RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 CYB5BO43169 146 aa13.39□□□□□ -0.27
SKP2-201ENST00000274254 CCNKO75909 580 aa13.39□□□□□ -0.27
SKP2-201ENST00000274254 TRGV3P03979 118 aa13.39□□□□□ -0.27
SKP2-201ENST00000274254 RIPPLY3P57055 190 aa13.39□□□□□ -0.27
SKP2-201ENST00000274254 RHOGP84095 191 aa13.39□□□□□ -0.27
SKP2-201ENST00000274254 KIAA0141Q14154 515 aaPredicted RBP13.39□□□□□ -0.27
SKP2-201ENST00000274254 SLC25A24Q6NUK1 477 aa13.39□□□□□ -0.27
SKP2-201ENST00000274254 TMEM65Q6PI78 240 aa13.39□□□□□ -0.27
SKP2-201ENST00000274254 TMEM14EPQ6UXP3 125 aa13.39□□□□□ -0.27
SKP2-201ENST00000274254 LCNL1Q6ZST4 164 aa13.39□□□□□ -0.27
SKP2-201ENST00000274254 NOXA1Q86UR1 476 aa13.39□□□□□ -0.27
SKP2-201ENST00000274254 NECAP1Q8NC96 275 aa13.39□□□□□ -0.27
SKP2-201ENST00000274254 LYRM2Q9NU23 88 aaPredicted RBP13.39□□□□□ -0.27
SKP2-201ENST00000274254 MBD2Q9UBB5 411 aa13.39□□□□□ -0.27
SKP2-201ENST00000274254 CORTO00230 105 aa13.39□□□□□ -0.27
SKP2-201ENST00000274254 OR2J3O76001 311 aa13.39□□□□□ -0.27
SKP2-201ENST00000274254 TPPP2P59282 170 aa13.39□□□□□ -0.27
SKP2-201ENST00000274254 KRTAP10-3P60369 221 aa13.39□□□□□ -0.27
SKP2-201ENST00000274254 RNASEH2CQ8TDP1 164 aaKnown RBP13.39□□□□□ -0.27
SKP2-201ENST00000274254 THYN1Q9P016 225 aa13.39□□□□□ -0.27
SKP2-201ENST00000274254 COL6A5A8TX70 2615 aa13.38□□□□□ -0.27
SKP2-201ENST00000274254 FAM223BA6NKX1 122 aa13.38□□□□□ -0.27
SKP2-201ENST00000274254 NDUFB8O95169 186 aa13.38□□□□□ -0.27
SKP2-201ENST00000274254 RPLP1P05386 114 aaKnown RBP13.38□□□□□ -0.27
SKP2-201ENST00000274254 P2RY1P47900 373 aa13.38□□□□□ -0.27
SKP2-201ENST00000274254 CAV2P51636 162 aa13.38□□□□□ -0.27
SKP2-201ENST00000274254 AKAP14Q86UN6 197 aa13.38□□□□□ -0.27
SKP2-201ENST00000274254 FAM223AQ8IWN6 122 aa13.38□□□□□ -0.27
SKP2-201ENST00000274254 TCTE3Q8IZS6 198 aa13.38□□□□□ -0.27
SKP2-201ENST00000274254 THAP6Q8TBB0 222 aa13.38□□□□□ -0.27
SKP2-201ENST00000274254 MISP3Q96FF7 219 aa13.38□□□□□ -0.27
SKP2-201ENST00000274254 FBXL7Q9UJT9 491 aa13.38□□□□□ -0.27
SKP2-201ENST00000274254 PMS2P5A8MQ11 134 aa13.37□□□□□ -0.27
SKP2-201ENST00000274254 SMLR1H3BR10 107 aa13.37□□□□□ -0.27
SKP2-201ENST00000274254 I3L2K1 104 aa13.37□□□□□ -0.27
SKP2-201ENST00000274254 K7EIM0 57 aa13.37□□□□□ -0.27
SKP2-201ENST00000274254 OR8U8P0C7N1 319 aa13.37□□□□□ -0.27
SKP2-201ENST00000274254 CD28P10747 220 aa13.37□□□□□ -0.27
SKP2-201ENST00000274254 RAB11AP62491 216 aa13.37□□□□□ -0.27
SKP2-201ENST00000274254 DEFA5Q01523 94 aa13.37□□□□□ -0.27
SKP2-201ENST00000274254 EXOSC2Q13868 293 aaKnown RBP13.37□□□□□ -0.27
SKP2-201ENST00000274254 C15orf32Q32M92 178 aa13.37□□□□□ -0.27
SKP2-201ENST00000274254 TMEM252Q8N6L7 170 aa13.37□□□□□ -0.27
SKP2-201ENST00000274254 USMG5Q96IX5 58 aa13.37□□□□□ -0.27
SKP2-201ENST00000274254 FAM24AA6NFZ4 105 aa13.36□□□□□ -0.27
SKP2-201ENST00000274254 PRSS46E5RG02 174 aa13.36□□□□□ -0.27
SKP2-201ENST00000274254 IFNA4P05014 189 aa13.36□□□□□ -0.27
SKP2-201ENST00000274254 METTL15P1P0C7V9 234 aa13.36□□□□□ -0.27
SKP2-201ENST00000274254 SLC25A4P12235 298 aa13.36□□□□□ -0.27
SKP2-201ENST00000274254 ETV3LQ6ZN32 361 aa13.36□□□□□ -0.27
SKP2-201ENST00000274254 ZNF491Q8N8L2 437 aa13.36□□□□□ -0.27
SKP2-201ENST00000274254 NEURL2Q9BR09 285 aa13.36□□□□□ -0.27
SKP2-201ENST00000274254 FNDC4Q9H6D8 234 aaPredicted RBP13.36□□□□□ -0.27
SKP2-201ENST00000274254 PAIP2BQ9ULR5 123 aaKnown RBP13.36□□□□□ -0.27
SKP2-201ENST00000274254 A0A0G2JLM5 398 aa13.35□□□□□ -0.27
SKP2-201ENST00000274254 IGSF23A1L1A6 192 aa13.35□□□□□ -0.27
SKP2-201ENST00000274254 MT-CO2P00403 227 aa13.35□□□□□ -0.27
SKP2-201ENST00000274254 C11orf44Q8N8P7 122 aa13.35□□□□□ -0.27
SKP2-201ENST00000274254 VN1R17PQ8TDU5 208 aa13.35□□□□□ -0.27
SKP2-201ENST00000274254 DCUN1D4Q92564 292 aa13.35□□□□□ -0.27
SKP2-201ENST00000274254 PINX1Q96BK5 328 aaKnown RBP13.35□□□□□ -0.27
SKP2-201ENST00000274254 UBE2E2Q96LR5 201 aa13.35□□□□□ -0.27
SKP2-201ENST00000274254 TENM1Q9UKZ4 2725 aa13.35□□□□□ -0.27
SKP2-201ENST00000274254 MFSD2BA6NFX1 497 aa13.34□□□□□ -0.27
SKP2-201ENST00000274254 OPRK1P41145 380 aa13.34□□□□□ -0.27
SKP2-201ENST00000274254 CDX1P47902 265 aaPredicted RBP13.34□□□□□ -0.27
SKP2-201ENST00000274254 ATP5G2Q06055 141 aa13.34□□□□□ -0.27
SKP2-201ENST00000274254 HAPLN4Q86UW8 402 aa13.34□□□□□ -0.27
SKP2-201ENST00000274254 SCARB1Q8WTV0 552 aa13.34□□□□□ -0.27
SKP2-201ENST00000274254 CXorf58Q96LI9 332 aa13.34□□□□□ -0.27
SKP2-201ENST00000274254 CITED2Q99967 270 aaPredicted RBP13.34□□□□□ -0.27
SKP2-201ENST00000274254 TCRBV4S1A1TA0A5B7 111 aa13.34□□□□□ -0.27
SKP2-201ENST00000274254 SULT1A1P50225 295 aa13.34□□□□□ -0.27
SKP2-201ENST00000274254 CD69Q07108 199 aa13.34□□□□□ -0.27
SKP2-201ENST00000274254 CD300CQ08708 224 aa13.34□□□□□ -0.27
SKP2-201ENST00000274254 ARL16Q0P5N6 197 aa13.34□□□□□ -0.27
SKP2-201ENST00000274254 MLANAQ16655 118 aa13.34□□□□□ -0.27
SKP2-201ENST00000274254 CACNG8Q8WXS5 425 aa13.34□□□□□ -0.27
SKP2-201ENST00000274254 CITED1Q99966 193 aa13.34□□□□□ -0.27
SKP2-201ENST00000274254 SLC25A31Q9H0C2 315 aa13.34□□□□□ -0.27
SKP2-201ENST00000274254 IGHV3-21A0A0B4J1V1 117 aa13.33□□□□□ -0.28
SKP2-201ENST00000274254 RPS10-NUDT3A0A1W2PQS6 291 aa13.33□□□□□ -0.28
SKP2-201ENST00000274254 CST7O76096 145 aa13.33□□□□□ -0.28
SKP2-201ENST00000274254 SCAF4O95104 1147 aaKnown RBP13.33□□□□□ -0.28
SKP2-201ENST00000274254 GPX4P36969 197 aaPredicted RBP13.33□□□□□ -0.28
SKP2-201ENST00000274254 EWSR1Q01844 656 aaKnown RBP eCLIP13.33□□□□□ -0.28
SKP2-201ENST00000274254 HIST2H2BDQ6DRA6 164 aa13.33□□□□□ -0.28
SKP2-201ENST00000274254 OR8G2PQ6IF36 304 aa13.33□□□□□ -0.28
SKP2-201ENST00000274254 ZNF343Q6P1L6 599 aa13.33□□□□□ -0.28
SKP2-201ENST00000274254 STX12Q86Y82 276 aa13.33□□□□□ -0.28
SKP2-201ENST00000274254 OR11H4Q8NGC9 324 aa13.33□□□□□ -0.28
SKP2-201ENST00000274254 OR10P1Q8NGE3 313 aa13.33□□□□□ -0.28
SKP2-201ENST00000274254 ZNF502Q8TBZ5 544 aa13.33□□□□□ -0.28
SKP2-201ENST00000274254 GNB4Q9HAV0 340 aa13.33□□□□□ -0.28
SKP2-201ENST00000274254 TSSC4Q9Y5U2 329 aaPredicted RBP13.33□□□□□ -0.28
SKP2-201ENST00000274254 S4R3C0 116 aa13.33□□□□□ -0.28
SKP2-201ENST00000274254 FXYD6-FXYD2A0A087WZ82 144 aa13.32□□□□□ -0.28
SKP2-201ENST00000274254 TRBV7-1A0A0A6YYK4 115 aa13.32□□□□□ -0.28
SKP2-201ENST00000274254 F8W735 103 aaPredicted RBP13.32□□□□□ -0.28
SKP2-201ENST00000274254 IGHV3-48P01763 117 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms