RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 DOPEY2Q9Y3R5 2298 aa13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 TAS2R60P59551 318 aa13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 MDS2Q8NDY4 140 aa13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 C5orf30Q96GV9 206 aa13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 TBL2Q9Y4P3 447 aaKnown RBP13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 LOC102724200A0A096LPH7 203 aaPredicted RBP13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 TRBV6-6A0A0A6YYG2 114 aa13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 TCF21O43680 179 aa13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 IGKV1-16P04430 117 aa13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 TNFRSF1AP19438 455 aa13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 ZNF134P52741 427 aa13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 PPIAL4AQ9Y536 164 aa13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 DMRTC2Q8IXT2 367 aaPredicted RBP13.35□□□□□ -0.27
PDZRN3-201ENST00000263666 PGPA6NDG6 321 aa13.35□□□□□ -0.27
PDZRN3-201ENST00000263666 SPATA45Q537H7 98 aa13.35□□□□□ -0.27
PDZRN3-201ENST00000263666 CT45A1Q5HYN5 189 aa13.35□□□□□ -0.27
PDZRN3-201ENST00000263666 PDPNQ86YL7 162 aa13.35□□□□□ -0.27
PDZRN3-201ENST00000263666 OR1L4Q8NGR5 311 aa13.35□□□□□ -0.27
PDZRN3-201ENST00000263666 CT45A3Q8NHU0 189 aa13.35□□□□□ -0.27
PDZRN3-201ENST00000263666 NUPR1O60356 82 aa13.35□□□□□ -0.27
PDZRN3-201ENST00000263666 LRRC10Q5BKY1 277 aa13.35□□□□□ -0.27
PDZRN3-201ENST00000263666 OR1L8Q8NGR8 309 aa13.35□□□□□ -0.27
PDZRN3-201ENST00000263666 MRPL20Q9BYC9 149 aaKnown RBP13.35□□□□□ -0.27
PDZRN3-201ENST00000263666 F2Z2F3 143 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 FRMD6-AS1P0C7T7 363 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 CT45A6P0DMU7 189 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 CT45A5P0DMU8 189 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 CT45A7P0DMV0 189 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 RPL8P62917 257 aaKnown RBP13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 VAMP3Q15836 100 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 AMMECR1Q9Y4X0 333 aaPredicted RBP13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 PTPRQQ9UMZ3 2332 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 KIR2DS2P43631 304 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 ERVK11-1P61568 191 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 UTF1Q5T230 341 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 ASCL2Q99929 193 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 MRPL37Q9BZE1 423 aaKnown RBP13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 IL36BQ9NZH7 164 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 IGHV3-35A0A0C4DH35 117 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 MUC21A0A0G2JKD1 596 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 MUC21A0A140T8X8 626 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 MUC21Q5SSG8 566 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 GBGT1Q8N5D6 347 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 EAF1Q96JC9 268 aaPredicted RBP13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 SELENOKQ9Y6D0 94 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 RPLP1P05386 114 aaKnown RBP13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 Q8NFD4 153 aa13.34□□□□□ -0.27
PDZRN3-201ENST00000263666 HCFC1P51610 2035 aa13.33□□□□□ -0.27
PDZRN3-201ENST00000263666 FOSL1P15407 271 aa13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 LCN2P80188 198 aa13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 VMA21Q3ZAQ7 101 aa13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 FAM90A1Q86YD7 464 aa13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 ADTRPQ96IZ2 230 aa13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 IDI2-AS1Q9NZ38 188 aa13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 STAG3L2P0CL84 134 aa13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 STAG3L3P0CL85 134 aa13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 SAA1P0DJI8 122 aaPredicted RBP13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 ARSJQ5FYB0 599 aaPredicted RBP13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 LCN12Q6JVE5 192 aa13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 WDR31Q8NA23 367 aa13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 GAL3ST2Q9H3Q3 398 aa13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 ELOVL5Q9NYP7 299 aa13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 NOTCH2Q04721 2471 aa13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 C8orf88P0DMB2 117 aa13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 CDKN1AP38936 164 aa13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 ASCL3Q9NQ33 180 aa13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 NCKAP5O14513 1909 aa13.33□□□□□ -0.28
PDZRN3-201ENST00000263666 SS18L1O75177 396 aaPredicted RBP13.32□□□□□ -0.28
PDZRN3-201ENST00000263666 CD3EP07766 207 aa13.32□□□□□ -0.28
PDZRN3-201ENST00000263666 RELBQ01201 579 aa13.32□□□□□ -0.28
PDZRN3-201ENST00000263666 KRTAP27-1Q3LI81 207 aa13.32□□□□□ -0.28
PDZRN3-201ENST00000263666 C11orf42Q8N5U0 333 aa13.32□□□□□ -0.28
PDZRN3-201ENST00000263666 PGLYRP4Q96LB8 373 aa13.32□□□□□ -0.28
PDZRN3-201ENST00000263666 ACTL10Q5JWF8 245 aa13.32□□□□□ -0.28
PDZRN3-201ENST00000263666 TCTEX1D1Q8N7M0 179 aa13.32□□□□□ -0.28
PDZRN3-201ENST00000263666 TMEM106BQ9NUM4 274 aa13.32□□□□□ -0.28
PDZRN3-201ENST00000263666 ONECUT1Q9UBC0 465 aa13.32□□□□□ -0.28
PDZRN3-201ENST00000263666 IGHV3OR16-8A0A075B7F1 116 aa13.32□□□□□ -0.28
PDZRN3-201ENST00000263666 KBTBD11-OT1A0A1B0GTJ5 212 aa13.32□□□□□ -0.28
PDZRN3-201ENST00000263666 LYNX1G3V0Z9 82 aa13.32□□□□□ -0.28
PDZRN3-201ENST00000263666 MMP23AO75900 390 aa13.32□□□□□ -0.28
PDZRN3-201ENST00000263666 LYNX1P0DP58 116 aa13.32□□□□□ -0.28
PDZRN3-201ENST00000263666 DNAJC4Q9NNZ3 241 aa13.32□□□□□ -0.28
PDZRN3-201ENST00000263666 MGAQ8IWI9 3026 aa13.32□□□□□ -0.28
PDZRN3-201ENST00000263666 C15orf61A6NNL5 157 aa13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 PMCHL1Q16048 86 aa13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 PIP4P1Q86T03 277 aa13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 OR5R1Q8NH85 324 aa13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 AP1S3Q96PC3 154 aa13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 GSX1Q9H4S2 264 aaPredicted RBP13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 WDR73Q6P4I2 378 aa13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 FAM222BQ8WU58 562 aa13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 TIMD4Q96H15 378 aa13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 PMCHL2Q9BQD1 86 aa13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 BOD1L1Q8NFC6 3051 aa13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 A8MWP6 167 aa13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 ZNF714Q96N38 554 aa13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 GNB4Q9HAV0 340 aa13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 SRRM5B3KS81 715 aa13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 CD24P25063 80 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms