RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 NDUFA6P56556 154 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 VMA21Q3ZAQ7 101 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 SLC16A13Q7RTY0 426 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 LINC01551Q86U37 167 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 ZNF114Q8NC26 417 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 DOK5Q9P104 306 aa17.47■□□□□ 0.39
CLN6-201ENST00000249806 HIVEP3Q5T1R4 2406 aa17.46■□□□□ 0.39
CLN6-201ENST00000249806 F6UZH7 168 aa17.46■□□□□ 0.39
CLN6-201ENST00000249806 INS-IGF2F8WCM5 200 aa17.46■□□□□ 0.39
CLN6-201ENST00000249806 COX7A1P24310 79 aa17.46■□□□□ 0.39
CLN6-201ENST00000249806 GALR1P47211 349 aa17.46■□□□□ 0.39
CLN6-201ENST00000249806 PRRX1P54821 245 aa17.46■□□□□ 0.39
CLN6-201ENST00000249806 SSBP2P81877 361 aaPredicted RBP17.46■□□□□ 0.39
CLN6-201ENST00000249806 FNDC4Q9H6D8 234 aaPredicted RBP17.46■□□□□ 0.39
CLN6-201ENST00000249806 FUT9Q9Y231 359 aa17.46■□□□□ 0.39
CLN6-201ENST00000249806 ITPR1Q14643 2758 aa17.46■□□□□ 0.38
CLN6-201ENST00000249806 TRBV20OR9-2A0A075B6H5 130 aa17.45■□□□□ 0.38
CLN6-201ENST00000249806 BUB1B-PAK6H3BSN5 160 aa17.45■□□□□ 0.38
CLN6-201ENST00000249806 A0A1W2PPI3 338 aa17.45■□□□□ 0.38
CLN6-201ENST00000249806 CLN5O75503 358 aa17.45■□□□□ 0.38
CLN6-201ENST00000249806 LGALS7P47929 136 aa17.45■□□□□ 0.38
CLN6-201ENST00000249806 C4orf17Q53FE4 359 aa17.45■□□□□ 0.38
CLN6-201ENST00000249806 CACNG8Q8WXS5 425 aa17.45■□□□□ 0.38
CLN6-201ENST00000249806 FRZBQ92765 325 aa17.45■□□□□ 0.38
CLN6-201ENST00000249806 TNFRSF14Q92956 283 aa17.45■□□□□ 0.38
CLN6-201ENST00000249806 SLC35E1Q96K37 410 aa17.45■□□□□ 0.38
CLN6-201ENST00000249806 CLEC7AQ9BXN2 247 aa17.45■□□□□ 0.38
CLN6-201ENST00000249806 INSIG2Q9Y5U4 225 aa17.45■□□□□ 0.38
CLN6-201ENST00000249806 FSTL3O95633 263 aa17.44■□□□□ 0.38
CLN6-201ENST00000249806 TXNDC17Q9BRA2 123 aa17.44■□□□□ 0.38
CLN6-201ENST00000249806 SVEP1Q4LDE5 3571 aa17.44■□□□□ 0.38
CLN6-201ENST00000249806 IGHV1-3A0A0C4DH29 117 aa17.44■□□□□ 0.38
CLN6-201ENST00000249806 SOD3P08294 240 aa17.44■□□□□ 0.38
CLN6-201ENST00000249806 GPX4P36969 197 aaPredicted RBP17.44■□□□□ 0.38
CLN6-201ENST00000249806 PSG5Q15238 335 aa17.44■□□□□ 0.38
CLN6-201ENST00000249806 TMEM37Q8WXS4 190 aa17.44■□□□□ 0.38
CLN6-201ENST00000249806 ANAPC16Q96DE5 110 aa17.44■□□□□ 0.38
CLN6-201ENST00000249806 OR5B12Q96R08 314 aa17.44■□□□□ 0.38
CLN6-201ENST00000249806 RAB1BQ9H0U4 201 aa17.44■□□□□ 0.38
CLN6-201ENST00000249806 TRGC1P0CF51 173 aa17.43■□□□□ 0.38
CLN6-201ENST00000249806 APELAP0DMC3 54 aa17.43■□□□□ 0.38
CLN6-201ENST00000249806 OR8B3Q8NGG8 313 aa17.43■□□□□ 0.38
CLN6-201ENST00000249806 ZNF503Q96F45 646 aa17.43■□□□□ 0.38
CLN6-201ENST00000249806 OR8B2Q96RD0 313 aa17.43■□□□□ 0.38
CLN6-201ENST00000249806 CSMD1Q96PZ7 3565 aa17.43■□□□□ 0.38
CLN6-201ENST00000249806 ASH1LQ9NR48 2969 aaKnown RBP17.43■□□□□ 0.38
CLN6-201ENST00000249806 ONECUT1Q9UBC0 465 aa17.43■□□□□ 0.38
CLN6-201ENST00000249806 MT-CO2P00403 227 aa17.42■□□□□ 0.38
CLN6-201ENST00000249806 HOXA5P20719 270 aa17.42■□□□□ 0.38
CLN6-201ENST00000249806 HCP5Q6MZN7 132 aa17.42■□□□□ 0.38
CLN6-201ENST00000249806 NPIPB3Q92617 1050 aa17.42■□□□□ 0.38
CLN6-201ENST00000249806 PYGO2Q9BRQ0 406 aa17.42■□□□□ 0.38
CLN6-201ENST00000249806 CBLN4Q9NTU7 201 aa17.42■□□□□ 0.38
CLN6-201ENST00000249806 MRPL36Q9P0J6 103 aaKnown RBP17.42■□□□□ 0.38
CLN6-201ENST00000249806 C22orf46C9J442 243 aa17.41■□□□□ 0.38
CLN6-201ENST00000249806 PHOX2AO14813 284 aa17.41■□□□□ 0.38
CLN6-201ENST00000249806 HNF1AP20823 631 aa17.41■□□□□ 0.38
CLN6-201ENST00000249806 S100PP25815 95 aa17.41■□□□□ 0.38
CLN6-201ENST00000249806 PNKDQ8N490 385 aa17.41■□□□□ 0.38
CLN6-201ENST00000249806 MIOXQ9UGB7 285 aa17.41■□□□□ 0.38
CLN6-201ENST00000249806 A0A1W2PPQ1 181 aa17.41■□□□□ 0.38
CLN6-201ENST00000249806 S100A8P05109 93 aa17.41■□□□□ 0.38
CLN6-201ENST00000249806 SUB1P53999 127 aaKnown RBP eCLIP17.41■□□□□ 0.38
CLN6-201ENST00000249806 TNXAQ16473 311 aa17.41■□□□□ 0.38
CLN6-201ENST00000249806 PRSS8Q16651 343 aa17.41■□□□□ 0.38
CLN6-201ENST00000249806 MORN5Q5VZ52 161 aa17.41■□□□□ 0.38
CLN6-201ENST00000249806 RUSC1-AS1Q66K80 236 aa17.41■□□□□ 0.38
CLN6-201ENST00000249806 C19orf35Q6ZS72 473 aa17.41■□□□□ 0.38
CLN6-201ENST00000249806 TEX45Q8NA69 505 aa17.41■□□□□ 0.38
CLN6-201ENST00000249806 BEND2Q8NDZ0 799 aa17.41■□□□□ 0.38
CLN6-201ENST00000249806 RNASEH2CQ8TDP1 164 aaKnown RBP17.41■□□□□ 0.38
CLN6-201ENST00000249806 TECRQ9NZ01 308 aaKnown RBP17.41■□□□□ 0.38
CLN6-201ENST00000249806 OR7C2O60412 319 aa17.4■□□□□ 0.38
CLN6-201ENST00000249806 OR5G3P0C626 314 aa17.4■□□□□ 0.38
CLN6-201ENST00000249806 OR10J4P0C629 311 aa17.4■□□□□ 0.38
CLN6-201ENST00000249806 ZNF90Q03938 601 aa17.4■□□□□ 0.38
CLN6-201ENST00000249806 C8orf46Q8TAG6 207 aa17.4■□□□□ 0.38
CLN6-201ENST00000249806 ABCA1O95477 2261 aa17.4■□□□□ 0.38
CLN6-201ENST00000249806 IGLC7A0M8Q6 106 aa17.4■□□□□ 0.38
CLN6-201ENST00000249806 IFITM10A6NMD0 228 aa17.4■□□□□ 0.38
CLN6-201ENST00000249806 CRYGBP07316 175 aa17.4■□□□□ 0.38
CLN6-201ENST00000249806 LDLRAD2Q5SZI1 272 aa17.4■□□□□ 0.38
CLN6-201ENST00000249806 C11orf71Q6IPW1 123 aa17.4■□□□□ 0.38
CLN6-201ENST00000249806 OCC1Q8TAD7 63 aa17.4■□□□□ 0.38
CLN6-201ENST00000249806 RPEQ96AT9 228 aa17.4■□□□□ 0.38
CLN6-201ENST00000249806 SIGLEC9Q9Y336 463 aa17.4■□□□□ 0.38
CLN6-201ENST00000249806 AREGP15514 252 aa17.39■□□□□ 0.37
CLN6-201ENST00000249806 FAM3BP58499 235 aaPredicted RBP17.39■□□□□ 0.37
CLN6-201ENST00000249806 ARF6P62330 175 aa17.39■□□□□ 0.37
CLN6-201ENST00000249806 SLC25A33Q9BSK2 321 aa17.39■□□□□ 0.37
CLN6-201ENST00000249806 SRD5A3Q9H8P0 318 aa17.39■□□□□ 0.37
CLN6-201ENST00000249806 TRAV5A0A0B4J249 113 aa17.39■□□□□ 0.37
CLN6-201ENST00000249806 PSMB11A5LHX3 300 aa17.39■□□□□ 0.37
CLN6-201ENST00000249806 RBP4P02753 201 aa17.39■□□□□ 0.37
CLN6-201ENST00000249806 LIPFP07098 398 aa17.39■□□□□ 0.37
CLN6-201ENST00000249806 GFI1BQ5VTD9 330 aa17.39■□□□□ 0.37
CLN6-201ENST00000249806 MMD2Q8IY49 270 aa17.39■□□□□ 0.37
CLN6-201ENST00000249806 LY6G5BQ8NDX9 201 aa17.39■□□□□ 0.37
CLN6-201ENST00000249806 IGKV1D-37A0A075B6S9 117 aa17.38■□□□□ 0.37
CLN6-201ENST00000249806 MFAP2P55001 183 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms