RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 K7EP34 96 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 RHBDL1O75783 438 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 IGLV2-8P01709 118 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 HTR1DP28221 377 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 SEC11AP67812 179 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 PIP4P1Q86T03 277 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 URB1-AS1Q96HZ7 61 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 SSBP3Q9BWW4 388 aaPredicted RBP10.8□□□□□ -0.68
NUP54-201ENST00000264883 A0A1B0GV72 72 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 FAM90A9PA6NNJ1 464 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 ZNHIT1O43257 154 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 HBZP02008 142 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 BRWD1-AS2P59051 145 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 C9orf135Q5VTT2 229 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 LINC00173Q6ZV60 143 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 FAM216AQ8WUB2 273 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 FAM168AQ92567 244 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 C5orf30Q96GV9 206 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 MS4A6AQ9H2W1 248 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 SMPXQ9UHP9 88 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 NCKAP5O14513 1909 aa10.8□□□□□ -0.68
NUP54-201ENST00000264883 KNTC1P50748 2209 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 ZNF503-AS2A6NEH8 195 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 OOEPA6NGQ2 149 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 C9orf118A6NHY6 69 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 AHRRA9YTQ3 701 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 OR2J3O76001 311 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 MT-CO3P00414 261 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 APOA2P02652 100 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 FAM162BQ5T6X4 162 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 SLC35E4Q6ICL7 350 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 TRIB1Q96RU8 372 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 JMJD8Q96S16 334 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 SSBP4Q9BWG4 385 aaPredicted RBP10.79□□□□□ -0.68
NUP54-201ENST00000264883 ZNF292O60281 2723 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 LEPROTL1O95214 131 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 Q0VFX4 171 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 PSG5Q15238 335 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 TMEM97Q5BJF2 176 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 STPG3Q8N7X2 389 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 CT55Q8WUE5 264 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 WFDC12Q8WWY7 111 aa10.79□□□□□ -0.68
NUP54-201ENST00000264883 SDK2Q58EX2 2172 aa10.78□□□□□ -0.68
NUP54-201ENST00000264883 IGHV1-24A0A0C4DH33 117 aa10.78□□□□□ -0.68
NUP54-201ENST00000264883 C21orf140B9A014 251 aa10.78□□□□□ -0.68
NUP54-201ENST00000264883 WISP2O76076 250 aa10.78□□□□□ -0.68
NUP54-201ENST00000264883 AZU1P20160 251 aa10.78□□□□□ -0.68
NUP54-201ENST00000264883 UQCRFS1P47985 274 aa10.78□□□□□ -0.68
NUP54-201ENST00000264883 PPOXP50336 477 aa10.78□□□□□ -0.68
NUP54-201ENST00000264883 PLP1P60201 277 aa10.78□□□□□ -0.68
NUP54-201ENST00000264883 BPIFA4PQ86YQ2 179 aa10.78□□□□□ -0.68
NUP54-201ENST00000264883 HSD17B10Q99714 261 aaKnown RBP10.78□□□□□ -0.68
NUP54-201ENST00000264883 PINLYPA6NC86 204 aa10.77□□□□□ -0.68
NUP54-201ENST00000264883 H3BRM9 83 aa10.77□□□□□ -0.68
NUP54-201ENST00000264883 H3BUT2 72 aa10.77□□□□□ -0.68
NUP54-201ENST00000264883 PLGLB1Q02325 96 aa10.77□□□□□ -0.68
NUP54-201ENST00000264883 DHRS13Q6UX07 377 aa10.77□□□□□ -0.68
NUP54-201ENST00000264883 C6orf15Q6UXA7 325 aaPredicted RBP10.77□□□□□ -0.68
NUP54-201ENST00000264883 C2orf91Q6ZV80 131 aa10.77□□□□□ -0.68
NUP54-201ENST00000264883 MIR17HGQ75NE6 70 aa10.77□□□□□ -0.68
NUP54-201ENST00000264883 NUP35Q8NFH5 326 aa10.77□□□□□ -0.68
NUP54-201ENST00000264883 IGF2BP2-AS1Q96M15 143 aa10.77□□□□□ -0.68
NUP54-201ENST00000264883 OR2V2Q96R30 315 aa10.77□□□□□ -0.68
NUP54-201ENST00000264883 GCM1Q9NP62 436 aa10.77□□□□□ -0.68
NUP54-201ENST00000264883 HEYLQ9NQ87 328 aaPredicted RBP10.77□□□□□ -0.68
NUP54-201ENST00000264883 TMEM167BQ9NRX6 74 aa10.77□□□□□ -0.68
NUP54-201ENST00000264883 AHCTF1Q8WYP5 2266 aa10.77□□□□□ -0.69
NUP54-201ENST00000264883 ACTL6BO94805 426 aa10.77□□□□□ -0.69
NUP54-201ENST00000264883 SMIM17P0DL12 118 aa10.77□□□□□ -0.69
NUP54-201ENST00000264883 HIST1H1EP10412 219 aaKnown RBP10.77□□□□□ -0.69
NUP54-201ENST00000264883 CAMPP49913 170 aa10.77□□□□□ -0.69
NUP54-201ENST00000264883 TMPRSS3P57727 454 aa10.77□□□□□ -0.69
NUP54-201ENST00000264883 RAB31Q13636 194 aa10.77□□□□□ -0.69
NUP54-201ENST00000264883 TBC1D28Q2M2D7 210 aa10.77□□□□□ -0.69
NUP54-201ENST00000264883 ASPHD1Q5U4P2 390 aa10.77□□□□□ -0.69
NUP54-201ENST00000264883 TMEM251Q8N6I4 163 aa10.77□□□□□ -0.69
NUP54-201ENST00000264883 NHLRC2Q8NBF2 726 aa10.77□□□□□ -0.69
NUP54-201ENST00000264883 OR2K2Q8NGT1 345 aa10.77□□□□□ -0.69
NUP54-201ENST00000264883 OR52E5Q8NH55 327 aa10.77□□□□□ -0.69
NUP54-201ENST00000264883 PMCHL2Q9BQD1 86 aa10.77□□□□□ -0.69
NUP54-201ENST00000264883 LSM4Q9Y4Z0 139 aaKnown RBP10.77□□□□□ -0.69
NUP54-201ENST00000264883 PRSS46E5RG02 174 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 OR9G9P0C7N8 305 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 PSG3Q16557 428 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 OR10AG1Q8NH19 301 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 C1orf159Q96HA4 380 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 MAP1LC3CQ9BXW4 147 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 NPFFR1Q9GZQ6 430 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 ZNF355PQ9NSJ1 428 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 JKAMPQ9P055 326 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 CNTRLQ7Z7A1 2325 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 A6NDN8 102 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 COX8AP10176 69 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 FOXG1P55316 489 aaPredicted RBP10.76□□□□□ -0.69
NUP54-201ENST00000264883 SRYQ05066 204 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 FOXE3Q13461 319 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 OR1C1Q15619 314 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 HES3Q5TGS1 186 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 TRAT1Q6PIZ9 186 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 FAM214BQ7L5A3 538 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms