RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ITPR3Q14573 2671 aa15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 INS-IGF2F8WCM5 200 aa15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 RAB2AP61019 212 aa15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 RHEBQ15382 184 aa15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 MMDQ15546 238 aa15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 DEFB113Q30KQ7 82 aa15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 LCN15Q6UWW0 184 aa15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 CYB561D1Q8N8Q1 229 aa15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 MALSU1Q96EH3 234 aa15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 EAF1Q96JC9 268 aaPredicted RBP15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 C12orf57Q99622 126 aa15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 BEX4Q9NWD9 120 aaPredicted RBP15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 LOC102723971A0A1B0GUV8 181 aa15.73■□□□□ 0.11
TNFRSF1A-201ENST00000162749 WT1-ASQ06250 92 aa15.73■□□□□ 0.11
TNFRSF1A-201ENST00000162749 KHDC3LQ587J8 217 aa15.73■□□□□ 0.11
TNFRSF1A-201ENST00000162749 HIST2H2BCQ6DN03 193 aa15.73■□□□□ 0.11
TNFRSF1A-201ENST00000162749 CENPVQ7Z7K6 275 aaPredicted RBP15.73■□□□□ 0.11
TNFRSF1A-201ENST00000162749 B4DSR2 109 aa15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 FOLR2P14207 255 aa15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 MDKP21741 143 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 FGF8P55075 233 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 HES1Q14469 280 aa15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 TNXAQ16473 311 aa15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 TMEM41BQ5BJD5 291 aa15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 GNG13Q9P2W3 67 aa15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 A0A1W2PN81 502 aa15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 H3BQ15 152 aa15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 NPFFO15130 113 aa15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 ACTL6BO94805 426 aa15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 RNASE2P10153 161 aaKnown RBP15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 CHRNA7P36544 502 aa15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 CEBPGP53567 150 aa15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 ELLP55199 621 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 SSBP2P81877 361 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 GGACTQ9BVM4 153 aa15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 TIMM9Q9Y5J7 89 aa15.72■□□□□ 0.11
TNFRSF1A-201ENST00000162749 NBR2O15453 112 aa15.71■□□□□ 0.11
TNFRSF1A-201ENST00000162749 EIF3GO75821 320 aaKnown RBP eCLIP15.71■□□□□ 0.11
TNFRSF1A-201ENST00000162749 COMPP49747 757 aaPredicted RBP15.71■□□□□ 0.11
TNFRSF1A-201ENST00000162749 S100A12P80511 92 aa15.71■□□□□ 0.11
TNFRSF1A-201ENST00000162749 C2orf83Q53S99 150 aa15.71■□□□□ 0.11
TNFRSF1A-201ENST00000162749 ZFP82Q8N141 532 aa15.71■□□□□ 0.11
TNFRSF1A-201ENST00000162749 LRRC75A-AS1Q8N1F1 130 aa15.71■□□□□ 0.11
TNFRSF1A-201ENST00000162749 NPBQ8NG41 125 aa15.71■□□□□ 0.11
TNFRSF1A-201ENST00000162749 OR2T10Q8NGZ9 312 aa15.71■□□□□ 0.11
TNFRSF1A-201ENST00000162749 NDUFA3O95167 84 aa15.71■□□□□ 0.1
TNFRSF1A-201ENST00000162749 MAS1LP35410 378 aa15.71■□□□□ 0.1
TNFRSF1A-201ENST00000162749 ERHP84090 104 aaKnown RBP15.71■□□□□ 0.1
TNFRSF1A-201ENST00000162749 ACSM6Q6P461 480 aa15.71■□□□□ 0.1
TNFRSF1A-201ENST00000162749 RPP25LQ8N5L8 163 aaKnown RBP15.71■□□□□ 0.1
TNFRSF1A-201ENST00000162749 PDZD2O15018 2839 aa15.7■□□□□ 0.1
TNFRSF1A-201ENST00000162749 TRAV40A0A0B4J280 105 aa15.7■□□□□ 0.1
TNFRSF1A-201ENST00000162749 FCN1O00602 326 aa15.7■□□□□ 0.1
TNFRSF1A-201ENST00000162749 FGF7P21781 194 aa15.7■□□□□ 0.1
TNFRSF1A-201ENST00000162749 ATP5IP56385 69 aaPredicted RBP15.7■□□□□ 0.1
TNFRSF1A-201ENST00000162749 DLK1P80370 383 aa15.7■□□□□ 0.1
TNFRSF1A-201ENST00000162749 EBI3Q14213 229 aa15.7■□□□□ 0.1
TNFRSF1A-201ENST00000162749 PLGLAQ15195 96 aa15.7■□□□□ 0.1
TNFRSF1A-201ENST00000162749 C2CD4CQ8TF44 421 aa15.7■□□□□ 0.1
TNFRSF1A-201ENST00000162749 TLN2Q9Y4G6 2542 aa15.7■□□□□ 0.1
TNFRSF1A-201ENST00000162749 IGLC7A0M8Q6 106 aa15.7■□□□□ 0.1
TNFRSF1A-201ENST00000162749 ZFP92A6NM28 416 aa15.7■□□□□ 0.1
TNFRSF1A-201ENST00000162749 MT-ND4LP03901 98 aa15.7■□□□□ 0.1
TNFRSF1A-201ENST00000162749 RPL27AP46776 148 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1A-201ENST00000162749 ARSJQ5FYB0 599 aaPredicted RBP15.7■□□□□ 0.1
TNFRSF1A-201ENST00000162749 NPCDR1Q9BY65 106 aa15.7■□□□□ 0.1
TNFRSF1A-201ENST00000162749 HIF1ANQ9NWT6 349 aa15.7■□□□□ 0.1
TNFRSF1A-201ENST00000162749 WDR83OSQ9Y284 106 aa15.7■□□□□ 0.1
TNFRSF1A-201ENST00000162749 HECTD1Q9ULT8 2610 aa15.69■□□□□ 0.1
TNFRSF1A-201ENST00000162749 BCL2P10415 239 aa15.69■□□□□ 0.1
TNFRSF1A-201ENST00000162749 GNB1P62873 340 aa15.69■□□□□ 0.1
TNFRSF1A-201ENST00000162749 TREML4Q6UXN2 200 aa15.69■□□□□ 0.1
TNFRSF1A-201ENST00000162749 Q8N6K4 173 aa15.69■□□□□ 0.1
TNFRSF1A-201ENST00000162749 C1orf159Q96HA4 380 aa15.69■□□□□ 0.1
TNFRSF1A-201ENST00000162749 C7orf69Q9H7B7 122 aa15.69■□□□□ 0.1
TNFRSF1A-201ENST00000162749 PRRC2AP48634 2157 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1A-201ENST00000162749 SMCO3A2RU48 225 aa15.68■□□□□ 0.1
TNFRSF1A-201ENST00000162749 RNF212Q495C1 297 aa15.68■□□□□ 0.1
TNFRSF1A-201ENST00000162749 Q5PR19 223 aa15.68■□□□□ 0.1
TNFRSF1A-201ENST00000162749 RUSC1-AS1Q66K80 236 aa15.68■□□□□ 0.1
TNFRSF1A-201ENST00000162749 FAM24BQ8N5W8 94 aa15.68■□□□□ 0.1
TNFRSF1A-201ENST00000162749 OR10G4Q8NGN3 311 aa15.68■□□□□ 0.1
TNFRSF1A-201ENST00000162749 IGHV3OR16-10A0A075B7F0 116 aa15.68■□□□□ 0.1
TNFRSF1A-201ENST00000162749 IGHV1-69DA0A0B4J2H0 117 aa15.68■□□□□ 0.1
TNFRSF1A-201ENST00000162749 MAP1LC3B2A6NCE7 125 aa15.68■□□□□ 0.1
TNFRSF1A-201ENST00000162749 IGHV1-69P01742 117 aa15.68■□□□□ 0.1
TNFRSF1A-201ENST00000162749 YPEL4Q96NS1 127 aa15.68■□□□□ 0.1
TNFRSF1A-201ENST00000162749 MAP1LC3BQ9GZQ8 125 aa15.68■□□□□ 0.1
TNFRSF1A-201ENST00000162749 MXRA5Q9NR99 2828 aa15.67■□□□□ 0.1
TNFRSF1A-201ENST00000162749 FAM90A2PQ658T7 463 aa15.67■□□□□ 0.1
TNFRSF1A-201ENST00000162749 BRD3OSQ6XYD6 125 aa15.67■□□□□ 0.1
TNFRSF1A-201ENST00000162749 SRSF12Q8WXF0 261 aaKnown RBP15.67■□□□□ 0.1
TNFRSF1A-201ENST00000162749 FLNAP21333 2647 aaKnown RBP15.67■□□□□ 0.1
TNFRSF1A-201ENST00000162749 REG1AP05451 166 aa15.67■□□□□ 0.1
TNFRSF1A-201ENST00000162749 APELAP0DMC3 54 aa15.67■□□□□ 0.1
TNFRSF1A-201ENST00000162749 IGHV4-38-2P0DP08 117 aa15.67■□□□□ 0.1
TNFRSF1A-201ENST00000162749 C5orf64Q2M2E5 130 aa15.67■□□□□ 0.1
TNFRSF1A-201ENST00000162749 MAPK1IP1LQ8NDC0 245 aa15.67■□□□□ 0.1
TNFRSF1A-201ENST00000162749 P2RX4Q99571 388 aa15.67■□□□□ 0.1
TNFRSF1A-201ENST00000162749 NPVFQ9HCQ7 196 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms