174 aa11.9□□□□□ -0.5
CCDC140-201ENST00000295226 OR52E5Q8NH55 327 aa11.9□□□□□ -0.5
CCDC140-201ENST00000295226 BSCL2Q96G97 398 aaPredicted RBP11.9□□□□□ -0.5
CCDC140-201ENST00000295226 SEC11CQ9BY50 192 aa11.9□□□□□ -0.5
CCDC140-201ENST00000295226 PLEKHA3Q9HB20 300 aa11.9□□□□□ -0.5
CCDC140-201ENST00000295226 SERTAD4Q9NUC0 356 aa11.9□□□□□ -0.5
CCDC140-201ENST00000295226 CACFD1Q9UGQ2 172 aa11.9□□□□□ -0.5
CCDC140-201ENST00000295226 SCO1O75880 301 aa11.89□□□□□ -0.51
CCDC140-201ENST00000295226 SCAF4O95104 1147 aaKnown RBP11.89□□□□□ -0.51
CCDC140-201ENST00000295226 TSPAN15O95858 294 aa11.89□□□□□ -0.51
CCDC140-201ENST00000295226 PRH1P02810 166 aa11.89□□□□□ -0.51
CCDC140-201ENST00000295226 CAMLGP49069 296 aa11.89□□□□□ -0.51
CCDC140-201ENST00000295226 DPPA3Q6W0C5 159 aa11.89□□□□□ -0.51
CCDC140-201ENST00000295226 ZNF329Q86UD4 541 aa11.89□□□□□ -0.51
CCDC140-201ENST00000295226 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.89□□□□□ -0.51
CCDC140-201ENST00000295226 OR5C1Q8NGR4 320 aa11.89□□□□□ -0.51
CCDC140-201ENST00000295226 OR2T6Q8NHC8 308 aa11.89□□□□□ -0.51
CCDC140-201ENST00000295226 ATP5SQ99766 215 aa11.89□□□□□ -0.51
CCDC140-201ENST00000295226 TREM1Q9NP99 234 aa11.89□□□□□ -0.51
CCDC140-201ENST00000295226 UQCC1Q9NVA1 299 aa11.89□□□□□ -0.51
CCDC140-201ENST00000295226 TRAV41A0A0B4J266 112 aa11.88□□□□□ -0.51
CCDC140-201ENST00000295226 AP4M1O00189 453 aa11.88□□□□□ -0.51
CCDC140-201ENST00000295226 TMEM50AO95807 157 aa11.88□□□□□ -0.51
CCDC140-201ENST00000295226 IGF1P05019 195 aa11.88□□□□□ -0.51
CCDC140-201ENST00000295226 PAX9P55771 341 aa11.88□□□□□ -0.51
CCDC140-201ENST00000295226 HBG1P69891 147 aa11.88□□□□□ -0.51
CCDC140-201ENST00000295226 HBG2P69892 147 aa11.88□□□□□ -0.51
CCDC140-201ENST00000295226 DEFA5Q01523 94 aa11.88□□□□□ -0.51
CCDC140-201ENST00000295226 PDLIM3Q53GG5 364 aaPredicted RBP11.88□□□□□ -0.51
CCDC140-201ENST00000295226 HSD17B11Q8NBQ5 300 aa11.88□□□□□ -0.51
CCDC140-201ENST00000295226 LINC01006Q8NI28 216 aa11.88□□□□□ -0.51
CCDC140-201ENST00000295226 DTD1Q8TEA8 209 aa11.88□□□□□ -0.51
CCDC140-201ENST00000295226 SMDT1Q9H4I9 107 aa11.88□□□□□ -0.51
CCDC140-201ENST00000295226 ENY2Q9NPA8 101 aa11.88□□□□□ -0.51
CCDC140-201ENST00000295226 HEYLQ9NQ87 328 aaPredicted RBP11.88□□□□□ -0.51
CCDC140-201ENST00000295226 ATRQ13535 2644 aa11.88□□□□□ -0.51
CCDC140-201ENST00000295226 A0A1W2PN81 502 aa11.87□□□□□ -0.51
CCDC140-201ENST00000295226 F8W036 122 aa11.87□□□□□ -0.51
CCDC140-201ENST00000295226 H3BP45 60 aa11.87□□□□□ -0.51
CCDC140-201ENST00000295226 SOX15O60248 233 aa11.87□□□□□ -0.51
CCDC140-201ENST00000295226 IFNA5P01569 189 aa11.87□□□□□ -0.51
CCDC140-201ENST00000295226 CD5P06127 495 aa11.87□□□□□ -0.51
CCDC140-201ENST00000295226 CHRNA7P36544 502 aa11.87□□□□□ -0.51
CCDC140-201ENST00000295226 RPL15P61313 204 aaKnown RBP11.87□□□□□ -0.51
CCDC140-201ENST00000295226 CLINT1Q14677 625 aa11.87□□□□□ -0.51
CCDC140-201ENST00000295226 HIST2H2BDQ6DRA6 164 aa11.87□□□□□ -0.51
CCDC140-201ENST00000295226 TMA7Q9Y2S6 64 aaKnown RBP11.87□□□□□ -0.51
CCDC140-201ENST00000295226 MDKP21741 143 aaPredicted RBP11.87□□□□□ -0.51
CCDC140-201ENST00000295226 ATP6V0CP27449 155 aa11.87□□□□□ -0.51
CCDC140-201ENST00000295226 PEA15Q15121 130 aa11.87□□□□□ -0.51
CCDC140-201ENST00000295226 C19orf54Q5BKX5 351 aa11.87□□□□□ -0.51
CCDC140-201ENST00000295226 LCNL1Q6ZST4 164 aa11.87□□□□□ -0.51
CCDC140-201ENST00000295226 OR2G3Q8NGZ4 309 aa11.87□□□□□ -0.51
CCDC140-201ENST00000295226 PBDC1Q9BVG4 233 aa11.87□□□□□ -0.51
CCDC140-201ENST00000295226 NKX6-2Q9C056 277 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms