RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 RBFOX2O43251 390 aaKnown RBP eCLIP13.08□□□□□ -0.32
SMAD6-201ENST00000288840 PPIHO43447 177 aaKnown RBP13.08□□□□□ -0.32
SMAD6-201ENST00000288840 CSN3P07498 182 aa13.08□□□□□ -0.32
SMAD6-201ENST00000288840 C10orf113Q5VZT2 155 aa13.08□□□□□ -0.32
SMAD6-201ENST00000288840 AGMATQ9BSE5 352 aa13.08□□□□□ -0.32
SMAD6-201ENST00000288840 ASPMQ8IZT6 3477 aa13.08□□□□□ -0.32
SMAD6-201ENST00000288840 C15orf61A6NNL5 157 aa13.08□□□□□ -0.32
SMAD6-201ENST00000288840 LMO1P25800 156 aa13.08□□□□□ -0.32
SMAD6-201ENST00000288840 BRWD1-AS2P59051 145 aa13.08□□□□□ -0.32
SMAD6-201ENST00000288840 ARSJQ5FYB0 599 aaPredicted RBP13.08□□□□□ -0.32
SMAD6-201ENST00000288840 ABHD17AQ96GS6 310 aa13.08□□□□□ -0.32
SMAD6-201ENST00000288840 ZNF355PQ9NSJ1 428 aa13.08□□□□□ -0.32
SMAD6-201ENST00000288840 IGHV2-70P01814 119 aa13.08□□□□□ -0.32
SMAD6-201ENST00000288840 USF1P22415 310 aaPredicted RBP13.08□□□□□ -0.32
SMAD6-201ENST00000288840 NPPCP23582 126 aa13.08□□□□□ -0.32
SMAD6-201ENST00000288840 GPX4P36969 197 aaPredicted RBP13.08□□□□□ -0.32
SMAD6-201ENST00000288840 IBA57Q5T440 356 aaKnown RBP13.08□□□□□ -0.32
SMAD6-201ENST00000288840 FAM19A2Q8N3H0 131 aa13.08□□□□□ -0.32
SMAD6-201ENST00000288840 CACNA1AO00555 2505 aa13.07□□□□□ -0.32
SMAD6-201ENST00000288840 CHD8Q9HCK8 2581 aa13.07□□□□□ -0.32
SMAD6-201ENST00000288840 CD24P25063 80 aa13.07□□□□□ -0.32
SMAD6-201ENST00000288840 KRTCAP3Q53RY4 240 aa13.07□□□□□ -0.32
SMAD6-201ENST00000288840 C1orf162Q8NEQ5 155 aaPredicted RBP13.07□□□□□ -0.32
SMAD6-201ENST00000288840 HCFC1P51610 2035 aa13.07□□□□□ -0.32
SMAD6-201ENST00000288840 UNQ6494/PRO21346Q6UXR6 183 aa13.07□□□□□ -0.32
SMAD6-201ENST00000288840 PAXXQ9BUH6 204 aa13.07□□□□□ -0.32
SMAD6-201ENST00000288840 INSIG2Q9Y5U4 225 aa13.07□□□□□ -0.32
SMAD6-201ENST00000288840 KIAA1549Q9HCM3 1950 aa13.07□□□□□ -0.32
SMAD6-201ENST00000288840 RPEQ96AT9 228 aa13.07□□□□□ -0.32
SMAD6-201ENST00000288840 PRO3102Q9H379 93 aa13.07□□□□□ -0.32
SMAD6-201ENST00000288840 NAGKQ9UJ70 344 aa13.07□□□□□ -0.32
SMAD6-201ENST00000288840 HILPDAQ9Y5L2 63 aa13.07□□□□□ -0.32
SMAD6-201ENST00000288840 CBY3A6NI87 242 aa13.06□□□□□ -0.32
SMAD6-201ENST00000288840 C15orf65H3BRN8 121 aa13.06□□□□□ -0.32
SMAD6-201ENST00000288840 VENTXO95231 258 aa13.06□□□□□ -0.32
SMAD6-201ENST00000288840 IGHG3P01860 377 aa13.06□□□□□ -0.32
SMAD6-201ENST00000288840 PLA2G2CQ5R387 149 aa13.06□□□□□ -0.32
SMAD6-201ENST00000288840 TMEM170AQ8WVE7 144 aa13.06□□□□□ -0.32
SMAD6-201ENST00000288840 SRIP30626 198 aa13.06□□□□□ -0.32
SMAD6-201ENST00000288840 ASCL3Q9NQ33 180 aa13.06□□□□□ -0.32
SMAD6-201ENST00000288840 PROP1O75360 226 aa13.06□□□□□ -0.32
SMAD6-201ENST00000288840 SERF1AO75920 110 aa13.06□□□□□ -0.32
SMAD6-201ENST00000288840 STAG3L2P0CL84 134 aa13.06□□□□□ -0.32
SMAD6-201ENST00000288840 STAG3L3P0CL85 134 aa13.06□□□□□ -0.32
SMAD6-201ENST00000288840 TEX38Q6PEX7 206 aa13.06□□□□□ -0.32
SMAD6-201ENST00000288840 LINC01560Q8TB33 94 aa13.06□□□□□ -0.32
SMAD6-201ENST00000288840 TMEM242Q9NWH2 141 aa13.06□□□□□ -0.32
SMAD6-201ENST00000288840 SPTBN4Q9H254 2564 aa13.06□□□□□ -0.32
SMAD6-201ENST00000288840 COL5A1P20908 1838 aaPredicted RBP13.06□□□□□ -0.32
SMAD6-201ENST00000288840 IGHV3-35A0A0C4DH35 117 aa13.05□□□□□ -0.32
SMAD6-201ENST00000288840 PGPA6NDG6 321 aa13.05□□□□□ -0.32
SMAD6-201ENST00000288840 GNG5P63218 68 aa13.05□□□□□ -0.32
SMAD6-201ENST00000288840 PRR7Q8TB68 274 aa13.05□□□□□ -0.32
SMAD6-201ENST00000288840 C19orf35Q6ZS72 473 aa13.05□□□□□ -0.32
SMAD6-201ENST00000288840 PDPNQ86YL7 162 aa13.05□□□□□ -0.32
SMAD6-201ENST00000288840 NEUROG1Q92886 237 aa13.05□□□□□ -0.32
SMAD6-201ENST00000288840 GSX1Q9H4S2 264 aaPredicted RBP13.05□□□□□ -0.32
SMAD6-201ENST00000288840 DNAJC4Q9NNZ3 241 aa13.05□□□□□ -0.32
SMAD6-201ENST00000288840 COL4A2P08572 1712 aa13.05□□□□□ -0.32
SMAD6-201ENST00000288840 NCBP2LA6PVI3 153 aaKnown RBP13.05□□□□□ -0.32
SMAD6-201ENST00000288840 C8orf88P0DMB2 117 aa13.05□□□□□ -0.32
SMAD6-201ENST00000288840 GZMBP10144 247 aa13.05□□□□□ -0.32
SMAD6-201ENST00000288840 CCKARP32238 428 aa13.05□□□□□ -0.32
SMAD6-201ENST00000288840 GPR6P46095 362 aaPredicted RBP13.05□□□□□ -0.32
SMAD6-201ENST00000288840 RBPJQ06330 500 aa13.05□□□□□ -0.32
SMAD6-201ENST00000288840 AMMECR1Q9Y4X0 333 aaPredicted RBP13.05□□□□□ -0.32
SMAD6-201ENST00000288840 MBNL2Q5VZF2 373 aaKnown RBP13.04□□□□□ -0.32
SMAD6-201ENST00000288840 CT45A6P0DMU7 189 aa13.04□□□□□ -0.32
SMAD6-201ENST00000288840 CT45A5P0DMU8 189 aa13.04□□□□□ -0.32
SMAD6-201ENST00000288840 CT45A7P0DMV0 189 aa13.04□□□□□ -0.32
SMAD6-201ENST00000288840 TCTAP57738 103 aa13.04□□□□□ -0.32
SMAD6-201ENST00000288840 DIAPH2-AS1Q14236 149 aa13.04□□□□□ -0.32
SMAD6-201ENST00000288840 ZNF664Q8N3J9 261 aa13.04□□□□□ -0.32
SMAD6-201ENST00000288840 TNRC6AQ8NDV7 1962 aaKnown RBP13.04□□□□□ -0.32
SMAD6-201ENST00000288840 FOXA3P55318 350 aaPredicted RBP13.04□□□□□ -0.32
SMAD6-201ENST00000288840 JOSD1Q15040 202 aaPredicted RBP13.04□□□□□ -0.32
SMAD6-201ENST00000288840 Q8TCH9 128 aa13.04□□□□□ -0.32
SMAD6-201ENST00000288840 TMSB15BA0A087X1C1 80 aa13.03□□□□□ -0.32
SMAD6-201ENST00000288840 RAB4AP20338 218 aa13.03□□□□□ -0.32
SMAD6-201ENST00000288840 C14orf144Q96I85 54 aa13.03□□□□□ -0.32
SMAD6-201ENST00000288840 WNT10AQ9GZT5 417 aa13.03□□□□□ -0.32
SMAD6-201ENST00000288840 DKK4Q9UBT3 224 aa13.03□□□□□ -0.32
SMAD6-201ENST00000288840 IGHV3OR16-8A0A075B7F1 116 aa13.03□□□□□ -0.32
SMAD6-201ENST00000288840 TEX50A0A1B0GTY4 177 aa13.03□□□□□ -0.32
SMAD6-201ENST00000288840 LY6HO94772 140 aa13.03□□□□□ -0.32
SMAD6-201ENST00000288840 REC114Q7Z4M0 266 aa13.03□□□□□ -0.32
SMAD6-201ENST00000288840 EAF1Q96JC9 268 aaPredicted RBP13.03□□□□□ -0.32
SMAD6-201ENST00000288840 SSBP4Q9BWG4 385 aaPredicted RBP13.03□□□□□ -0.32
SMAD6-201ENST00000288840 TNFRSF19Q9NS68 423 aa13.03□□□□□ -0.32
SMAD6-201ENST00000288840 SRRM4A7MD48 611 aaKnown RBP13.03□□□□□ -0.32
SMAD6-201ENST00000288840 FAM87AP0C7U9 286 aa13.03□□□□□ -0.32
SMAD6-201ENST00000288840 LYPD2Q6UXB3 125 aa13.03□□□□□ -0.32
SMAD6-201ENST00000288840 S100A7AQ86SG5 101 aa13.03□□□□□ -0.32
SMAD6-201ENST00000288840 UPK2O00526 184 aa13.02□□□□□ -0.32
SMAD6-201ENST00000288840 CHEK1O14757 476 aa13.02□□□□□ -0.32
SMAD6-201ENST00000288840 ZNF25P17030 456 aaPredicted RBP13.02□□□□□ -0.33
SMAD6-201ENST00000288840 Q56UQ5 140 aa13.02□□□□□ -0.33
SMAD6-201ENST00000288840 ASCL2Q99929 193 aa13.02□□□□□ -0.33
SMAD6-201ENST00000288840 SERTM2A0A1B0GWG4 89 aa13.02□□□□□ -0.33
SMAD6-201ENST00000288840 DIRC3C9JPN6 131 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms