RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 PPP1R14DQ9NXH3 145 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 OR51B2Q9Y5P1 312 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 HEATR1Q9H583 2144 aaKnown RBP8.94□□□□□ -0.98
SNIP1-204ENST00000638725 BMPR1BO00238 502 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 IGLV2-8P01709 118 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 MGST1P10620 155 aaKnown RBP8.94□□□□□ -0.98
SNIP1-204ENST00000638725 CTRLP40313 264 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 MLANAQ16655 118 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 OR10J3Q5JRS4 329 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 WDR73Q6P4I2 378 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 DUX4L9Q6RFH8 374 aaPredicted RBP8.94□□□□□ -0.98
SNIP1-204ENST00000638725 C1orf174Q8IYL3 243 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 LYG1Q8N1E2 194 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 SERTAD4Q9NUC0 356 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 TECRQ9NZ01 308 aaKnown RBP8.94□□□□□ -0.98
SNIP1-204ENST00000638725 PPIAL4AQ9Y536 164 aa8.94□□□□□ -0.98
SNIP1-204ENST00000638725 TMEM265A0A087WTH1 108 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 CA1P00915 261 aaPredicted RBP8.93□□□□□ -0.98
SNIP1-204ENST00000638725 RAB7AP51149 207 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 IBA57Q5T440 356 aaKnown RBP8.93□□□□□ -0.98
SNIP1-204ENST00000638725 MOGAT3Q86VF5 341 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 FAM19A2Q8N3H0 131 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 NHLRC2Q8NBF2 726 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 CORO2AQ92828 525 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 PLEKHA3Q9HB20 300 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 ARL2-SNX15V9GYD0 113 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 LNP1A1A4G5 178 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 J3QR06 171 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 IGLV1-44P01699 117 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 CGB3P0DN86 165 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 CGB7P0DN87 165 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 GNG10P50151 68 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 MRPS11P82912 194 aaKnown RBP8.93□□□□□ -0.98
SNIP1-204ENST00000638725 RPL19P84098 196 aaKnown RBP8.93□□□□□ -0.98
SNIP1-204ENST00000638725 RELQ04864 619 aaPredicted RBP8.93□□□□□ -0.98
SNIP1-204ENST00000638725 MMDQ15546 238 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 DHRS13Q6UX07 377 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 STARD4Q96DR4 205 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 OR2V2Q96R30 315 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 CDC42EP3Q9UKI2 254 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 TECTAO75443 2155 aa8.93□□□□□ -0.98
SNIP1-204ENST00000638725 ISLRO14498 428 aa8.92□□□□□ -0.98
SNIP1-204ENST00000638725 ZNF324O75467 553 aaPredicted RBP8.92□□□□□ -0.98
SNIP1-204ENST00000638725 AMY1AP04745 511 aa8.92□□□□□ -0.98
SNIP1-204ENST00000638725 OR5G3P0C626 314 aa8.92□□□□□ -0.98
SNIP1-204ENST00000638725 NIT1Q86X76 327 aa8.92□□□□□ -0.98
SNIP1-204ENST00000638725 OR9G1Q8NH87 305 aa8.92□□□□□ -0.98
SNIP1-204ENST00000638725 IGF2BP2-AS1Q96M15 143 aa8.92□□□□□ -0.98
SNIP1-204ENST00000638725 GPR179Q6PRD1 2367 aa8.92□□□□□ -0.98
SNIP1-204ENST00000638725 C3orf79P0CE67 100 aa8.92□□□□□ -0.98
SNIP1-204ENST00000638725 ZNF883P0CG24 379 aa8.92□□□□□ -0.98
SNIP1-204ENST00000638725 C1orf162Q8NEQ5 155 aaPredicted RBP8.92□□□□□ -0.98
SNIP1-204ENST00000638725 SSBP3Q9BWW4 388 aaPredicted RBP8.92□□□□□ -0.98
SNIP1-204ENST00000638725 WNT10AQ9GZT5 417 aa8.92□□□□□ -0.98
SNIP1-204ENST00000638725 TNCP24821 2201 aa8.92□□□□□ -0.98
SNIP1-204ENST00000638725 SMIM27A0A1W2PRY6 76 aa8.91□□□□□ -0.98
SNIP1-204ENST00000638725 FNDC10F2Z333 226 aa8.91□□□□□ -0.98
SNIP1-204ENST00000638725 HLA-DQA1P01909 254 aa8.91□□□□□ -0.98
SNIP1-204ENST00000638725 NTF3P20783 257 aa8.91□□□□□ -0.98
SNIP1-204ENST00000638725 MZT1Q08AG7 82 aa8.91□□□□□ -0.98
SNIP1-204ENST00000638725 COL5A1-AS1Q5SY13 56 aa8.91□□□□□ -0.98
SNIP1-204ENST00000638725 MORN5Q5VZ52 161 aa8.91□□□□□ -0.98
SNIP1-204ENST00000638725 FAM168AQ92567 244 aa8.91□□□□□ -0.98
SNIP1-204ENST00000638725 TUBG2Q9NRH3 451 aa8.91□□□□□ -0.98
SNIP1-204ENST00000638725 ZNRD1Q9P1U0 126 aa8.91□□□□□ -0.98
SNIP1-204ENST00000638725 SRRM4A7MD48 611 aaKnown RBP8.91□□□□□ -0.98
SNIP1-204ENST00000638725 IGHG3P01860 377 aa8.91□□□□□ -0.98
SNIP1-204ENST00000638725 IGKV1-16P04430 117 aa8.91□□□□□ -0.98
SNIP1-204ENST00000638725 PPOXP50336 477 aa8.91□□□□□ -0.98
SNIP1-204ENST00000638725 PRCDQ00LT1 54 aa8.91□□□□□ -0.98
SNIP1-204ENST00000638725 LINC00479Q96M42 142 aa8.91□□□□□ -0.98
SNIP1-204ENST00000638725 PRNDQ9UKY0 176 aa8.91□□□□□ -0.98
SNIP1-204ENST00000638725 DSCAMO60469 2012 aa8.91□□□□□ -0.98
SNIP1-204ENST00000638725 PRRC2CQ9Y520 2896 aaKnown RBP8.91□□□□□ -0.98
SNIP1-204ENST00000638725 TRAV5A0A0B4J249 113 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 KBTBD11-OT1A0A1B0GTJ5 212 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 LOC400499M0QZD8 3231 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 ITGB1BP1O14713 200 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 SPRY3O43610 288 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 HYPMO75409 117 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 LINC00614P0C842 121 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 IGLC2P0DOY2 106 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 IGLC3P0DOY3 106 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 SFTPCP11686 197 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 TAS2R45P59539 299 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 SLAQ13239 276 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 COX19Q49B96 90 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 DMRTA1Q5VZB9 504 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 ATOH7Q8N100 152 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.9□□□□□ -0.98
SNIP1-204ENST00000638725 TSKUQ8WUA8 353 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 ITLN1Q8WWA0 313 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 SLC35E1Q96K37 410 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 TXN2Q99757 166 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 UPK2O00526 184 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 MMP23AO75900 390 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 APCSP02743 223 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 CD59P13987 128 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 USF1P22415 310 aaPredicted RBP8.9□□□□□ -0.98
SNIP1-204ENST00000638725 CHRNB4P30926 498 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms