RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 UNKLQ9H9P5 680 aaKnown RBP18.67■□□□□ 0.58
SYNGR3-201ENST00000248121 HILPDAQ9Y5L2 63 aa18.67■□□□□ 0.58
SYNGR3-201ENST00000248121 VENTXO95231 258 aa18.67■□□□□ 0.58
SYNGR3-201ENST00000248121 B2MP61769 119 aa18.67■□□□□ 0.58
SYNGR3-201ENST00000248121 MMD2Q8IY49 270 aa18.67■□□□□ 0.58
SYNGR3-201ENST00000248121 STPG3Q8N7X2 389 aa18.67■□□□□ 0.58
SYNGR3-201ENST00000248121 GATAD1Q8WUU5 269 aa18.67■□□□□ 0.58
SYNGR3-201ENST00000248121 VAX2Q9UIW0 290 aa18.67■□□□□ 0.58
SYNGR3-201ENST00000248121 IGLC7A0M8Q6 106 aa18.66■□□□□ 0.58
SYNGR3-201ENST00000248121 C7orf77A4D0Y5 90 aa18.66■□□□□ 0.58
SYNGR3-201ENST00000248121 FOXH1O75593 365 aa18.66■□□□□ 0.58
SYNGR3-201ENST00000248121 SSBP2P81877 361 aaPredicted RBP18.66■□□□□ 0.58
SYNGR3-201ENST00000248121 PRR20EP86478 221 aa18.66■□□□□ 0.58
SYNGR3-201ENST00000248121 PRR20CP86479 221 aa18.66■□□□□ 0.58
SYNGR3-201ENST00000248121 PRR20DP86480 221 aa18.66■□□□□ 0.58
SYNGR3-201ENST00000248121 PRR20BP86481 221 aa18.66■□□□□ 0.58
SYNGR3-201ENST00000248121 PRR20AP86496 221 aa18.66■□□□□ 0.58
SYNGR3-201ENST00000248121 FAM90A2PQ658T7 463 aa18.66■□□□□ 0.58
SYNGR3-201ENST00000248121 METTL1Q9UBP6 276 aaKnown RBP18.66■□□□□ 0.58
SYNGR3-201ENST00000248121 PUS1Q9Y606 427 aaKnown RBP eCLIP18.66■□□□□ 0.58
SYNGR3-201ENST00000248121 SNRNP70P08621 437 aaKnown RBP18.65■□□□□ 0.58
SYNGR3-201ENST00000248121 RPL29P47914 159 aaKnown RBP18.65■□□□□ 0.58
SYNGR3-201ENST00000248121 FBXL15Q9H469 300 aa18.65■□□□□ 0.58
SYNGR3-201ENST00000248121 M0R036 132 aa18.65■□□□□ 0.58
SYNGR3-201ENST00000248121 TOX4O94842 621 aa18.65■□□□□ 0.58
SYNGR3-201ENST00000248121 REG1AP05451 166 aa18.65■□□□□ 0.58
SYNGR3-201ENST00000248121 LINC00869P0C866 280 aa18.65■□□□□ 0.58
SYNGR3-201ENST00000248121 HABP2Q14520 560 aaPredicted RBP18.65■□□□□ 0.58
SYNGR3-201ENST00000248121 TNXAQ16473 311 aa18.65■□□□□ 0.58
SYNGR3-201ENST00000248121 FBLN7Q53RD9 439 aa18.65■□□□□ 0.58
SYNGR3-201ENST00000248121 PPP1R27Q86WC6 154 aa18.65■□□□□ 0.58
SYNGR3-201ENST00000248121 FNDC4Q9H6D8 234 aaPredicted RBP18.65■□□□□ 0.58
SYNGR3-201ENST00000248121 NAV2Q8IVL1 2488 aa18.64■□□□□ 0.58
SYNGR3-201ENST00000248121 A0A096LNT2 108 aa18.64■□□□□ 0.57
SYNGR3-201ENST00000248121 H3BQ15 152 aa18.64■□□□□ 0.57
SYNGR3-201ENST00000248121 CD81P60033 236 aa18.64■□□□□ 0.57
SYNGR3-201ENST00000248121 RNF5Q99942 180 aa18.64■□□□□ 0.57
SYNGR3-201ENST00000248121 RPS10P5Q9NQ39 176 aa18.64■□□□□ 0.57
SYNGR3-201ENST00000248121 SLC45A2Q9UMX9 530 aa18.64■□□□□ 0.57
SYNGR3-201ENST00000248121 IFNA1P01562 189 aa18.64■□□□□ 0.57
SYNGR3-201ENST00000248121 COMPP49747 757 aaPredicted RBP18.64■□□□□ 0.57
SYNGR3-201ENST00000248121 DEFB113Q30KQ7 82 aa18.64■□□□□ 0.57
SYNGR3-201ENST00000248121 RBMS3Q6XE24 437 aaKnown RBP18.64■□□□□ 0.57
SYNGR3-201ENST00000248121 SLC16A13Q7RTY0 426 aa18.64■□□□□ 0.57
SYNGR3-201ENST00000248121 DYNAPQ8N1N2 210 aa18.64■□□□□ 0.57
SYNGR3-201ENST00000248121 MAPK1IP1LQ8NDC0 245 aa18.64■□□□□ 0.57
SYNGR3-201ENST00000248121 KCNIP2Q9NS61 270 aa18.64■□□□□ 0.57
SYNGR3-201ENST00000248121 POLR3KQ9Y2Y1 108 aaPredicted RBP18.64■□□□□ 0.57
SYNGR3-201ENST00000248121 CR1P17927 2039 aa18.63■□□□□ 0.57
SYNGR3-201ENST00000248121 FCN1O00602 326 aa18.63■□□□□ 0.57
SYNGR3-201ENST00000248121 AREGP15514 252 aa18.63■□□□□ 0.57
SYNGR3-201ENST00000248121 RPL27AP46776 148 aaKnown RBP18.63■□□□□ 0.57
SYNGR3-201ENST00000248121 OR2T6Q8NHC8 308 aa18.63■□□□□ 0.57
SYNGR3-201ENST00000248121 CACNG8Q8WXS5 425 aa18.63■□□□□ 0.57
SYNGR3-201ENST00000248121 A0A1W2PPV4 95 aa18.62■□□□□ 0.57
SYNGR3-201ENST00000248121 GPX4P36969 197 aaPredicted RBP18.62■□□□□ 0.57
SYNGR3-201ENST00000248121 CEACAM3P40198 252 aa18.62■□□□□ 0.57
SYNGR3-201ENST00000248121 RAB31Q13636 194 aa18.62■□□□□ 0.57
SYNGR3-201ENST00000248121 TMEM249Q2WGJ8 235 aa18.62■□□□□ 0.57
SYNGR3-201ENST00000248121 SLC35E3Q7Z769 313 aa18.62■□□□□ 0.57
SYNGR3-201ENST00000248121 ABHD5Q8WTS1 349 aa18.62■□□□□ 0.57
SYNGR3-201ENST00000248121 CD24P25063 80 aa18.62■□□□□ 0.57
SYNGR3-201ENST00000248121 MAS1LP35410 378 aa18.62■□□□□ 0.57
SYNGR3-201ENST00000248121 MFAP2P55001 183 aa18.62■□□□□ 0.57
SYNGR3-201ENST00000248121 MEF2BQ02080 365 aaPredicted RBP18.62■□□□□ 0.57
SYNGR3-201ENST00000248121 C19orf35Q6ZS72 473 aa18.62■□□□□ 0.57
SYNGR3-201ENST00000248121 RNASEH2CQ8TDP1 164 aaKnown RBP18.62■□□□□ 0.57
SYNGR3-201ENST00000248121 SEPSECSQ9HD40 501 aaKnown RBP18.62■□□□□ 0.57
SYNGR3-201ENST00000248121 ACTL6BO94805 426 aa18.61■□□□□ 0.57
SYNGR3-201ENST00000248121 OR10J1P30954 320 aa18.61■□□□□ 0.57
SYNGR3-201ENST00000248121 GNB1P62873 340 aa18.61■□□□□ 0.57
SYNGR3-201ENST00000248121 SPATA31B1PQ5VZV4 182 aa18.61■□□□□ 0.57
SYNGR3-201ENST00000248121 PVRIGQ6DKI7 326 aa18.61■□□□□ 0.57
SYNGR3-201ENST00000248121 IQCF2Q8IXL9 164 aa18.61■□□□□ 0.57
SYNGR3-201ENST00000248121 TEX22C9J3V5 150 aa18.61■□□□□ 0.57
SYNGR3-201ENST00000248121 STAG3L2P0CL84 134 aa18.61■□□□□ 0.57
SYNGR3-201ENST00000248121 STAG3L3P0CL85 134 aa18.61■□□□□ 0.57
SYNGR3-201ENST00000248121 APELAP0DMC3 54 aa18.61■□□□□ 0.57
SYNGR3-201ENST00000248121 GATA2P23769 480 aaPredicted RBP18.61■□□□□ 0.57
SYNGR3-201ENST00000248121 MANBALQ9NQG1 85 aa18.61■□□□□ 0.57
SYNGR3-201ENST00000248121 MRPL36Q9P0J6 103 aaKnown RBP18.61■□□□□ 0.57
SYNGR3-201ENST00000248121 PSMB3P49720 205 aa18.6■□□□□ 0.57
SYNGR3-201ENST00000248121 SUB1P53999 127 aaKnown RBP eCLIP18.6■□□□□ 0.57
SYNGR3-201ENST00000248121 RHEBQ15382 184 aa18.6■□□□□ 0.57
SYNGR3-201ENST00000248121 SSX2Q16385 188 aa18.6■□□□□ 0.57
SYNGR3-201ENST00000248121 ZNF469Q96JG9 3925 aaPredicted RBP18.6■□□□□ 0.57
SYNGR3-201ENST00000248121 PAGE4O60829 102 aa18.59■□□□□ 0.57
SYNGR3-201ENST00000248121 IGHV3-48P01763 117 aa18.59■□□□□ 0.57
SYNGR3-201ENST00000248121 DSCR9P59020 149 aa18.59■□□□□ 0.57
SYNGR3-201ENST00000248121 ZNF114Q8NC26 417 aa18.59■□□□□ 0.57
SYNGR3-201ENST00000248121 SMCO4Q9NRQ5 59 aa18.59■□□□□ 0.57
SYNGR3-201ENST00000248121 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.59■□□□□ 0.57
SYNGR3-201ENST00000248121 ARL14EPLP0DKL9 152 aa18.59■□□□□ 0.57
SYNGR3-201ENST00000248121 PAX8Q06710 450 aa18.59■□□□□ 0.57
SYNGR3-201ENST00000248121 MMDQ15546 238 aa18.59■□□□□ 0.57
SYNGR3-201ENST00000248121 RUSC1-AS1Q66K80 236 aa18.59■□□□□ 0.57
SYNGR3-201ENST00000248121 KRTAP1-3Q8IUG1 177 aa18.59■□□□□ 0.57
SYNGR3-201ENST00000248121 ACY3Q96HD9 319 aa18.59■□□□□ 0.57
SYNGR3-201ENST00000248121 BEX4Q9NWD9 120 aaPredicted RBP18.59■□□□□ 0.57
SYNGR3-201ENST00000248121 ZANQ9Y493 2812 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms