RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 TBX15Q96SF7 602 aa16.52■□□□□ 0.24
LYSMD2-201ENST00000267838 RNF5Q99942 180 aa16.52■□□□□ 0.24
LYSMD2-201ENST00000267838 SLC39A9Q9NUM3 307 aa16.52■□□□□ 0.24
LYSMD2-201ENST00000267838 DOK5Q9P104 306 aa16.52■□□□□ 0.24
LYSMD2-201ENST00000267838 URGCP-MRPS24S4R325 110 aa16.52■□□□□ 0.24
LYSMD2-201ENST00000267838 IGHV4-30-2A0A087WSY4 118 aa16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 CRYGBP07316 175 aa16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 CD1BP29016 333 aa16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 FGF8P55075 233 aaPredicted RBP16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 MRGPRG-AS1Q2M3A8 158 aa16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 CFHR4Q92496 578 aa16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 FAM210BQ96KR6 192 aa16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 GGACTQ9BVM4 153 aa16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 LPAR2Q9HBW0 351 aa16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 TNCP24821 2201 aa16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 LINC00587B1AMM8 73 aa16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 VENTXO95231 258 aa16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 FGF7P21781 194 aa16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 ELLP55199 621 aaPredicted RBP16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 MINOS1Q5TGZ0 78 aa16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 SSX7Q7RTT5 188 aa16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 OR10W1Q8NGF6 305 aa16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 GAR1Q9NY12 217 aaKnown RBP16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 NAT8Q9UHE5 227 aa16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 MINOS1-NBL1R4GNA1 71 aa16.51■□□□□ 0.23
LYSMD2-201ENST00000267838 CTXND1A0A1B0GTU2 59 aa16.5■□□□□ 0.23
LYSMD2-201ENST00000267838 E7EUB6 86 aa16.5■□□□□ 0.23
LYSMD2-201ENST00000267838 MDKP21741 143 aaPredicted RBP16.5■□□□□ 0.23
LYSMD2-201ENST00000267838 LGALS4P56470 323 aa16.5■□□□□ 0.23
LYSMD2-201ENST00000267838 MMD2Q8IY49 270 aa16.5■□□□□ 0.23
LYSMD2-201ENST00000267838 MANBALQ9NQG1 85 aa16.5■□□□□ 0.23
LYSMD2-201ENST00000267838 TRBV24-1A0A075B6N3 115 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 A0A1W2PN81 502 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 CGB1A6NKQ9 187 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 OOSP1A8MZH6 123 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 INS-IGF2F8WCM5 200 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 HIST1H2BKO60814 126 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 HIST1H2BJP06899 126 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 HIST1H2BOP23527 126 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 COL8A1P27658 744 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 HIST1H2BBP33778 126 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 CHRNA7P36544 502 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 PSMB3P49720 205 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 ATP5IP56385 69 aaPredicted RBP16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 HIST1H2BDP58876 126 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 DSCR9P59020 149 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 HIST1H2BCP62807 126 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 PRSS8Q16651 343 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 HIST2H2BEQ16778 126 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 C10orf55Q5SWW7 151 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 HIST1H2BHQ93079 126 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 HIST1H2BNQ99877 126 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 HIST1H2BMQ99879 126 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 SIGLEC9Q9Y336 463 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 TMEM250H0YL14 139 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 YIF1AO95070 293 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 UBE2E1P51965 193 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 MEF2BQ02080 365 aaPredicted RBP16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 SSX2Q16385 188 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 BSXQ3C1V8 233 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 CCDC144NLQ6NUI1 221 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 CYP2G1PQ6ZSU1 146 aa16.49■□□□□ 0.23
LYSMD2-201ENST00000267838 PPP1R2P9O14990 202 aa16.48■□□□□ 0.23
LYSMD2-201ENST00000267838 ERHP84090 104 aaKnown RBP16.48■□□□□ 0.23
LYSMD2-201ENST00000267838 HNF4GQ14541 408 aa16.48■□□□□ 0.23
LYSMD2-201ENST00000267838 C2orf83Q53S99 150 aa16.48■□□□□ 0.23
LYSMD2-201ENST00000267838 NPCDR1Q9BY65 106 aa16.48■□□□□ 0.23
LYSMD2-201ENST00000267838 WDR83OSQ9Y284 106 aa16.48■□□□□ 0.23
LYSMD2-201ENST00000267838 TBL2Q9Y4P3 447 aaKnown RBP16.48■□□□□ 0.23
LYSMD2-201ENST00000267838 SMCO3A2RU48 225 aa16.47■□□□□ 0.23
LYSMD2-201ENST00000267838 J3QKU1 62 aa16.47■□□□□ 0.23
LYSMD2-201ENST00000267838 IGKV1D-33P01593 117 aa16.47■□□□□ 0.23
LYSMD2-201ENST00000267838 IGKV1-33P01594 117 aa16.47■□□□□ 0.23
LYSMD2-201ENST00000267838 TRGC2P03986 189 aa16.47■□□□□ 0.23
LYSMD2-201ENST00000267838 RNASE2P10153 161 aaKnown RBP16.47■□□□□ 0.23
LYSMD2-201ENST00000267838 DYNAPQ8N1N2 210 aa16.47■□□□□ 0.23
LYSMD2-201ENST00000267838 SMIM7Q9BQ49 75 aa16.47■□□□□ 0.23
LYSMD2-201ENST00000267838 ACTR3CQ9C0K3 210 aaPredicted RBP16.47■□□□□ 0.23
LYSMD2-201ENST00000267838 DMRT1Q9Y5R6 373 aa16.47■□□□□ 0.23
LYSMD2-201ENST00000267838 TENM4Q6N022 2769 aa16.47■□□□□ 0.23
LYSMD2-201ENST00000267838 C17orf112F2Z3M2 114 aa16.46■□□□□ 0.23
LYSMD2-201ENST00000267838 SOX15O60248 233 aa16.46■□□□□ 0.23
LYSMD2-201ENST00000267838 PAX8Q06710 450 aa16.46■□□□□ 0.23
LYSMD2-201ENST00000267838 TNXAQ16473 311 aa16.46■□□□□ 0.23
LYSMD2-201ENST00000267838 DNLZQ5SXM8 178 aa16.46■□□□□ 0.23
LYSMD2-201ENST00000267838 PPP1R27Q86WC6 154 aa16.46■□□□□ 0.23
LYSMD2-201ENST00000267838 RPP25LQ8N5L8 163 aaKnown RBP16.46■□□□□ 0.23
LYSMD2-201ENST00000267838 FBXL15Q9H469 300 aa16.46■□□□□ 0.23
LYSMD2-201ENST00000267838 ACTL6BO94805 426 aa16.46■□□□□ 0.22
LYSMD2-201ENST00000267838 MOSP00540 346 aa16.46■□□□□ 0.22
LYSMD2-201ENST00000267838 WT1-ASQ06250 92 aa16.46■□□□□ 0.22
LYSMD2-201ENST00000267838 TMEM241Q24JQ0 296 aa16.46■□□□□ 0.22
LYSMD2-201ENST00000267838 ACSM6Q6P461 480 aa16.46■□□□□ 0.22
LYSMD2-201ENST00000267838 TREML4Q6UXN2 200 aa16.46■□□□□ 0.22
LYSMD2-201ENST00000267838 ZNF709Q8N972 641 aa16.46■□□□□ 0.22
LYSMD2-201ENST00000267838 CD81P60033 236 aa16.45■□□□□ 0.22
LYSMD2-201ENST00000267838 ARSJQ5FYB0 599 aaPredicted RBP16.45■□□□□ 0.22
LYSMD2-201ENST00000267838 OR10G9Q8NGN4 311 aa16.45■□□□□ 0.22
LYSMD2-201ENST00000267838 OR10G7Q8NGN6 311 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms