RNA–Protein interactions for RNA: ENST00000294161.10

TTC9C-201, Transcript of tetratricopeptide repeat domain 9C, humanhuman

TSL 1 (best)

Gene TTC9C, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-201ENST00000294161 DEFA4P12838 97 aa11.96□□□□□ -0.49
TTC9C-201ENST00000294161 OR10J1P30954 320 aa11.96□□□□□ -0.49
TTC9C-201ENST00000294161 SSX2Q16385 188 aa11.96□□□□□ -0.49
TTC9C-201ENST00000294161 ETFRF1Q6IPR1 90 aa11.96□□□□□ -0.49
TTC9C-201ENST00000294161 PQLC2Q6ZP29 291 aa11.96□□□□□ -0.49
TTC9C-201ENST00000294161 MMD2Q8IY49 270 aa11.96□□□□□ -0.49
TTC9C-201ENST00000294161 C8orf46Q8TAG6 207 aa11.96□□□□□ -0.49
TTC9C-201ENST00000294161 NEU4Q8WWR8 484 aaPredicted RBP11.96□□□□□ -0.49
TTC9C-201ENST00000294161 IGHV2-26A0A0B4J1V2 119 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 PPIAL4CA0A0B4J2A2 164 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 ACTL6BO94805 426 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 NDUFB4O95168 129 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 IGLV2-23P01705 113 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 PPIAL4GP0DN37 164 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 AREGP15514 252 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 COL8A2P25067 703 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 ATP5G3P48201 142 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 GNB1P62873 340 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 FAM78BQ5VT40 261 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 OR4P4Q8NGL7 312 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 MRPL32Q9BYC8 188 aaKnown RBP11.95□□□□□ -0.5
TTC9C-201ENST00000294161 ZNF430Q9H8G1 570 aaPredicted RBP11.95□□□□□ -0.5
TTC9C-201ENST00000294161 INSIG2Q9Y5U4 225 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 PFN1P07737 140 aaKnown RBP11.95□□□□□ -0.5
TTC9C-201ENST00000294161 SRSF1Q07955 248 aaKnown RBP eCLIP11.95□□□□□ -0.5
TTC9C-201ENST00000294161 C11orf42Q8N5U0 333 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 OR10W1Q8NGF6 305 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 IMMP2LQ96T52 175 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 RNF5Q99942 180 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 PYGO2Q9BRQ0 406 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 SRD5A3Q9H8P0 318 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 SEPSECSQ9HD40 501 aaKnown RBP11.95□□□□□ -0.5
TTC9C-201ENST00000294161 CBLN4Q9NTU7 201 aa11.95□□□□□ -0.5
TTC9C-201ENST00000294161 PPP5D1E7EU14 171 aa11.94□□□□□ -0.5
TTC9C-201ENST00000294161 SLC25A17O43808 307 aa11.94□□□□□ -0.5
TTC9C-201ENST00000294161 LIPFP07098 398 aa11.94□□□□□ -0.5
TTC9C-201ENST00000294161 HOXA5P20719 270 aa11.94□□□□□ -0.5
TTC9C-201ENST00000294161 SELENOTP62341 195 aa11.94□□□□□ -0.5
TTC9C-201ENST00000294161 ZNF841Q6ZN19 808 aa11.94□□□□□ -0.5
TTC9C-201ENST00000294161 ITLN2Q8WWU7 325 aaPredicted RBP11.94□□□□□ -0.5
TTC9C-201ENST00000294161 SSX3Q99909 188 aa11.94□□□□□ -0.5
TTC9C-201ENST00000294161 ELOA3CA0A087WX78 387 aaPredicted RBP11.93□□□□□ -0.5
TTC9C-201ENST00000294161 BUB1B-PAK6H3BSN5 160 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 IGLV1-47P01700 117 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 TRGC2P03986 189 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 OR5G3P0C626 314 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 PLA2G2AP14555 144 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 NPPCP23582 126 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 COMPP49747 757 aaPredicted RBP11.93□□□□□ -0.5
TTC9C-201ENST00000294161 NDUFA6P56556 154 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 DIAPH2-AS1Q14236 149 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 LINC01551Q86U37 167 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 OR51G1Q8NGK1 321 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 OR1L4Q8NGR5 311 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 C22orf15Q8WYQ4 148 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 C11orf52Q96A22 123 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 PFDN5Q99471 154 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 CORTO00230 105 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 SIAH2O43255 324 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 MOB3BQ86TA1 216 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 OR2T10Q8NGZ9 312 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 RPEQ96AT9 228 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 LY96Q9Y6Y9 160 aa11.93□□□□□ -0.5
TTC9C-201ENST00000294161 GCN1Q92616 2671 aaKnown RBP11.92□□□□□ -0.5
TTC9C-201ENST00000294161 MDFIC2A0A1B0GVS7 189 aa11.92□□□□□ -0.5
TTC9C-201ENST00000294161 LYNX1G3V0Z9 82 aa11.92□□□□□ -0.5
TTC9C-201ENST00000294161 LYNX1P0DP58 116 aa11.92□□□□□ -0.5
TTC9C-201ENST00000294161 RPL27AP46776 148 aaKnown RBP11.92□□□□□ -0.5
TTC9C-201ENST00000294161 CDX1P47902 265 aaPredicted RBP11.92□□□□□ -0.5
TTC9C-201ENST00000294161 FAM3BP58499 235 aaPredicted RBP11.92□□□□□ -0.5
TTC9C-201ENST00000294161 BPIFB3P59826 476 aa11.92□□□□□ -0.5
TTC9C-201ENST00000294161 S100A12P80511 92 aa11.92□□□□□ -0.5
TTC9C-201ENST00000294161 PSG5Q15238 335 aa11.92□□□□□ -0.5
TTC9C-201ENST00000294161 PRSS8Q16651 343 aa11.92□□□□□ -0.5
TTC9C-201ENST00000294161 SPATA31B1PQ5VZV4 182 aa11.92□□□□□ -0.5
TTC9C-201ENST00000294161 MIR17HGQ75NE6 70 aa11.92□□□□□ -0.5
TTC9C-201ENST00000294161 ACY3Q96HD9 319 aa11.92□□□□□ -0.5
TTC9C-201ENST00000294161 ARFGEF3Q5TH69 2177 aa11.91□□□□□ -0.5
TTC9C-201ENST00000294161 SPTBN1Q01082 2364 aaKnown RBP11.91□□□□□ -0.5
TTC9C-201ENST00000294161 IGHV1-3A0A0C4DH29 117 aa11.91□□□□□ -0.5
TTC9C-201ENST00000294161 C8orf88P0DMB2 117 aa11.91□□□□□ -0.5
TTC9C-201ENST00000294161 LCN2P80188 198 aa11.91□□□□□ -0.5
TTC9C-201ENST00000294161 WT1-ASQ06250 92 aa11.91□□□□□ -0.5
TTC9C-201ENST00000294161 LY6G5BQ8NDX9 201 aa11.91□□□□□ -0.5
TTC9C-201ENST00000294161 DNAJC4Q9NNZ3 241 aa11.91□□□□□ -0.5
TTC9C-201ENST00000294161 YTHDF2Q9Y5A9 579 aaKnown RBP11.91□□□□□ -0.5
TTC9C-201ENST00000294161 DCHS2Q6V1P9 2916 aa11.91□□□□□ -0.5
TTC9C-201ENST00000294161 LRBAP50851 2863 aa11.91□□□□□ -0.5
TTC9C-201ENST00000294161 C9JCJ5 164 aa11.9□□□□□ -0.5
TTC9C-201ENST00000294161 C19orf84I3L1E1 186 aa11.9□□□□□ -0.5
TTC9C-201ENST00000294161 OR7C2O60412 319 aa11.9□□□□□ -0.5
TTC9C-201ENST00000294161 HIST1H2BKO60814 126 aa11.9□□□□□ -0.5
TTC9C-201ENST00000294161 GGCTO75223 188 aaKnown RBP11.9□□□□□ -0.5
TTC9C-201ENST00000294161 HIST1H2BJP06899 126 aa11.9□□□□□ -0.5
TTC9C-201ENST00000294161 HIST1H2BOP23527 126 aa11.9□□□□□ -0.5
TTC9C-201ENST00000294161 S100A2P29034 98 aa11.9□□□□□ -0.5
TTC9C-201ENST00000294161 HIST1H2BBP33778 126 aa11.9□□□□□ -0.5
TTC9C-201ENST00000294161 HIST1H2BDP58876 126 aa11.9□□□□□ -0.5
TTC9C-201ENST00000294161 HIST1H2BCP62807 126 aa11.9□□□□□ -0.5
TTC9C-201ENST00000294161 HIST2H2BEQ16778 126 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms