RNA–Protein interactions for RNA: ENST00000218200.12

FMR1-201, Transcript of fragile X mental retardation 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FMR1, Length 4,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-201ENST00000218200 ALPK3Q96L96 1907 aa17.4■□□□□ 0.38
FMR1-201ENST00000218200 TRAV8-6A0A0B4J262 113 aa17.39■□□□□ 0.37
FMR1-201ENST00000218200 LCN12Q6JVE5 192 aa17.39■□□□□ 0.37
FMR1-201ENST00000218200 TNCP24821 2201 aa17.39■□□□□ 0.37
FMR1-201ENST00000218200 CCL1P22362 96 aa17.39■□□□□ 0.37
FMR1-201ENST00000218200 SFTA2Q6UW10 78 aa17.39■□□□□ 0.37
FMR1-201ENST00000218200 Q6ZRM9 215 aa17.39■□□□□ 0.37
FMR1-201ENST00000218200 OR5R1Q8NH85 324 aa17.39■□□□□ 0.37
FMR1-201ENST00000218200 NAA38Q9BRA0 125 aaKnown RBP17.39■□□□□ 0.37
FMR1-201ENST00000218200 IDI2-AS1Q9NZ38 188 aa17.39■□□□□ 0.37
FMR1-201ENST00000218200 PLXNB1O43157 2135 aa17.39■□□□□ 0.37
FMR1-201ENST00000218200 LILRA1O75019 489 aa17.39■□□□□ 0.37
FMR1-201ENST00000218200 IGHV3-23P01764 117 aa17.39■□□□□ 0.37
FMR1-201ENST00000218200 PRDM13Q9H4Q3 707 aa17.39■□□□□ 0.37
FMR1-201ENST00000218200 COX5BP10606 129 aa17.38■□□□□ 0.37
FMR1-201ENST00000218200 CLDN18P56856 261 aa17.38■□□□□ 0.37
FMR1-201ENST00000218200 ZNF324BQ6AW86 544 aaPredicted RBP17.38■□□□□ 0.37
FMR1-201ENST00000218200 FDCSPQ8NFU4 85 aa17.38■□□□□ 0.37
FMR1-201ENST00000218200 IGKV3D-15A0A087WSY6 115 aa17.38■□□□□ 0.37
FMR1-201ENST00000218200 PINLYPA6NC86 204 aa17.38■□□□□ 0.37
FMR1-201ENST00000218200 HIGD1CA8MV81 97 aa17.38■□□□□ 0.37
FMR1-201ENST00000218200 IGKV3-15P01624 115 aa17.38■□□□□ 0.37
FMR1-201ENST00000218200 FAM27E3Q08E93 113 aa17.38■□□□□ 0.37
FMR1-201ENST00000218200 OR4A5Q8NH83 315 aa17.38■□□□□ 0.37
FMR1-201ENST00000218200 CCL3L1P16619 93 aa17.38■□□□□ 0.37
FMR1-201ENST00000218200 MPZP25189 248 aa17.38■□□□□ 0.37
FMR1-201ENST00000218200 QRFPP83859 136 aa17.38■□□□□ 0.37
FMR1-201ENST00000218200 OR9G1Q8NH87 305 aa17.38■□□□□ 0.37
FMR1-201ENST00000218200 PTPRSQ13332 1948 aa17.38■□□□□ 0.37
FMR1-201ENST00000218200 DGAT2L7PQ6IED9 249 aa17.38■□□□□ 0.37
FMR1-201ENST00000218200 TMEM208Q9BTX3 173 aa17.38■□□□□ 0.37
FMR1-201ENST00000218200 IL4P05112 153 aa17.37■□□□□ 0.37
FMR1-201ENST00000218200 DPF1Q92782 380 aa17.37■□□□□ 0.37
FMR1-201ENST00000218200 PRR33A8MZF0 331 aa17.37■□□□□ 0.37
FMR1-201ENST00000218200 CSRP2Q16527 193 aa17.37■□□□□ 0.37
FMR1-201ENST00000218200 IGHV3-66A0A0C4DH42 116 aa17.37■□□□□ 0.37
FMR1-201ENST00000218200 FABP2P12104 132 aa17.37■□□□□ 0.37
FMR1-201ENST00000218200 MIEN1Q9BRT3 115 aa17.37■□□□□ 0.37
FMR1-201ENST00000218200 ZFP36L1Q07352 338 aaKnown RBP17.36■□□□□ 0.37
FMR1-201ENST00000218200 SPATA31B1PQ5VZV4 182 aa17.36■□□□□ 0.37
FMR1-201ENST00000218200 GCSAMQ8N6F7 178 aa17.36■□□□□ 0.37
FMR1-201ENST00000218200 PSPNO60542 156 aa17.36■□□□□ 0.37
FMR1-201ENST00000218200 IGKV1-5P01602 117 aa17.36■□□□□ 0.37
FMR1-201ENST00000218200 TMEM136Q6ZRR5 245 aa17.36■□□□□ 0.37
FMR1-201ENST00000218200 ZNF664Q8N3J9 261 aa17.36■□□□□ 0.37
FMR1-201ENST00000218200 LNP1A1A4G5 178 aa17.36■□□□□ 0.37
FMR1-201ENST00000218200 M0R3E3 92 aa17.36■□□□□ 0.37
FMR1-201ENST00000218200 RNFT1Q5M7Z0 435 aa17.36■□□□□ 0.37
FMR1-201ENST00000218200 GTF3AQ92664 365 aaKnown RBP17.36■□□□□ 0.37
FMR1-201ENST00000218200 TIMP3P35625 211 aa17.35■□□□□ 0.37
FMR1-201ENST00000218200 HBBP68871 147 aa17.35■□□□□ 0.37
FMR1-201ENST00000218200 OR4C13Q8NGP0 309 aa17.35■□□□□ 0.37
FMR1-201ENST00000218200 NABP1Q96AH0 204 aa17.35■□□□□ 0.37
FMR1-201ENST00000218200 TRBV24-1A0A075B6N3 115 aa17.35■□□□□ 0.37
FMR1-201ENST00000218200 F2RL2O00254 374 aa17.35■□□□□ 0.37
FMR1-201ENST00000218200 OR9G9P0C7N8 305 aa17.35■□□□□ 0.37
FMR1-201ENST00000218200 CD24P25063 80 aa17.35■□□□□ 0.37
FMR1-201ENST00000218200 OR10AG1Q8NH19 301 aa17.35■□□□□ 0.37
FMR1-201ENST00000218200 FBXL15Q9H469 300 aa17.35■□□□□ 0.37
FMR1-201ENST00000218200 CA7P43166 264 aa17.35■□□□□ 0.37
FMR1-201ENST00000218200 CRYGSP22914 178 aa17.35■□□□□ 0.37
FMR1-201ENST00000218200 TBR1Q16650 682 aa17.35■□□□□ 0.37
FMR1-201ENST00000218200 C10orf55Q5SWW7 151 aa17.35■□□□□ 0.37
FMR1-201ENST00000218200 MCRIP2Q9BUT9 160 aaKnown RBP17.35■□□□□ 0.37
FMR1-201ENST00000218200 RAB1BQ9H0U4 201 aa17.35■□□□□ 0.37
FMR1-201ENST00000218200 PIEZO2Q9H5I5 2752 aa17.35■□□□□ 0.37
FMR1-201ENST00000218200 BPTFQ12830 3046 aa17.34■□□□□ 0.37
FMR1-201ENST00000218200 DNLZQ5SXM8 178 aa17.34■□□□□ 0.37
FMR1-201ENST00000218200 TEX38Q6PEX7 206 aa17.34■□□□□ 0.37
FMR1-201ENST00000218200 TRAV5A0A0B4J249 113 aa17.34■□□□□ 0.37
FMR1-201ENST00000218200 APOHP02749 345 aaPredicted RBP17.34■□□□□ 0.37
FMR1-201ENST00000218200 OR1N2Q8NGR9 330 aa17.34■□□□□ 0.37
FMR1-201ENST00000218200 IFI27L2Q9H2X8 130 aa17.34■□□□□ 0.37
FMR1-201ENST00000218200 MYOD1P15172 320 aa17.34■□□□□ 0.37
FMR1-201ENST00000218200 DLX1P56177 255 aa17.34■□□□□ 0.37
FMR1-201ENST00000218200 PNRC2Q9NPJ4 139 aaKnown RBP17.34■□□□□ 0.37
FMR1-201ENST00000218200 PCDH15Q96QU1 1955 aa17.34■□□□□ 0.37
FMR1-201ENST00000218200 NTN3O00634 580 aaPredicted RBP17.33■□□□□ 0.37
FMR1-201ENST00000218200 PRSS2P07478 247 aa17.33■□□□□ 0.37
FMR1-201ENST00000218200 NMSQ5H8A3 153 aa17.33■□□□□ 0.37
FMR1-201ENST00000218200 HIST1H4GQ99525 98 aa17.33■□□□□ 0.37
FMR1-201ENST00000218200 UNQ5815/PRO19632Q6UWF5 114 aa17.33■□□□□ 0.36
FMR1-201ENST00000218200 Q6ZT83 130 aa17.33■□□□□ 0.36
FMR1-201ENST00000218200 LRTM2Q8N967 370 aa17.33■□□□□ 0.36
FMR1-201ENST00000218200 CUL9Q8IWT3 2517 aa17.33■□□□□ 0.36
FMR1-201ENST00000218200 PEX7O00628 323 aa17.33■□□□□ 0.36
FMR1-201ENST00000218200 TMEM50AO95807 157 aa17.33■□□□□ 0.36
FMR1-201ENST00000218200 OR10W1Q8NGF6 305 aa17.33■□□□□ 0.36
FMR1-201ENST00000218200 COL25A1Q9BXS0 654 aaPredicted RBP17.33■□□□□ 0.36
FMR1-201ENST00000218200 LIME1Q9H400 295 aa17.33■□□□□ 0.36
FMR1-201ENST00000218200 TMEM160Q9NX00 188 aa17.33■□□□□ 0.36
FMR1-201ENST00000218200 RALYQ9UKM9 306 aaKnown RBP17.33■□□□□ 0.36
FMR1-201ENST00000218200 M0QZ24 198 aa17.32■□□□□ 0.36
FMR1-201ENST00000218200 IGHV1-2P23083 117 aa17.32■□□□□ 0.36
FMR1-201ENST00000218200 CTSSP25774 331 aa17.32■□□□□ 0.36
FMR1-201ENST00000218200 HOXB1P14653 301 aaPredicted RBP17.32■□□□□ 0.36
FMR1-201ENST00000218200 MC5RP33032 325 aa17.32■□□□□ 0.36
FMR1-201ENST00000218200 SEPSECSQ9HD40 501 aaKnown RBP17.32■□□□□ 0.36
FMR1-201ENST00000218200 FOXI3A8MTJ6 420 aaPredicted RBP17.32■□□□□ 0.36
FMR1-201ENST00000218200 ZNF146Q15072 292 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms