RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 HTR1DP28221 377 aa18.39■□□□□ 0.54
HOXD9-201ENST00000249499 TPTE2P1Q5T6R2 138 aa18.39■□□□□ 0.54
HOXD9-201ENST00000249499 PARLQ9H300 379 aa18.39■□□□□ 0.54
HOXD9-201ENST00000249499 TENM4Q6N022 2769 aa18.39■□□□□ 0.53
HOXD9-201ENST00000249499 IGKV1OR2-108A0A075B7D4 117 aa18.39■□□□□ 0.53
HOXD9-201ENST00000249499 A0A1W2PPI3 338 aa18.39■□□□□ 0.53
HOXD9-201ENST00000249499 RPL27AP46776 148 aaKnown RBP18.39■□□□□ 0.53
HOXD9-201ENST00000249499 EFNA4P52798 201 aa18.39■□□□□ 0.53
HOXD9-201ENST00000249499 C10orf55Q5SWW7 151 aa18.39■□□□□ 0.53
HOXD9-201ENST00000249499 TPSG1Q9NRR2 321 aa18.39■□□□□ 0.53
HOXD9-201ENST00000249499 DPM3Q9P2X0 92 aa18.39■□□□□ 0.53
HOXD9-201ENST00000249499 VENTXO95231 258 aa18.38■□□□□ 0.53
HOXD9-201ENST00000249499 OR10J1P30954 320 aa18.38■□□□□ 0.53
HOXD9-201ENST00000249499 PAX2Q02962 417 aa18.38■□□□□ 0.53
HOXD9-201ENST00000249499 ETFRF1Q6IPR1 90 aa18.38■□□□□ 0.53
HOXD9-201ENST00000249499 SEPSECSQ9HD40 501 aaKnown RBP18.38■□□□□ 0.53
HOXD9-201ENST00000249499 ODF3BA8MYP8 253 aa18.37■□□□□ 0.53
HOXD9-201ENST00000249499 TSPAN9O75954 239 aa18.37■□□□□ 0.53
HOXD9-201ENST00000249499 GCHFRP30047 84 aa18.37■□□□□ 0.53
HOXD9-201ENST00000249499 COMPP49747 757 aaPredicted RBP18.37■□□□□ 0.53
HOXD9-201ENST00000249499 RND2P52198 227 aa18.37■□□□□ 0.53
HOXD9-201ENST00000249499 DLX1P56177 255 aa18.37■□□□□ 0.53
HOXD9-201ENST00000249499 ARF6P62330 175 aa18.37■□□□□ 0.53
HOXD9-201ENST00000249499 PPP1R27Q86WC6 154 aa18.37■□□□□ 0.53
HOXD9-201ENST00000249499 C1QL4Q86Z23 238 aa18.37■□□□□ 0.53
HOXD9-201ENST00000249499 RNF2Q99496 336 aa18.37■□□□□ 0.53
HOXD9-201ENST00000249499 SRSF8Q9BRL6 282 aaKnown RBP18.37■□□□□ 0.53
HOXD9-201ENST00000249499 FUT9Q9Y231 359 aa18.37■□□□□ 0.53
HOXD9-201ENST00000249499 UBR5O95071 2799 aaPredicted RBP18.37■□□□□ 0.53
HOXD9-201ENST00000249499 IGLC7A0M8Q6 106 aa18.37■□□□□ 0.53
HOXD9-201ENST00000249499 CLDN34H7C241 214 aa18.37■□□□□ 0.53
HOXD9-201ENST00000249499 HABP2Q14520 560 aaPredicted RBP18.37■□□□□ 0.53
HOXD9-201ENST00000249499 RPUSD4Q96CM3 377 aaKnown RBP18.37■□□□□ 0.53
HOXD9-201ENST00000249499 UBTD1Q9HAC8 227 aa18.37■□□□□ 0.53
HOXD9-201ENST00000249499 COL12A1Q99715 3063 aa18.37■□□□□ 0.53
HOXD9-201ENST00000249499 SPTBN1Q01082 2364 aaKnown RBP18.37■□□□□ 0.53
HOXD9-201ENST00000249499 OR5G3P0C626 314 aa18.36■□□□□ 0.53
HOXD9-201ENST00000249499 THAP8Q8NA92 274 aa18.36■□□□□ 0.53
HOXD9-201ENST00000249499 METTL1Q9UBP6 276 aaKnown RBP18.36■□□□□ 0.53
HOXD9-201ENST00000249499 CORTO00230 105 aa18.35■□□□□ 0.53
HOXD9-201ENST00000249499 PLA2G2AP14555 144 aa18.35■□□□□ 0.53
HOXD9-201ENST00000249499 ELOBQ15370 118 aa18.35■□□□□ 0.53
HOXD9-201ENST00000249499 TNXAQ16473 311 aa18.35■□□□□ 0.53
HOXD9-201ENST00000249499 MRPL32Q9BYC8 188 aaKnown RBP18.35■□□□□ 0.53
HOXD9-201ENST00000249499 SAV1Q9H4B6 383 aaPredicted RBP18.35■□□□□ 0.53
HOXD9-201ENST00000249499 DOK5Q9P104 306 aa18.35■□□□□ 0.53
HOXD9-201ENST00000249499 CDKN1AP38936 164 aa18.35■□□□□ 0.53
HOXD9-201ENST00000249499 TAS2R45P59539 299 aa18.35■□□□□ 0.53
HOXD9-201ENST00000249499 ZNF674Q2M3X9 581 aa18.35■□□□□ 0.53
HOXD9-201ENST00000249499 FAM78BQ5VT40 261 aa18.35■□□□□ 0.53
HOXD9-201ENST00000249499 CST9LP1Q5W188 147 aa18.35■□□□□ 0.53
HOXD9-201ENST00000249499 TMEM167BQ9NRX6 74 aa18.35■□□□□ 0.53
HOXD9-201ENST00000249499 TECRQ9NZ01 308 aaKnown RBP18.35■□□□□ 0.53
HOXD9-201ENST00000249499 OOSP1A8MZH6 123 aa18.34■□□□□ 0.53
HOXD9-201ENST00000249499 CRYGCP07315 174 aa18.34■□□□□ 0.53
HOXD9-201ENST00000249499 SELENOTP62341 195 aa18.34■□□□□ 0.53
HOXD9-201ENST00000249499 RPL23P62829 140 aaKnown RBP18.34■□□□□ 0.53
HOXD9-201ENST00000249499 PQLC2Q6ZP29 291 aa18.34■□□□□ 0.53
HOXD9-201ENST00000249499 OR1P1Q8NH06 330 aa18.34■□□□□ 0.53
HOXD9-201ENST00000249499 FNDC4Q9H6D8 234 aaPredicted RBP18.34■□□□□ 0.53
HOXD9-201ENST00000249499 CNTFRP26992 372 aa18.33■□□□□ 0.53
HOXD9-201ENST00000249499 MLANAQ16655 118 aa18.33■□□□□ 0.53
HOXD9-201ENST00000249499 HCP5Q6MZN7 132 aa18.33■□□□□ 0.53
HOXD9-201ENST00000249499 ZFP82Q8N141 532 aa18.33■□□□□ 0.53
HOXD9-201ENST00000249499 C19orf84I3L1E1 186 aa18.33■□□□□ 0.52
HOXD9-201ENST00000249499 TIMM23O14925 209 aa18.33■□□□□ 0.52
HOXD9-201ENST00000249499 IGHV2-5P01817 119 aa18.33■□□□□ 0.52
HOXD9-201ENST00000249499 ATP5G3P48201 142 aa18.33■□□□□ 0.52
HOXD9-201ENST00000249499 PRB3Q04118 309 aaPredicted RBP18.33■□□□□ 0.52
HOXD9-201ENST00000249499 OR2T6Q8NHC8 308 aa18.33■□□□□ 0.52
HOXD9-201ENST00000249499 ACY3Q96HD9 319 aa18.33■□□□□ 0.52
HOXD9-201ENST00000249499 TCRBV4S1A1TA0A5B7 111 aa18.32■□□□□ 0.52
HOXD9-201ENST00000249499 AREGP15514 252 aa18.32■□□□□ 0.52
HOXD9-201ENST00000249499 UBE2G2P60604 165 aa18.32■□□□□ 0.52
HOXD9-201ENST00000249499 ADIRFQ15847 76 aa18.32■□□□□ 0.52
HOXD9-201ENST00000249499 SPATA31B1PQ5VZV4 182 aa18.32■□□□□ 0.52
HOXD9-201ENST00000249499 C2CD4CQ8TF44 421 aa18.32■□□□□ 0.52
HOXD9-201ENST00000249499 Q8WTZ3 238 aa18.32■□□□□ 0.52
HOXD9-201ENST00000249499 CFHR4Q92496 578 aa18.32■□□□□ 0.52
HOXD9-201ENST00000249499 KLF2Q9Y5W3 355 aaPredicted RBP18.32■□□□□ 0.52
HOXD9-201ENST00000249499 NPPCP23582 126 aa18.31■□□□□ 0.52
HOXD9-201ENST00000249499 GNB1P62873 340 aa18.31■□□□□ 0.52
HOXD9-201ENST00000249499 LDLRAD2Q5SZI1 272 aa18.31■□□□□ 0.52
HOXD9-201ENST00000249499 MINOS1Q5TGZ0 78 aa18.31■□□□□ 0.52
HOXD9-201ENST00000249499 CCDC144NLQ6NUI1 221 aa18.31■□□□□ 0.52
HOXD9-201ENST00000249499 ANAPC16Q96DE5 110 aa18.31■□□□□ 0.52
HOXD9-201ENST00000249499 PFDN5Q99471 154 aa18.31■□□□□ 0.52
HOXD9-201ENST00000249499 MINOS1-NBL1R4GNA1 71 aa18.31■□□□□ 0.52
HOXD9-201ENST00000249499 PSMB11A5LHX3 300 aa18.31■□□□□ 0.52
HOXD9-201ENST00000249499 OVOL3O00110 214 aa18.31■□□□□ 0.52
HOXD9-201ENST00000249499 MIR17HGQ75NE6 70 aa18.31■□□□□ 0.52
HOXD9-201ENST00000249499 NPBQ8NG41 125 aa18.31■□□□□ 0.52
HOXD9-201ENST00000249499 OR1L4Q8NGR5 311 aa18.31■□□□□ 0.52
HOXD9-201ENST00000249499 C22orf15Q8WYQ4 148 aa18.31■□□□□ 0.52
HOXD9-201ENST00000249499 TEX22C9J3V5 150 aa18.3■□□□□ 0.52
HOXD9-201ENST00000249499 TGOLN2O43493 480 aa18.3■□□□□ 0.52
HOXD9-201ENST00000249499 S100A6P06703 90 aa18.3■□□□□ 0.52
HOXD9-201ENST00000249499 NPIPB3Q92617 1050 aa18.3■□□□□ 0.52
HOXD9-201ENST00000249499 FBXL15Q9H469 300 aa18.3■□□□□ 0.52
HOXD9-201ENST00000249499 F11RQ9Y624 299 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms