RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 HNF1AP20823 631 aa13.25□□□□□ -0.29
HLA-F-216ENST00000259951 MDKP21741 143 aaPredicted RBP13.25□□□□□ -0.29
HLA-F-216ENST00000259951 S100A1P23297 94 aa13.25□□□□□ -0.29
HLA-F-216ENST00000259951 IER3P46695 156 aa13.25□□□□□ -0.29
HLA-F-216ENST00000259951 SERF2P84101 59 aa13.25□□□□□ -0.29
HLA-F-216ENST00000259951 RUNX1Q01196 453 aa13.25□□□□□ -0.29
HLA-F-216ENST00000259951 RAB31Q13636 194 aa13.25□□□□□ -0.29
HLA-F-216ENST00000259951 CTRB2Q6GPI1 263 aa13.25□□□□□ -0.29
HLA-F-216ENST00000259951 BTNL8Q6UX41 500 aa13.25□□□□□ -0.29
HLA-F-216ENST00000259951 SPNS3Q6ZMD2 512 aa13.25□□□□□ -0.29
HLA-F-216ENST00000259951 C22orf15Q8WYQ4 148 aa13.25□□□□□ -0.29
HLA-F-216ENST00000259951 SLC35E1Q96K37 410 aa13.25□□□□□ -0.29
HLA-F-216ENST00000259951 TMEM68Q96MH6 324 aa13.25□□□□□ -0.29
HLA-F-216ENST00000259951 CELSR1Q9NYQ6 3014 aa13.25□□□□□ -0.29
HLA-F-216ENST00000259951 F8P00451 2351 aa13.25□□□□□ -0.29
HLA-F-216ENST00000259951 MDFIC2A0A1B0GVS7 189 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 TRIM77I1YAP6 450 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 SOX15O60248 233 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 CRYGCP07315 174 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 NMBP08949 121 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 OPRK1P41145 380 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 AKR1C1Q04828 323 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 ARSJQ5FYB0 599 aaPredicted RBP13.24□□□□□ -0.29
HLA-F-216ENST00000259951 Q6YL49 198 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 SLC16A13Q7RTY0 426 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 CENPVQ7Z7K6 275 aaPredicted RBP13.24□□□□□ -0.29
HLA-F-216ENST00000259951 SGMS2Q8NHU3 365 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 SAT2Q96F10 170 aaPredicted RBP13.24□□□□□ -0.29
HLA-F-216ENST00000259951 FAM103A1Q9BTL3 118 aaKnown RBP13.24□□□□□ -0.29
HLA-F-216ENST00000259951 PRDM13Q9H4Q3 707 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 YAE1D1Q9NRH1 226 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 KCNIP2Q9NS61 270 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 FAM157CP0CG43 387 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 SRP14P37108 136 aaKnown RBP13.24□□□□□ -0.29
HLA-F-216ENST00000259951 BLOC1S1P78537 153 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 NDPQ00604 133 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 KRTAP1-1Q07627 177 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 AKR1C8PQ5T2L2 129 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 TEPPQ6URK8 271 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 TREML4Q6UXN2 200 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 TMEM144Q7Z5S9 345 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 TTC9CQ8N5M4 171 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 MISP3Q96FF7 219 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 HSPB9Q9BQS6 159 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 RSG1Q9BU20 258 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 WNT10AQ9GZT5 417 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 PARP11Q9NR21 331 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 FBXO7Q9Y3I1 522 aa13.24□□□□□ -0.29
HLA-F-216ENST00000259951 ZANQ9Y493 2812 aa13.23□□□□□ -0.29
HLA-F-216ENST00000259951 ZNF705EA8MWA4 302 aaPredicted RBP13.23□□□□□ -0.29
HLA-F-216ENST00000259951 PRH1P02810 166 aa13.23□□□□□ -0.29
HLA-F-216ENST00000259951 TMEM182Q6ZP80 229 aaPredicted RBP13.23□□□□□ -0.29
HLA-F-216ENST00000259951 NPCDR1Q9BY65 106 aa13.23□□□□□ -0.29
HLA-F-216ENST00000259951 IGHV4-59P01825 116 aa13.22□□□□□ -0.29
HLA-F-216ENST00000259951 SCGB2A2Q13296 93 aa13.22□□□□□ -0.29
HLA-F-216ENST00000259951 GAMTQ14353 236 aa13.22□□□□□ -0.29
HLA-F-216ENST00000259951 DPPA3Q6W0C5 159 aa13.22□□□□□ -0.29
HLA-F-216ENST00000259951 LFNGQ8NES3 379 aa13.22□□□□□ -0.29
HLA-F-216ENST00000259951 ATP6V0E1O15342 81 aa13.21□□□□□ -0.29
HLA-F-216ENST00000259951 MBP02144 154 aa13.21□□□□□ -0.29
HLA-F-216ENST00000259951 AMY1AP04745 511 aa13.21□□□□□ -0.29
HLA-F-216ENST00000259951 EGR2P11161 476 aaPredicted RBP13.21□□□□□ -0.29
HLA-F-216ENST00000259951 MFAP2P55001 183 aa13.21□□□□□ -0.29
HLA-F-216ENST00000259951 AKIRIN2Q53H80 203 aa13.21□□□□□ -0.29
HLA-F-216ENST00000259951 ASPHD1Q5U4P2 390 aa13.21□□□□□ -0.29
HLA-F-216ENST00000259951 UNQ5815/PRO19632Q6UWF5 114 aa13.21□□□□□ -0.29
HLA-F-216ENST00000259951 PCNPQ8WW12 178 aaKnown RBP13.21□□□□□ -0.29
HLA-F-216ENST00000259951 TMUB1Q9BVT8 246 aa13.21□□□□□ -0.29
HLA-F-216ENST00000259951 THYN1Q9P016 225 aa13.21□□□□□ -0.29
HLA-F-216ENST00000259951 VPREB3Q9UKI3 123 aa13.21□□□□□ -0.29
HLA-F-216ENST00000259951 LSM4Q9Y4Z0 139 aaKnown RBP13.21□□□□□ -0.29
HLA-F-216ENST00000259951 LINC00862A6NCI5 91 aa13.21□□□□□ -0.3
HLA-F-216ENST00000259951 HIVEP1P15822 2718 aa13.21□□□□□ -0.3
HLA-F-216ENST00000259951 HIST1H1BP16401 226 aaKnown RBP13.21□□□□□ -0.3
HLA-F-216ENST00000259951 CAMLGP49069 296 aa13.21□□□□□ -0.3
HLA-F-216ENST00000259951 FNDC4Q9H6D8 234 aaPredicted RBP13.21□□□□□ -0.3
HLA-F-216ENST00000259951 TMEM160Q9NX00 188 aa13.21□□□□□ -0.3
HLA-F-216ENST00000259951 CRIP2P52943 208 aaPredicted RBP13.2□□□□□ -0.3
HLA-F-216ENST00000259951 C9orf152Q5JTZ5 239 aa13.2□□□□□ -0.3
HLA-F-216ENST00000259951 FAM110DQ8TAY7 271 aaPredicted RBP13.2□□□□□ -0.3
HLA-F-216ENST00000259951 ZNF48Q96MX3 618 aaPredicted RBP13.2□□□□□ -0.3
HLA-F-216ENST00000259951 PLA2G2EQ9NZK7 142 aa13.2□□□□□ -0.3
HLA-F-216ENST00000259951 PFDN2Q9UHV9 154 aa13.2□□□□□ -0.3
HLA-F-216ENST00000259951 ZNF469Q96JG9 3925 aaPredicted RBP13.19□□□□□ -0.3
HLA-F-216ENST00000259951 MT-CO2P00403 227 aa13.19□□□□□ -0.3
HLA-F-216ENST00000259951 IGHG2P01859 326 aa13.19□□□□□ -0.3
HLA-F-216ENST00000259951 MLANAQ16655 118 aa13.19□□□□□ -0.3
HLA-F-216ENST00000259951 ECSCRQ19T08 205 aa13.19□□□□□ -0.3
HLA-F-216ENST00000259951 SLC35E3Q7Z769 313 aa13.19□□□□□ -0.3
HLA-F-216ENST00000259951 SLC7A5P1Q8MH63 180 aa13.19□□□□□ -0.3
HLA-F-216ENST00000259951 ACY3Q96HD9 319 aa13.19□□□□□ -0.3
HLA-F-216ENST00000259951 MGST2Q99735 147 aa13.19□□□□□ -0.3
HLA-F-216ENST00000259951 MED9Q9NWA0 146 aa13.19□□□□□ -0.3
HLA-F-216ENST00000259951 RFNGQ9Y644 331 aa13.19□□□□□ -0.3
HLA-F-216ENST00000259951 SH2D7A6NKC9 451 aaPredicted RBP13.18□□□□□ -0.3
HLA-F-216ENST00000259951 AGPAT2O15120 278 aa13.18□□□□□ -0.3
HLA-F-216ENST00000259951 TMEM41BQ5BJD5 291 aa13.18□□□□□ -0.3
HLA-F-216ENST00000259951 FFAR4Q5NUL3 377 aa13.18□□□□□ -0.3
HLA-F-216ENST00000259951 RBMS3Q6XE24 437 aaKnown RBP13.18□□□□□ -0.3
HLA-F-216ENST00000259951 Q6ZRG5 221 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms