RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 CDC42EP3Q9UKI2 254 aa17.85■□□□□ 0.45
UFD1-201ENST00000263202 CYSRT1A8MQ03 144 aa17.84■□□□□ 0.45
UFD1-201ENST00000263202 RGS13O14921 159 aa17.84■□□□□ 0.45
UFD1-201ENST00000263202 CRIP2P52943 208 aaPredicted RBP17.84■□□□□ 0.45
UFD1-201ENST00000263202 CD69Q07108 199 aa17.84■□□□□ 0.45
UFD1-201ENST00000263202 SCGB2A2Q13296 93 aa17.84■□□□□ 0.45
UFD1-201ENST00000263202 MLANAQ16655 118 aa17.84■□□□□ 0.45
UFD1-201ENST00000263202 ECSCRQ19T08 205 aa17.84■□□□□ 0.45
UFD1-201ENST00000263202 AKIRIN2Q53H80 203 aa17.84■□□□□ 0.45
UFD1-201ENST00000263202 UNQ5815/PRO19632Q6UWF5 114 aa17.84■□□□□ 0.45
UFD1-201ENST00000263202 ALKAL2Q6UX46 152 aa17.84■□□□□ 0.45
UFD1-201ENST00000263202 RBMS3Q6XE24 437 aaKnown RBP17.84■□□□□ 0.45
UFD1-201ENST00000263202 SLC35E3Q7Z769 313 aa17.84■□□□□ 0.45
UFD1-201ENST00000263202 HSD17B11Q8NBQ5 300 aa17.84■□□□□ 0.45
UFD1-201ENST00000263202 PHYHIPLQ96FC7 376 aa17.84■□□□□ 0.45
UFD1-201ENST00000263202 PARD6GQ9BYG4 376 aaPredicted RBP17.84■□□□□ 0.45
UFD1-201ENST00000263202 DEFA4P12838 97 aa17.84■□□□□ 0.45
UFD1-201ENST00000263202 SRD5A1P18405 259 aa17.84■□□□□ 0.45
UFD1-201ENST00000263202 SLC25A24Q6NUK1 477 aa17.84■□□□□ 0.45
UFD1-201ENST00000263202 MISP3Q96FF7 219 aa17.84■□□□□ 0.45
UFD1-201ENST00000263202 DUX5Q96PT3 197 aa17.84■□□□□ 0.45
UFD1-201ENST00000263202 WDR61Q9GZS3 305 aaKnown RBP17.84■□□□□ 0.45
UFD1-201ENST00000263202 GSX1Q9H4S2 264 aaPredicted RBP17.84■□□□□ 0.45
UFD1-201ENST00000263202 FNDC4Q9H6D8 234 aaPredicted RBP17.84■□□□□ 0.45
UFD1-201ENST00000263202 ANK3Q12955 4377 aaKnown RBP17.83■□□□□ 0.45
UFD1-201ENST00000263202 G3V318 75 aa17.83■□□□□ 0.44
UFD1-201ENST00000263202 CORTO00230 105 aa17.83■□□□□ 0.44
UFD1-201ENST00000263202 IFNA7P01567 189 aa17.83■□□□□ 0.44
UFD1-201ENST00000263202 IGF1P05019 195 aa17.83■□□□□ 0.44
UFD1-201ENST00000263202 MDKP21741 143 aaPredicted RBP17.83■□□□□ 0.44
UFD1-201ENST00000263202 GPX4P36969 197 aaPredicted RBP17.83■□□□□ 0.44
UFD1-201ENST00000263202 Q71RC1 249 aaPredicted RBP17.83■□□□□ 0.44
UFD1-201ENST00000263202 OR5T1Q8NG75 326 aa17.83■□□□□ 0.44
UFD1-201ENST00000263202 OR1L6Q8NGR2 347 aa17.83■□□□□ 0.44
UFD1-201ENST00000263202 TMEM68Q96MH6 324 aa17.83■□□□□ 0.44
UFD1-201ENST00000263202 FNDC10F2Z333 226 aa17.82■□□□□ 0.44
UFD1-201ENST00000263202 OPRK1P41145 380 aa17.82■□□□□ 0.44
UFD1-201ENST00000263202 C19orf54Q5BKX5 351 aa17.82■□□□□ 0.44
UFD1-201ENST00000263202 ZNF767PQ75MW2 155 aa17.82■□□□□ 0.44
UFD1-201ENST00000263202 FAM110DQ8TAY7 271 aaPredicted RBP17.82■□□□□ 0.44
UFD1-201ENST00000263202 SCGB1C1Q8TD33 95 aa17.82■□□□□ 0.44
UFD1-201ENST00000263202 CACNG8Q8WXS5 425 aa17.82■□□□□ 0.44
UFD1-201ENST00000263202 SMCO3A2RU48 225 aa17.82■□□□□ 0.44
UFD1-201ENST00000263202 PRH1P02810 166 aa17.82■□□□□ 0.44
UFD1-201ENST00000263202 ATP6V0CP27449 155 aa17.82■□□□□ 0.44
UFD1-201ENST00000263202 RUNX1Q01196 453 aa17.82■□□□□ 0.44
UFD1-201ENST00000263202 TREML4Q6UXN2 200 aa17.82■□□□□ 0.44
UFD1-201ENST00000263202 TMED6Q8WW62 240 aa17.82■□□□□ 0.44
UFD1-201ENST00000263202 SH3BGRL3Q9H299 93 aa17.82■□□□□ 0.44
UFD1-201ENST00000263202 NPVFQ9HCQ7 196 aa17.82■□□□□ 0.44
UFD1-201ENST00000263202 WDR83OSQ9Y284 106 aa17.82■□□□□ 0.44
UFD1-201ENST00000263202 DNAJC9-AS1A6NH13 148 aa17.81■□□□□ 0.44
UFD1-201ENST00000263202 SPP1P10451 314 aa17.81■□□□□ 0.44
UFD1-201ENST00000263202 GAMTQ14353 236 aa17.81■□□□□ 0.44
UFD1-201ENST00000263202 SLC16A13Q7RTY0 426 aa17.81■□□□□ 0.44
UFD1-201ENST00000263202 TAF15Q92804 592 aaKnown RBP eCLIP17.81■□□□□ 0.44
UFD1-201ENST00000263202 FANCD2OSQ96PS1 177 aa17.81■□□□□ 0.44
UFD1-201ENST00000263202 UBQLN2Q9UHD9 624 aa17.81■□□□□ 0.44
UFD1-201ENST00000263202 LINC00527Q9UJ94 153 aa17.81■□□□□ 0.44
UFD1-201ENST00000263202 RFNGQ9Y644 331 aa17.81■□□□□ 0.44
UFD1-201ENST00000263202 IGLV11-55A0A075B6I3 123 aa17.8■□□□□ 0.44
UFD1-201ENST00000263202 TRAV41A0A0B4J266 112 aa17.8■□□□□ 0.44
UFD1-201ENST00000263202 SCARB1Q8WTV0 552 aa17.8■□□□□ 0.44
UFD1-201ENST00000263202 SLC25A32Q9H2D1 315 aa17.8■□□□□ 0.44
UFD1-201ENST00000263202 FGF7P21781 194 aa17.79■□□□□ 0.44
UFD1-201ENST00000263202 OR2T6Q8NHC8 308 aa17.79■□□□□ 0.44
UFD1-201ENST00000263202 GNPNAT1Q96EK6 184 aaPredicted RBP17.79■□□□□ 0.44
UFD1-201ENST00000263202 ESM1Q9NQ30 184 aa17.79■□□□□ 0.44
UFD1-201ENST00000263202 INAFM1C9JVW0 142 aa17.79■□□□□ 0.44
UFD1-201ENST00000263202 MT-CO2P00403 227 aa17.79■□□□□ 0.44
UFD1-201ENST00000263202 SEC11BP0C7V7 166 aa17.79■□□□□ 0.44
UFD1-201ENST00000263202 AKR1C1Q04828 323 aa17.79■□□□□ 0.44
UFD1-201ENST00000263202 ETFRF1Q6IPR1 90 aa17.79■□□□□ 0.44
UFD1-201ENST00000263202 EIF5AL1Q6IS14 154 aaKnown RBP17.79■□□□□ 0.44
UFD1-201ENST00000263202 BTNL8Q6UX41 500 aa17.79■□□□□ 0.44
UFD1-201ENST00000263202 RSG1Q9BU20 258 aa17.79■□□□□ 0.44
UFD1-201ENST00000263202 NPFFR1Q9GZQ6 430 aa17.79■□□□□ 0.44
UFD1-201ENST00000263202 I3L2K1 104 aa17.78■□□□□ 0.44
UFD1-201ENST00000263202 AP4M1O00189 453 aa17.78■□□□□ 0.44
UFD1-201ENST00000263202 IGHV3-48P01763 117 aa17.78■□□□□ 0.44
UFD1-201ENST00000263202 FAM74A1Q5RGS3 127 aa17.78■□□□□ 0.44
UFD1-201ENST00000263202 SLC35E1Q96K37 410 aa17.78■□□□□ 0.44
UFD1-201ENST00000263202 NOL4LQ96MY1 436 aaPredicted RBP17.78■□□□□ 0.44
UFD1-201ENST00000263202 PRSS22Q9GZN4 317 aa17.78■□□□□ 0.44
UFD1-201ENST00000263202 LSM4Q9Y4Z0 139 aaKnown RBP17.78■□□□□ 0.44
UFD1-201ENST00000263202 HIVEP1P15822 2718 aa17.78■□□□□ 0.44
UFD1-201ENST00000263202 HIVEP2P31629 2446 aa17.78■□□□□ 0.44
UFD1-201ENST00000263202 RPS10-NUDT3A0A1W2PQS6 291 aa17.77■□□□□ 0.44
UFD1-201ENST00000263202 CYB5BO43169 146 aa17.77■□□□□ 0.44
UFD1-201ENST00000263202 SOX15O60248 233 aa17.77■□□□□ 0.44
UFD1-201ENST00000263202 KLK9Q2XQG4 91 aa17.77■□□□□ 0.44
UFD1-201ENST00000263202 TMEM144Q7Z5S9 345 aa17.77■□□□□ 0.44
UFD1-201ENST00000263202 PLA2G2EQ9NZK7 142 aa17.77■□□□□ 0.44
UFD1-201ENST00000263202 MRPL36Q9P0J6 103 aaKnown RBP17.77■□□□□ 0.44
UFD1-201ENST00000263202 KLK9Q9UKQ9 250 aa17.77■□□□□ 0.44
UFD1-201ENST00000263202 IGHV3-21A0A0B4J1V1 117 aa17.77■□□□□ 0.43
UFD1-201ENST00000263202 TRIM77I1YAP6 450 aa17.77■□□□□ 0.43
UFD1-201ENST00000263202 K7EIM0 57 aa17.77■□□□□ 0.43
UFD1-201ENST00000263202 TEPPQ6URK8 271 aa17.77■□□□□ 0.43
UFD1-201ENST00000263202 NPCDR1Q9BY65 106 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms