RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 SAA1P0DJI8 122 aaPredicted RBP3.91□□□□□ -1.78
USP44-201ENST00000258499 CD99P14209 185 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 HINT1P49773 126 aaPredicted RBP3.91□□□□□ -1.78
USP44-201ENST00000258499 FOXL1Q12952 345 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 ZNF124Q15973 351 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 LRRC10Q5BKY1 277 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 FAM90A1Q86YD7 464 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 KLHDC1Q8N7A1 406 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 SSBP4Q9BWG4 385 aaPredicted RBP3.91□□□□□ -1.78
USP44-201ENST00000258499 SNHG12Q9BXW3 62 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 MRPL20Q9BYC9 149 aaKnown RBP3.91□□□□□ -1.78
USP44-201ENST00000258499 PARD6GQ9BYG4 376 aaPredicted RBP3.91□□□□□ -1.78
USP44-201ENST00000258499 IFI27L2Q9H2X8 130 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 DNAJC4Q9NNZ3 241 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 ZNF71Q9NQZ8 489 aaPredicted RBP3.91□□□□□ -1.78
USP44-201ENST00000258499 DCAF16Q9NXF7 216 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 POLR3KQ9Y2Y1 108 aaPredicted RBP3.91□□□□□ -1.78
USP44-201ENST00000258499 GOLT1BQ9Y3E0 138 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 PGPA6NDG6 321 aa3.9□□□□□ -1.78
USP44-201ENST00000258499 F2Z2F3 143 aa3.9□□□□□ -1.78
USP44-201ENST00000258499 TCF21O43680 179 aa3.9□□□□□ -1.78
USP44-201ENST00000258499 IGKV3-15P01624 115 aa3.9□□□□□ -1.78
USP44-201ENST00000258499 ZNF883P0CG24 379 aa3.9□□□□□ -1.78
USP44-201ENST00000258499 GLRXP35754 106 aa3.9□□□□□ -1.78
USP44-201ENST00000258499 CDKN1AP38936 164 aa3.9□□□□□ -1.78
USP44-201ENST00000258499 BRWD1-AS2P59051 145 aa3.9□□□□□ -1.78
USP44-201ENST00000258499 GNG5P63218 68 aa3.9□□□□□ -1.78
USP44-201ENST00000258499 RPRMLQ8N4K4 120 aa3.9□□□□□ -1.78
USP44-201ENST00000258499 ST6GALNAC3Q8NDV1 305 aa3.9□□□□□ -1.78
USP44-201ENST00000258499 GNB4Q9HAV0 340 aa3.9□□□□□ -1.78
USP44-201ENST00000258499 C20orf202A1L168 122 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 PMS2P5A8MQ11 134 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 CDX4O14627 284 aaPredicted RBP3.9□□□□□ -1.79
USP44-201ENST00000258499 FRMD6-AS1P0C7T7 363 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 TCTAP57738 103 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 VAMP3Q15836 100 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 RNF151Q2KHN1 245 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 SPRNQ5BIV9 151 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 TMEM144Q7Z5S9 345 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 C11orf42Q8N5U0 333 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 OR1L4Q8NGR5 311 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 PRR7Q8TB68 274 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 RNASEH2CQ8TDP1 164 aaKnown RBP3.9□□□□□ -1.79
USP44-201ENST00000258499 ZNF714Q96N38 554 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 GUCD1Q96NT3 240 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 NRN1Q9NPD7 142 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 C15orf65H3BRN8 121 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 HLA-DQA1P01909 254 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 MT-ND6P03923 174 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 NUTF2P61970 127 aaKnown RBP3.9□□□□□ -1.79
USP44-201ENST00000258499 TDRG1Q3Y452 100 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 UTF1Q5T230 341 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 C1orf194Q5T5A4 169 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 LEMD1Q68G75 181 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 LCN12Q6JVE5 192 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 VSTM2AQ8TAG5 236 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 RAB1CQ92928 201 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 ST6GALNAC6Q969X2 333 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 PYGO2Q9BRQ0 406 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 C2orf88Q9BSF0 95 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 ASCL3Q9NQ33 180 aa3.9□□□□□ -1.79
USP44-201ENST00000258499 SERTM2A0A1B0GWG4 89 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 DPRXA6NFQ7 191 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 M0QZK8 103 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 MMP23AO75900 390 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 P01737 135 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 COL8A1P27658 744 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 VDAC2P45880 294 aaPredicted RBP3.89□□□□□ -1.79
USP44-201ENST00000258499 PTTG1IPP53801 180 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 COL5A1-AS1Q5SY13 56 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 Q6ZWC4 215 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 CENPVQ7Z7K6 275 aaPredicted RBP3.89□□□□□ -1.79
USP44-201ENST00000258499 C1orf162Q8NEQ5 155 aaPredicted RBP3.89□□□□□ -1.79
USP44-201ENST00000258499 TNFRSF19Q9NS68 423 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 PPIAL4AQ9Y536 164 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 OTOGLQ3ZCN5 2332 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 PPIAL4EA0A075B759 164 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 TMSB15BA0A087X1C1 80 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 A0A1W2PN81 502 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 PPIAL4DF5H284 164 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 MKRN2OSH3BPM6 223 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 UPK2O00526 184 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 DLL1O00548 723 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 PROP1O75360 226 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 AMY1AP04745 511 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 TYMSP04818 313 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 PPIAL4FP0DN26 164 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 HIST1H1EP10412 219 aaKnown RBP3.89□□□□□ -1.79
USP44-201ENST00000258499 TMEM11P17152 192 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 MMDQ15546 238 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 TIMM23BQ5SRD1 257 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 DMRTA1Q5VZB9 504 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 ERASQ7Z444 233 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 LINC00305Q7Z4B0 112 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 OR4B1Q8NGF8 309 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 Q8TCH9 128 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 PGLYRP4Q96LB8 373 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 ZNF430Q9H8G1 570 aaPredicted RBP3.89□□□□□ -1.79
USP44-201ENST00000258499 TEX50A0A1B0GTY4 177 aa3.89□□□□□ -1.79
USP44-201ENST00000258499 ZNF891A8MT65 544 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms