RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 ATP5G3P48201 142 aa13.59□□□□□ -0.23
CHKA-201ENST00000265689 ATP5IP56385 69 aaPredicted RBP13.59□□□□□ -0.23
CHKA-201ENST00000265689 TMEM249Q2WGJ8 235 aa13.59□□□□□ -0.23
CHKA-201ENST00000265689 SPNS3Q6ZMD2 512 aa13.59□□□□□ -0.23
CHKA-201ENST00000265689 Q8WTZ3 238 aa13.59□□□□□ -0.23
CHKA-201ENST00000265689 TIMD4Q96H15 378 aa13.59□□□□□ -0.23
CHKA-201ENST00000265689 NAT8Q9UHE5 227 aa13.59□□□□□ -0.23
CHKA-201ENST00000265689 SLC45A2Q9UMX9 530 aa13.59□□□□□ -0.23
CHKA-201ENST00000265689 IGHV1-3A0A0C4DH29 117 aa13.59□□□□□ -0.23
CHKA-201ENST00000265689 S100A9P06702 114 aaKnown RBP13.59□□□□□ -0.23
CHKA-201ENST00000265689 SMIM6P0DI80 62 aa13.59□□□□□ -0.23
CHKA-201ENST00000265689 NPPCP23582 126 aa13.59□□□□□ -0.23
CHKA-201ENST00000265689 GATA2P23769 480 aaPredicted RBP13.59□□□□□ -0.23
CHKA-201ENST00000265689 CD69Q07108 199 aa13.59□□□□□ -0.23
CHKA-201ENST00000265689 KIAA0141Q14154 515 aaPredicted RBP13.59□□□□□ -0.23
CHKA-201ENST00000265689 ELOBQ15370 118 aa13.59□□□□□ -0.23
CHKA-201ENST00000265689 TMEM241Q24JQ0 296 aa13.59□□□□□ -0.23
CHKA-201ENST00000265689 CST9LP1Q5W188 147 aa13.59□□□□□ -0.23
CHKA-201ENST00000265689 PNKDQ8N490 385 aa13.59□□□□□ -0.23
CHKA-201ENST00000265689 OR4P4Q8NGL7 312 aa13.59□□□□□ -0.23
CHKA-201ENST00000265689 SIRT7Q9NRC8 400 aa13.59□□□□□ -0.23
CHKA-201ENST00000265689 INSIG2Q9Y5U4 225 aa13.59□□□□□ -0.23
CHKA-201ENST00000265689 A0A1W2PN81 502 aa13.58□□□□□ -0.23
CHKA-201ENST00000265689 IGHV2-5P01817 119 aa13.58□□□□□ -0.23
CHKA-201ENST00000265689 FABP1P07148 127 aa13.58□□□□□ -0.23
CHKA-201ENST00000265689 CHRNA7P36544 502 aa13.58□□□□□ -0.23
CHKA-201ENST00000265689 LGALS7P47929 136 aa13.58□□□□□ -0.23
CHKA-201ENST00000265689 CYP2G1PQ6ZSU1 146 aa13.58□□□□□ -0.23
CHKA-201ENST00000265689 LY6G5BQ8NDX9 201 aa13.58□□□□□ -0.23
CHKA-201ENST00000265689 OR51G1Q8NGK1 321 aa13.58□□□□□ -0.23
CHKA-201ENST00000265689 GSN-AS1Q9NRJ2 163 aa13.58□□□□□ -0.23
CHKA-201ENST00000265689 USP9YO00507 2555 aaPredicted RBP13.58□□□□□ -0.24
CHKA-201ENST00000265689 PLXNB1O43157 2135 aa13.58□□□□□ -0.24
CHKA-201ENST00000265689 FOXH1O75593 365 aa13.58□□□□□ -0.24
CHKA-201ENST00000265689 CXorf1O96002 111 aa13.58□□□□□ -0.24
CHKA-201ENST00000265689 RBP4P02753 201 aa13.58□□□□□ -0.24
CHKA-201ENST00000265689 S100A8P05109 93 aa13.58□□□□□ -0.24
CHKA-201ENST00000265689 LIPFP07098 398 aa13.58□□□□□ -0.24
CHKA-201ENST00000265689 CXCL1P09341 107 aa13.58□□□□□ -0.24
CHKA-201ENST00000265689 OR10J1P30954 320 aa13.58□□□□□ -0.24
CHKA-201ENST00000265689 ADIRFQ15847 76 aa13.58□□□□□ -0.24
CHKA-201ENST00000265689 BEND2Q8NDZ0 799 aa13.58□□□□□ -0.24
CHKA-201ENST00000265689 OR2T6Q8NHC8 308 aa13.58□□□□□ -0.24
CHKA-201ENST00000265689 NEU4Q8WWR8 484 aaPredicted RBP13.58□□□□□ -0.24
CHKA-201ENST00000265689 METTL1Q9UBP6 276 aaKnown RBP13.58□□□□□ -0.24
CHKA-201ENST00000265689 ZANQ9Y493 2812 aa13.57□□□□□ -0.24
CHKA-201ENST00000265689 INS-IGF2F8WCM5 200 aa13.57□□□□□ -0.24
CHKA-201ENST00000265689 ACTL6BO94805 426 aa13.57□□□□□ -0.24
CHKA-201ENST00000265689 REG1AP05451 166 aa13.57□□□□□ -0.24
CHKA-201ENST00000265689 ARF6P62330 175 aa13.57□□□□□ -0.24
CHKA-201ENST00000265689 ZNF843Q8N446 348 aa13.57□□□□□ -0.24
CHKA-201ENST00000265689 SSX3Q99909 188 aa13.57□□□□□ -0.24
CHKA-201ENST00000265689 TGIF2-C20orf24A0A0A6YYL0 155 aa13.57□□□□□ -0.24
CHKA-201ENST00000265689 CLN5O75503 358 aa13.57□□□□□ -0.24
CHKA-201ENST00000265689 CDKN1AP38936 164 aa13.57□□□□□ -0.24
CHKA-201ENST00000265689 RHOBP62745 196 aa13.57□□□□□ -0.24
CHKA-201ENST00000265689 DTX2Q86UW9 622 aa13.57□□□□□ -0.24
CHKA-201ENST00000265689 ACY3Q96HD9 319 aa13.57□□□□□ -0.24
CHKA-201ENST00000265689 A0A1W2PPI3 338 aa13.56□□□□□ -0.24
CHKA-201ENST00000265689 CXorf65A6NEN9 183 aa13.56□□□□□ -0.24
CHKA-201ENST00000265689 IGHV3-48P01763 117 aa13.56□□□□□ -0.24
CHKA-201ENST00000265689 LDLRAD2Q5SZI1 272 aa13.56□□□□□ -0.24
CHKA-201ENST00000265689 RPEQ96AT9 228 aa13.56□□□□□ -0.24
CHKA-201ENST00000265689 MALSU1Q96EH3 234 aa13.56□□□□□ -0.24
CHKA-201ENST00000265689 GCHFRP30047 84 aa13.56□□□□□ -0.24
CHKA-201ENST00000265689 RPL23P62829 140 aaKnown RBP13.56□□□□□ -0.24
CHKA-201ENST00000265689 GNB1P62873 340 aa13.56□□□□□ -0.24
CHKA-201ENST00000265689 FAM78BQ5VT40 261 aa13.56□□□□□ -0.24
CHKA-201ENST00000265689 MIR17HGQ75NE6 70 aa13.56□□□□□ -0.24
CHKA-201ENST00000265689 TEX45Q8NA69 505 aa13.56□□□□□ -0.24
CHKA-201ENST00000265689 FNDC4Q9H6D8 234 aaPredicted RBP13.56□□□□□ -0.24
CHKA-201ENST00000265689 ZNF469Q96JG9 3925 aaPredicted RBP13.55□□□□□ -0.24
CHKA-201ENST00000265689 RPS10P46783 165 aaKnown RBP13.55□□□□□ -0.24
CHKA-201ENST00000265689 SSBP2P81877 361 aaPredicted RBP13.55□□□□□ -0.24
CHKA-201ENST00000265689 PSG5Q15238 335 aa13.55□□□□□ -0.24
CHKA-201ENST00000265689 CHODLQ9H9P2 273 aa13.55□□□□□ -0.24
CHKA-201ENST00000265689 NAV3Q8IVL0 2385 aa13.55□□□□□ -0.24
CHKA-201ENST00000265689 HELZ2Q9BYK8 2649 aaKnown RBP13.55□□□□□ -0.24
CHKA-201ENST00000265689 LY6LH3BQJ8 138 aa13.55□□□□□ -0.24
CHKA-201ENST00000265689 CRYGBP07316 175 aa13.55□□□□□ -0.24
CHKA-201ENST00000265689 APELAP0DMC3 54 aa13.55□□□□□ -0.24
CHKA-201ENST00000265689 TNXAQ16473 311 aa13.55□□□□□ -0.24
CHKA-201ENST00000265689 PRSS8Q16651 343 aa13.55□□□□□ -0.24
CHKA-201ENST00000265689 CACNG8Q8WXS5 425 aa13.55□□□□□ -0.24
CHKA-201ENST00000265689 UBTD1Q9HAC8 227 aa13.55□□□□□ -0.24
CHKA-201ENST00000265689 CLDN34H7C241 214 aa13.54□□□□□ -0.24
CHKA-201ENST00000265689 AP4M1O00189 453 aa13.54□□□□□ -0.24
CHKA-201ENST00000265689 GPX4P36969 197 aaPredicted RBP13.54□□□□□ -0.24
CHKA-201ENST00000265689 IGFBPL1Q8WX77 278 aa13.54□□□□□ -0.24
CHKA-201ENST00000265689 SLC35E1Q96K37 410 aa13.54□□□□□ -0.24
CHKA-201ENST00000265689 SSBP3Q9BWW4 388 aaPredicted RBP13.54□□□□□ -0.24
CHKA-201ENST00000265689 SIGLEC9Q9Y336 463 aa13.54□□□□□ -0.24
CHKA-201ENST00000265689 AMMECR1Q9Y4X0 333 aaPredicted RBP13.54□□□□□ -0.24
CHKA-201ENST00000265689 YTHDF2Q9Y5A9 579 aaKnown RBP13.54□□□□□ -0.24
CHKA-201ENST00000265689 LOC105371242A0A075B767 164 aa13.54□□□□□ -0.24
CHKA-201ENST00000265689 PDE6DO43924 150 aa13.54□□□□□ -0.24
CHKA-201ENST00000265689 NDUFS6O75380 124 aaKnown RBP13.54□□□□□ -0.24
CHKA-201ENST00000265689 NDUFB4O95168 129 aa13.54□□□□□ -0.24
CHKA-201ENST00000265689 DERL1Q9BUN8 251 aa13.54□□□□□ -0.24
CHKA-201ENST00000265689 TMEM242Q9NWH2 141 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms