RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Hist2h2bbQ64525 126 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Hist1h2bcQ6ZWY9 126 aaKnown RBP9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Cd200r5Q8BTP3 270 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Nadk2Q8C5H8 452 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Vmn1r220Q8R272 298 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 BmfQ91ZE9 185 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Olfr114Q923Q8 312 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Ints1Q6P4S8 2195 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Olfr893K7N678 312 aa9.27□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Mtatp6P00848 226 aa9.27□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Hbb-bh0P04443 147 aa9.27□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 RorcP51450 516 aa9.27□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 ShbgP97497 403 aa9.27□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Prr27Q3SYJ2 352 aa9.27□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Cln6Q3U466 308 aa9.27□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Fbxo27Q6DIA9 280 aa9.27□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Olfr1181Q7TR18 311 aa9.27□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 EogtQ8BYW9 527 aa9.27□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 TskuQ8CBR6 354 aa9.27□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Olfr113Q8VEU4 312 aa9.27□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Olfr1054Q8VGS7 312 aa9.27□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Mrgpra6Q91ZC6 301 aa9.27□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Loxl4Q924C6 757 aa9.27□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Cldn23Q9D7D7 296 aa9.27□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Rpl23a-ps3A0A140T8M7 156 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Vmn1r180B9EK86 305 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Mas1P30554 324 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Rpl23aP62751 156 aaKnown RBP9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Nr2c2apQ3TV70 140 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Tnfsf15Q5UBV8 252 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Grb2Q60631 217 aaKnown RBP9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 St8sia1Q64687 355 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Olfr923Q7TRB9 317 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Tbl1xr1Q8BHJ5 514 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Gm26558Q8BLW8 286 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 9430097D07RikQ8BS47 195 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 FarsaQ8C0C7 508 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Dmrtc2Q8CGW9 370 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Poc1aQ8JZX3 405 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Defb7Q91V70 71 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Neurl1Q923S6 574 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Wwtr1Q9EPK5 395 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Fbxl17Q9QZN1 701 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Cacna1gQ5SUF7 2381 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Ms4a12A0A087WSB9 263 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Gm438B1ASB3 393 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 A630073D07RikE9PWS6 100 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Gm10665K7N6B7 321 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Smr2O09133 150 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 GzmbP04187 247 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Wipf3P0C7L0 485 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Klk1b5P15945 261 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Nkx2-1P50220 372 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Gsc2P56916 198 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Rab11aP62492 216 aaKnown RBP9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Olfr193Q7TS43 309 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Q8BG31 207 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 9030612E09RikQ8CE20 140 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Ube2v2Q9D2M8 145 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Rspo1Q9Z132 265 aa9.27□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Rsg1A2A825 258 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Vmn1r138D3YTY2 306 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Mn1D3YWE6 1297 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Fam53aE9PV82 402 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Gm8693E9PW18 306 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Zfp760E9QAF5 666 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Gm4498K9J7G4 306 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Vmn1r118L7N273 306 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Zfand5O88878 213 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 SellP18337 372 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Gpr12P35412 334 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Hist1h1bP43276 223 aaKnown RBP9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Fkbp2P45878 140 aaKnown RBP9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Cdkn1bP46414 197 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 CryzP47199 331 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Sys1Q78S06 156 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Olfr1137Q7TR40 310 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Mrps10Q80ZK0 160 aaKnown RBP9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Harbi1Q8BR93 349 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Exosc6Q8BTW3 273 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 RydenQ8CAK3 290 aaKnown RBP9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Olfr994Q8VF73 314 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Q9CRC3 126 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Spata45Q9CVW4 97 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Plekha2Q9ERS5 425 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Ntn3Q9R1A3 580 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Timm9Q9WV98 89 aaKnown RBP9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 BptfA2A654 3036 aaKnown RBP9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Trbv5A0A0B4J1G9 113 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Zfp108E9Q8I5 642 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 D430019H16RikJ3QPM6 83 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Ccr2P51683 373 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Gm5127Q3UQH6 212 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Olfr1111Q7TR55 312 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Vmn1r183Q8K3N5 305 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Vmn1r178Q8R2B6 304 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Mansc1Q9CR33 414 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Pgpep1Q9ESW8 209 aa9.26□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Gm4950D3YUM8 205 aa9.25□□□□□ -0.93
Prpf40b-202ENSMUST00000118287 Olfr204E9Q8M0 305 aa9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 69.1 ms