RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 MED13Q9UHV7 2174 aa11.58□□□□□ -0.56
SF1-201ENST00000227503 GGTLC3B5MD39 225 aa11.58□□□□□ -0.56
SF1-201ENST00000227503 OR7C2O60412 319 aa11.58□□□□□ -0.56
SF1-201ENST00000227503 SMPD2O60906 423 aa11.58□□□□□ -0.56
SF1-201ENST00000227503 IGLV2-8P01709 118 aa11.58□□□□□ -0.56
SF1-201ENST00000227503 RHOBP62745 196 aa11.58□□□□□ -0.56
SF1-201ENST00000227503 TBC1D28Q2M2D7 210 aa11.58□□□□□ -0.56
SF1-201ENST00000227503 HES3Q5TGS1 186 aa11.58□□□□□ -0.56
SF1-201ENST00000227503 POLDIP2Q9Y2S7 368 aa11.58□□□□□ -0.56
SF1-201ENST00000227503 EIF4EBP1Q13541 118 aaPredicted RBP11.57□□□□□ -0.56
SF1-201ENST00000227503 C1orf185Q5T7R7 199 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 PNKDQ8N490 385 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 DEFB127Q9H1M4 99 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 SPRR3Q9UBC9 169 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 KLF13Q9Y2Y9 288 aaPredicted RBP11.57□□□□□ -0.56
SF1-201ENST00000227503 TBR1Q16650 682 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 FAM214BQ7L5A3 538 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 NINJ1Q92982 152 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 C11orf52Q96A22 123 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 URB1-AS1Q96HZ7 61 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 KCNIP1Q9NZI2 227 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 IL19Q9UHD0 177 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 SMG1Q96Q15 3661 aaKnown RBP11.57□□□□□ -0.56
SF1-201ENST00000227503 TANC2Q9HCD6 1990 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 KLRC4-KLRK1H3BQV0 150 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 J3QW42 95 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 UQCRFS1P47985 274 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 GABRA6Q16445 453 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 TMEM249Q2WGJ8 235 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 ZNF766Q5HY98 468 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 S100A7AQ86SG5 101 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 METRNQ9UJH8 293 aa11.57□□□□□ -0.56
SF1-201ENST00000227503 ABCA1O95477 2261 aa11.56□□□□□ -0.56
SF1-201ENST00000227503 LINC00869P0C866 280 aa11.56□□□□□ -0.56
SF1-201ENST00000227503 ZNF138P52744 262 aa11.56□□□□□ -0.56
SF1-201ENST00000227503 RNFT1Q5M7Z0 435 aa11.56□□□□□ -0.56
SF1-201ENST00000227503 TRAT1Q6PIZ9 186 aa11.56□□□□□ -0.56
SF1-201ENST00000227503 OR4A16Q8NH70 328 aa11.56□□□□□ -0.56
SF1-201ENST00000227503 GFRA3O60609 400 aa11.56□□□□□ -0.56
SF1-201ENST00000227503 PPOXP50336 477 aa11.56□□□□□ -0.56
SF1-201ENST00000227503 ZNF503Q96F45 646 aa11.56□□□□□ -0.56
SF1-201ENST00000227503 ARRDC1-AS1Q9H2J1 176 aa11.56□□□□□ -0.56
SF1-201ENST00000227503 EP300Q09472 2414 aaPredicted RBP11.56□□□□□ -0.56
SF1-201ENST00000227503 PRSS46E5RG02 174 aa11.55□□□□□ -0.56
SF1-201ENST00000227503 FOXF2Q12947 444 aa11.55□□□□□ -0.56
SF1-201ENST00000227503 TMEM164Q5U3C3 297 aa11.55□□□□□ -0.56
SF1-201ENST00000227503 TXNDC17Q9BRA2 123 aa11.55□□□□□ -0.56
SF1-201ENST00000227503 FNDC4Q9H6D8 234 aaPredicted RBP11.55□□□□□ -0.56
SF1-201ENST00000227503 SMIM27A0A1W2PRY6 76 aa11.55□□□□□ -0.56
SF1-201ENST00000227503 M0R1X1 148 aa11.55□□□□□ -0.56
SF1-201ENST00000227503 PROP1O75360 226 aa11.55□□□□□ -0.56
SF1-201ENST00000227503 HAND1O96004 215 aa11.55□□□□□ -0.56
SF1-201ENST00000227503 RPL39P5Q59GN2 51 aa11.55□□□□□ -0.56
SF1-201ENST00000227503 DEFB125Q8N687 156 aa11.55□□□□□ -0.56
SF1-201ENST00000227503 SLC25A40Q8TBP6 338 aa11.55□□□□□ -0.56
SF1-201ENST00000227503 CORO2AQ92828 525 aa11.55□□□□□ -0.56
SF1-201ENST00000227503 CHODLQ9H9P2 273 aa11.55□□□□□ -0.56
SF1-201ENST00000227503 PLEKHA3Q9HB20 300 aa11.55□□□□□ -0.56
SF1-201ENST00000227503 PPIAL4DF5H284 164 aa11.54□□□□□ -0.56
SF1-201ENST00000227503 MLANAQ16655 118 aa11.54□□□□□ -0.56
SF1-201ENST00000227503 UTF1Q5T230 341 aa11.54□□□□□ -0.56
SF1-201ENST00000227503 SSX8Q7RTT4 187 aa11.54□□□□□ -0.56
SF1-201ENST00000227503 GUCD1Q96NT3 240 aa11.54□□□□□ -0.56
SF1-201ENST00000227503 TMEM70Q9BUB7 260 aa11.54□□□□□ -0.56
SF1-201ENST00000227503 OSTCQ9NRP0 149 aa11.54□□□□□ -0.56
SF1-201ENST00000227503 TRAV5A0A0B4J249 113 aa11.54□□□□□ -0.56
SF1-201ENST00000227503 IZUMO1RA6ND01 250 aa11.54□□□□□ -0.56
SF1-201ENST00000227503 IQCF6A8MYZ5 107 aa11.54□□□□□ -0.56
SF1-201ENST00000227503 VWC2LB2RUY7 222 aa11.54□□□□□ -0.56
SF1-201ENST00000227503 REG1AP05451 166 aa11.54□□□□□ -0.56
SF1-201ENST00000227503 EDDM3AQ14507 147 aa11.54□□□□□ -0.56
SF1-201ENST00000227503 ZBTB34Q8NCN2 500 aa11.54□□□□□ -0.56
SF1-201ENST00000227503 NUP35Q8NFH5 326 aa11.54□□□□□ -0.56
SF1-201ENST00000227503 OR13A1Q8NGR1 328 aa11.54□□□□□ -0.56
SF1-201ENST00000227503 MRPL27Q9P0M9 148 aaKnown RBP11.54□□□□□ -0.56
SF1-201ENST00000227503 PLXNB1O43157 2135 aa11.54□□□□□ -0.56
SF1-201ENST00000227503 NAV3Q8IVL0 2385 aa11.54□□□□□ -0.56
SF1-201ENST00000227503 TRGV5A0A0B4J1U4 118 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 TMEM30CPA0ZSE6 113 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 IGHV1-2P23083 117 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 MRPL49Q13405 166 aaKnown RBP11.53□□□□□ -0.56
SF1-201ENST00000227503 FAM120AOSQ5T036 256 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 MORN5Q5VZ52 161 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 COQ2Q96H96 371 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 TAAR6Q96RI8 345 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 LSM4Q9Y4Z0 139 aaKnown RBP11.53□□□□□ -0.56
SF1-201ENST00000227503 BOD1L1Q8NFC6 3051 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 K7ERU9 68 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 VDAC2P45880 294 aaPredicted RBP11.53□□□□□ -0.56
SF1-201ENST00000227503 TEPPQ6URK8 271 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 LHFPL4Q7Z7J7 247 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 C11orf53Q8IXP5 236 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 NPVFQ9HCQ7 196 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 DMXL1Q9Y485 3027 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 MPDU1O75352 247 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 MT-CO2P00403 227 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 PRB4P10163 310 aaPredicted RBP11.53□□□□□ -0.56
SF1-201ENST00000227503 CD46P15529 392 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 MPV17P39210 176 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 SLC25A34Q6PIV7 304 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms