RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 MMP17Q9ULZ9 603 aa4.89□□□□□ -1.63
CASC19-260ENST00000641828 CACNA1EQ15878 2313 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 PCDH15Q96QU1 1955 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 IGKV1-27A0A075B6S5 117 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 TRAV8-6A0A0B4J262 113 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 MUC21A0A0G2JKD1 596 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 MUC21A0A140T8X8 626 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 C5orf63A6NC05 138 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 SLC17A3O00476 420 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 CRXO43186 299 aaPredicted RBP4.88□□□□□ -1.63
CASC19-260ENST00000641828 TLX3O43711 291 aaPredicted RBP4.88□□□□□ -1.63
CASC19-260ENST00000641828 OR10J4P0C629 311 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 PSG2P11465 335 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 CD1BP29016 333 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 GPR6P46095 362 aaPredicted RBP4.88□□□□□ -1.63
CASC19-260ENST00000641828 FUT6P51993 359 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 RBM11P57052 281 aaKnown RBP4.88□□□□□ -1.63
CASC19-260ENST00000641828 UBE2G1P62253 170 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 TGFBR3Q03167 851 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 PLCXD2Q0VAA5 305 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 Q56UQ5 140 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 MUC21Q5SSG8 566 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 ABHD17BQ5VST6 288 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 LCN12Q6JVE5 192 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 UFSP1Q6NVU6 142 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 PCSK4Q6UW60 755 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 BHLHA15Q7RTS1 189 aaPredicted RBP4.88□□□□□ -1.63
CASC19-260ENST00000641828 NEGR1Q7Z3B1 354 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 ERASQ7Z444 233 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 OR8I2Q8N0Y5 310 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 C5orf17Q8NAS9 161 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 NEUROG1Q92886 237 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 COMMD5Q9GZQ3 224 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 TMEM38BQ9NVV0 291 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 HS3ST3A1Q9Y663 406 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 F5P12259 2224 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 PTPRQQ9UMZ3 2332 aa4.88□□□□□ -1.63
CASC19-260ENST00000641828 SMG1Q96Q15 3661 aaKnown RBP4.87□□□□□ -1.63
CASC19-260ENST00000641828 IGKV1-12A0A0C4DH73 117 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 A0A1W2PPV4 95 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 C2orf70A6NJV1 201 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 A8MZ25 164 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 G3V3Y1 287 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 M0R135 149 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 BMPR1BO00238 502 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 HSBP1O75506 76 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 OR7C1O76099 320 aaPredicted RBP4.87□□□□□ -1.63
CASC19-260ENST00000641828 CGAP01215 116 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 IGKV1D-12P01611 117 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 SCTP09683 121 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 PPIAL4GP0DN37 164 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 NPY1RP25929 384 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 CRYBB3P26998 211 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 SEC11AP67812 179 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 HIST1H1AQ02539 215 aaPredicted RBP4.87□□□□□ -1.63
CASC19-260ENST00000641828 C17orf67Q0P5P2 114 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 VWC2Q2TAL6 325 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 RASL11AQ6T310 242 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 RD3Q7Z3Z2 195 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 ZDHHC23Q8IYP9 409 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 OR1N2Q8NGR9 330 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 SPTSSAQ969W0 71 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 FAM131CQ96AQ9 280 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 MMABQ96EY8 250 aaPredicted RBP4.87□□□□□ -1.63
CASC19-260ENST00000641828 ZNF799Q96GE5 643 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 AP1S3Q96PC3 154 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 ATP6V0BQ99437 205 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 SIGMAR1Q99720 223 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 CHRDL1Q9BU40 450 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 TMEM70Q9BUB7 260 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 LRRC61Q9BV99 259 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 OR2W1Q9Y3N9 320 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 V9GYV3 84 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 LOC400499M0QZD8 3231 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 TRGV10A0A0A0MS01 117 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 ZNF816-ZNF321PA0A0X1KG74 233 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 C7orf71A4D174 169 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 TMEM150CB9EJG8 249 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 K7EN84 100 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 M0R2Z0 102 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 GNG7O60262 68 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 SMPD2O60906 423 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 CLDN1O95832 211 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 MT-CO3P00414 261 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 APCSP02743 223 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 FBXW4P57775 412 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 PSG7Q13046 419 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 IZUMO4Q1ZYL8 232 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 RSPO1Q2MKA7 263 aaPredicted RBP4.87□□□□□ -1.63
CASC19-260ENST00000641828 DEFB110Q30KQ9 67 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 KIAA1644Q3SXP7 199 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 Q5PR19 223 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 FAM162BQ5T6X4 162 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 SERTAD4-AS1Q5TG53 156 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 C9orf135Q5VTT2 229 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 TMEM42Q69YG0 159 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 EBLN2Q6P2I7 272 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 S100A7AQ86SG5 101 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 OR10W1Q8NGF6 305 aa4.87□□□□□ -1.63
CASC19-260ENST00000641828 OR5A2Q8NGI9 324 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms