RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 GAMTQ14353 236 aa16.76■□□□□ 0.27
YBX3-202ENST00000279550 FAM90A2PQ658T7 463 aa16.76■□□□□ 0.27
YBX3-202ENST00000279550 DPM3Q9P2X0 92 aa16.76■□□□□ 0.27
YBX3-202ENST00000279550 VAX2Q9UIW0 290 aa16.76■□□□□ 0.27
YBX3-202ENST00000279550 MED13LQ71F56 2210 aa16.76■□□□□ 0.27
YBX3-202ENST00000279550 IGKV1OR2-108A0A075B7D4 117 aa16.76■□□□□ 0.27
YBX3-202ENST00000279550 H3BQ15 152 aa16.76■□□□□ 0.27
YBX3-202ENST00000279550 IFNA1P01562 189 aa16.76■□□□□ 0.27
YBX3-202ENST00000279550 REG1AP05451 166 aa16.76■□□□□ 0.27
YBX3-202ENST00000279550 LINC00869P0C866 280 aa16.76■□□□□ 0.27
YBX3-202ENST00000279550 CD69Q07108 199 aa16.76■□□□□ 0.27
YBX3-202ENST00000279550 STPG3Q8N7X2 389 aa16.76■□□□□ 0.27
YBX3-202ENST00000279550 P2RX4Q99571 388 aa16.76■□□□□ 0.27
YBX3-202ENST00000279550 RPS10P5Q9NQ39 176 aa16.76■□□□□ 0.27
YBX3-202ENST00000279550 METTL1Q9UBP6 276 aaKnown RBP16.76■□□□□ 0.27
YBX3-202ENST00000279550 HILPDAQ9Y5L2 63 aa16.76■□□□□ 0.27
YBX3-202ENST00000279550 IGLC7A0M8Q6 106 aa16.75■□□□□ 0.27
YBX3-202ENST00000279550 SOX15O60248 233 aa16.75■□□□□ 0.27
YBX3-202ENST00000279550 TOX4O94842 621 aa16.75■□□□□ 0.27
YBX3-202ENST00000279550 MSMBP08118 114 aa16.75■□□□□ 0.27
YBX3-202ENST00000279550 B2MP61769 119 aa16.75■□□□□ 0.27
YBX3-202ENST00000279550 LOXL1Q08397 574 aaPredicted RBP16.75■□□□□ 0.27
YBX3-202ENST00000279550 TNXAQ16473 311 aa16.75■□□□□ 0.27
YBX3-202ENST00000279550 TMEM144Q7Z5S9 345 aa16.75■□□□□ 0.27
YBX3-202ENST00000279550 MMD2Q8IY49 270 aa16.75■□□□□ 0.27
YBX3-202ENST00000279550 CFHR4Q92496 578 aa16.75■□□□□ 0.27
YBX3-202ENST00000279550 Q96MF0 132 aa16.75■□□□□ 0.27
YBX3-202ENST00000279550 FBXL15Q9H469 300 aa16.75■□□□□ 0.27
YBX3-202ENST00000279550 SLC45A2Q9UMX9 530 aa16.75■□□□□ 0.27
YBX3-202ENST00000279550 B4DSR2 109 aa16.74■□□□□ 0.27
YBX3-202ENST00000279550 RNF223E7ERA6 249 aa16.74■□□□□ 0.27
YBX3-202ENST00000279550 VENTXO95231 258 aa16.74■□□□□ 0.27
YBX3-202ENST00000279550 RPL29P47914 159 aaKnown RBP16.74■□□□□ 0.27
YBX3-202ENST00000279550 CD81P60033 236 aa16.74■□□□□ 0.27
YBX3-202ENST00000279550 PRR20EP86478 221 aa16.74■□□□□ 0.27
YBX3-202ENST00000279550 PRR20CP86479 221 aa16.74■□□□□ 0.27
YBX3-202ENST00000279550 PRR20DP86480 221 aa16.74■□□□□ 0.27
YBX3-202ENST00000279550 PRR20BP86481 221 aa16.74■□□□□ 0.27
YBX3-202ENST00000279550 PRR20AP86496 221 aa16.74■□□□□ 0.27
YBX3-202ENST00000279550 FBLN7Q53RD9 439 aa16.74■□□□□ 0.27
YBX3-202ENST00000279550 SLC16A13Q7RTY0 426 aa16.74■□□□□ 0.27
YBX3-202ENST00000279550 IQCF2Q8IXL9 164 aa16.74■□□□□ 0.27
YBX3-202ENST00000279550 HOXB4P17483 251 aaPredicted RBP16.73■□□□□ 0.27
YBX3-202ENST00000279550 RPL27AP46776 148 aaKnown RBP16.73■□□□□ 0.27
YBX3-202ENST00000279550 SSBP2P81877 361 aaPredicted RBP16.73■□□□□ 0.27
YBX3-202ENST00000279550 SPATA31B1PQ5VZV4 182 aa16.73■□□□□ 0.27
YBX3-202ENST00000279550 C19orf35Q6ZS72 473 aa16.73■□□□□ 0.27
YBX3-202ENST00000279550 OR2T6Q8NHC8 308 aa16.73■□□□□ 0.27
YBX3-202ENST00000279550 FNDC4Q9H6D8 234 aaPredicted RBP16.73■□□□□ 0.27
YBX3-202ENST00000279550 KCNIP2Q9NS61 270 aa16.73■□□□□ 0.27
YBX3-202ENST00000279550 UNC79Q9P2D8 2635 aa16.73■□□□□ 0.27
YBX3-202ENST00000279550 LOC105371267A0A1B0GV96 52 aa16.73■□□□□ 0.27
YBX3-202ENST00000279550 FCN1O00602 326 aa16.73■□□□□ 0.27
YBX3-202ENST00000279550 AREGP15514 252 aa16.73■□□□□ 0.27
YBX3-202ENST00000279550 ATF4P18848 351 aaPredicted RBP16.73■□□□□ 0.27
YBX3-202ENST00000279550 OR10J1P30954 320 aa16.73■□□□□ 0.27
YBX3-202ENST00000279550 PAX8Q06710 450 aa16.73■□□□□ 0.27
YBX3-202ENST00000279550 RBMS3Q6XE24 437 aaKnown RBP16.73■□□□□ 0.27
YBX3-202ENST00000279550 ABCA2Q9BZC7 2435 aa16.73■□□□□ 0.27
YBX3-202ENST00000279550 NAV3Q8IVL0 2385 aa16.72■□□□□ 0.27
YBX3-202ENST00000279550 A0A1W2PPV4 95 aa16.72■□□□□ 0.27
YBX3-202ENST00000279550 PLXNB1O43157 2135 aa16.72■□□□□ 0.27
YBX3-202ENST00000279550 COMPP49747 757 aaPredicted RBP16.72■□□□□ 0.27
YBX3-202ENST00000279550 GNB1P62873 340 aa16.72■□□□□ 0.27
YBX3-202ENST00000279550 RAB31Q13636 194 aa16.72■□□□□ 0.27
YBX3-202ENST00000279550 SLC35E3Q7Z769 313 aa16.72■□□□□ 0.27
YBX3-202ENST00000279550 DYNAPQ8N1N2 210 aa16.72■□□□□ 0.27
YBX3-202ENST00000279550 TBX15Q96SF7 602 aa16.72■□□□□ 0.27
YBX3-202ENST00000279550 APELAP0DMC3 54 aa16.71■□□□□ 0.27
YBX3-202ENST00000279550 CD24P25063 80 aa16.71■□□□□ 0.27
YBX3-202ENST00000279550 GPX4P36969 197 aaPredicted RBP16.71■□□□□ 0.27
YBX3-202ENST00000279550 MFAP2P55001 183 aa16.71■□□□□ 0.27
YBX3-202ENST00000279550 PPP1R27Q86WC6 154 aa16.71■□□□□ 0.27
YBX3-202ENST00000279550 MAPK1IP1LQ8NDC0 245 aa16.71■□□□□ 0.27
YBX3-202ENST00000279550 ABHD5Q8WTS1 349 aa16.71■□□□□ 0.27
YBX3-202ENST00000279550 C17orf50Q8WW18 174 aa16.71■□□□□ 0.27
YBX3-202ENST00000279550 MANBALQ9NQG1 85 aa16.71■□□□□ 0.27
YBX3-202ENST00000279550 SMCO4Q9NRQ5 59 aa16.71■□□□□ 0.27
YBX3-202ENST00000279550 TEX22C9J3V5 150 aa16.7■□□□□ 0.26
YBX3-202ENST00000279550 PAGE4O60829 102 aa16.7■□□□□ 0.26
YBX3-202ENST00000279550 GATA2P23769 480 aaPredicted RBP16.7■□□□□ 0.26
YBX3-202ENST00000279550 MAS1LP35410 378 aa16.7■□□□□ 0.26
YBX3-202ENST00000279550 CEACAM3P40198 252 aa16.7■□□□□ 0.26
YBX3-202ENST00000279550 PSMB3P49720 205 aa16.7■□□□□ 0.26
YBX3-202ENST00000279550 MEF2BQ02080 365 aaPredicted RBP16.7■□□□□ 0.26
YBX3-202ENST00000279550 HABP2Q14520 560 aaPredicted RBP16.7■□□□□ 0.26
YBX3-202ENST00000279550 RHEBQ15382 184 aa16.7■□□□□ 0.26
YBX3-202ENST00000279550 TMEM249Q2WGJ8 235 aa16.7■□□□□ 0.26
YBX3-202ENST00000279550 LINC01356Q8N9X3 169 aa16.7■□□□□ 0.26
YBX3-202ENST00000279550 RNASEH2CQ8TDP1 164 aaKnown RBP16.7■□□□□ 0.26
YBX3-202ENST00000279550 ACY3Q96HD9 319 aa16.7■□□□□ 0.26
YBX3-202ENST00000279550 RNF5Q99942 180 aa16.7■□□□□ 0.26
YBX3-202ENST00000279550 MRPL36Q9P0J6 103 aaKnown RBP16.7■□□□□ 0.26
YBX3-202ENST00000279550 MAP1AP78559 2803 aaPredicted RBP16.7■□□□□ 0.26
YBX3-202ENST00000279550 SVEP1Q4LDE5 3571 aa16.7■□□□□ 0.26
YBX3-202ENST00000279550 IGHV3-48P01763 117 aa16.7■□□□□ 0.26
YBX3-202ENST00000279550 CACNG8Q8WXS5 425 aa16.7■□□□□ 0.26
YBX3-202ENST00000279550 SLC35E1Q96K37 410 aa16.7■□□□□ 0.26
YBX3-202ENST00000279550 HIF1ANQ9NWT6 349 aa16.7■□□□□ 0.26
YBX3-202ENST00000279550 PDZD2O15018 2839 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms