RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 SFRP2Q96HF1 295 aa11.99□□□□□ -0.49
SCARB2-208ENST00000638372 SAA1P0DJI8 122 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-208ENST00000638372 PAFAH1B2P68402 229 aa11.98□□□□□ -0.49
SCARB2-208ENST00000638372 MEF2CQ06413 473 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-208ENST00000638372 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-208ENST00000638372 Q1RN00 199 aa11.98□□□□□ -0.49
SCARB2-208ENST00000638372 DYNLRB2Q8TF09 96 aa11.98□□□□□ -0.49
SCARB2-208ENST00000638372 NEU1Q99519 415 aa11.98□□□□□ -0.49
SCARB2-208ENST00000638372 SLC17A3O00476 420 aa11.98□□□□□ -0.49
SCARB2-208ENST00000638372 HLA-DQA1P01909 254 aa11.98□□□□□ -0.49
SCARB2-208ENST00000638372 NBEAP1P0C6P0 100 aa11.98□□□□□ -0.49
SCARB2-208ENST00000638372 CBLN1P23435 193 aa11.98□□□□□ -0.49
SCARB2-208ENST00000638372 ZNF738Q8NE65 137 aa11.98□□□□□ -0.49
SCARB2-208ENST00000638372 C19orf24Q9BVV8 132 aa11.98□□□□□ -0.49
SCARB2-208ENST00000638372 IGHV1-46P01743 117 aa11.98□□□□□ -0.49
SCARB2-208ENST00000638372 SRIP30626 198 aa11.98□□□□□ -0.49
SCARB2-208ENST00000638372 RELBQ01201 579 aa11.98□□□□□ -0.49
SCARB2-208ENST00000638372 C19orf35Q6ZS72 473 aa11.98□□□□□ -0.49
SCARB2-208ENST00000638372 WFDC1Q9HC57 220 aa11.98□□□□□ -0.49
SCARB2-208ENST00000638372 BET1LQ9NYM9 111 aa11.98□□□□□ -0.49
SCARB2-208ENST00000638372 RPL7P18124 248 aaKnown RBP11.97□□□□□ -0.49
SCARB2-208ENST00000638372 CCL20P78556 96 aa11.97□□□□□ -0.49
SCARB2-208ENST00000638372 QRFPP83859 136 aa11.97□□□□□ -0.49
SCARB2-208ENST00000638372 PLSCR4Q9NRQ2 329 aa11.97□□□□□ -0.49
SCARB2-208ENST00000638372 CDK2AP1O14519 115 aa11.97□□□□□ -0.49
SCARB2-208ENST00000638372 DUTP33316 252 aaKnown RBP11.97□□□□□ -0.49
SCARB2-208ENST00000638372 LY6DQ14210 128 aa11.97□□□□□ -0.49
SCARB2-208ENST00000638372 TM4SF20Q53R12 229 aa11.97□□□□□ -0.49
SCARB2-208ENST00000638372 PIMREGQ9BSJ6 248 aa11.97□□□□□ -0.49
SCARB2-208ENST00000638372 ARFGEF3Q5TH69 2177 aa11.97□□□□□ -0.49
SCARB2-208ENST00000638372 LY6G6EA0A0G2JKS1 128 aa11.97□□□□□ -0.49
SCARB2-208ENST00000638372 SCO2A0A1W2PP80 73 aa11.97□□□□□ -0.49
SCARB2-208ENST00000638372 SRRM5B3KS81 715 aa11.97□□□□□ -0.49
SCARB2-208ENST00000638372 ATP5IP56385 69 aaPredicted RBP11.97□□□□□ -0.49
SCARB2-208ENST00000638372 ICAM4Q14773 271 aa11.97□□□□□ -0.49
SCARB2-208ENST00000638372 OR4C5Q8NGB2 326 aa11.97□□□□□ -0.49
SCARB2-208ENST00000638372 CLDND2Q8NHS1 167 aa11.97□□□□□ -0.49
SCARB2-208ENST00000638372 U3KQA8 63 aa11.97□□□□□ -0.49
SCARB2-208ENST00000638372 YLPM1P49750 1951 aaKnown RBP11.97□□□□□ -0.49
SCARB2-208ENST00000638372 NAPSAO96009 420 aa11.97□□□□□ -0.49
SCARB2-208ENST00000638372 METRNQ9UJH8 293 aa11.97□□□□□ -0.49
SCARB2-208ENST00000638372 FOXH1O75593 365 aa11.96□□□□□ -0.49
SCARB2-208ENST00000638372 MIR17HGQ75NE6 70 aa11.96□□□□□ -0.49
SCARB2-208ENST00000638372 OR4D5Q8NGN0 318 aa11.96□□□□□ -0.49
SCARB2-208ENST00000638372 FOXA2Q9Y261 457 aaPredicted RBP11.96□□□□□ -0.49
SCARB2-208ENST00000638372 SONP18583 2426 aaKnown RBP11.96□□□□□ -0.49
SCARB2-208ENST00000638372 TRAV30A0A087WSZ9 112 aa11.96□□□□□ -0.49
SCARB2-208ENST00000638372 TMEM42Q69YG0 159 aa11.96□□□□□ -0.49
SCARB2-208ENST00000638372 RNASE6Q93091 150 aaKnown RBP11.96□□□□□ -0.49
SCARB2-208ENST00000638372 GGACTQ9BVM4 153 aa11.96□□□□□ -0.49
SCARB2-208ENST00000638372 ANKHD1Q8IWZ3 2542 aaKnown RBP11.96□□□□□ -0.49
SCARB2-208ENST00000638372 PIEZO1Q92508 2521 aa11.96□□□□□ -0.5
SCARB2-208ENST00000638372 ZNF207O43670 478 aaKnown RBP11.96□□□□□ -0.5
SCARB2-208ENST00000638372 PDLIM4P50479 330 aa11.96□□□□□ -0.5
SCARB2-208ENST00000638372 SLC25A33Q9BSK2 321 aa11.96□□□□□ -0.5
SCARB2-208ENST00000638372 MRPL32Q9BYC8 188 aaKnown RBP11.96□□□□□ -0.5
SCARB2-208ENST00000638372 CKS2P33552 79 aa11.95□□□□□ -0.5
SCARB2-208ENST00000638372 PKIAP61925 76 aa11.95□□□□□ -0.5
SCARB2-208ENST00000638372 AMY1AP04745 511 aa11.95□□□□□ -0.5
SCARB2-208ENST00000638372 LRTM2Q8N967 370 aa11.95□□□□□ -0.5
SCARB2-208ENST00000638372 OR4B1Q8NGF8 309 aa11.95□□□□□ -0.5
SCARB2-208ENST00000638372 OR9G9P0C7N8 305 aa11.95□□□□□ -0.5
SCARB2-208ENST00000638372 GCSAMLQ5JQS6 135 aa11.95□□□□□ -0.5
SCARB2-208ENST00000638372 HSPB8Q9UJY1 196 aa11.95□□□□□ -0.5
SCARB2-208ENST00000638372 IGHV3-66A0A0C4DH42 116 aa11.95□□□□□ -0.5
SCARB2-208ENST00000638372 CDX1P47902 265 aaPredicted RBP11.95□□□□□ -0.5
SCARB2-208ENST00000638372 OR10J6PQ8NGY7 276 aa11.95□□□□□ -0.5
SCARB2-208ENST00000638372 RFNGQ9Y644 331 aa11.95□□□□□ -0.5
SCARB2-208ENST00000638372 FOXA3P55318 350 aaPredicted RBP11.94□□□□□ -0.5
SCARB2-208ENST00000638372 ZNF841Q6ZN19 808 aa11.94□□□□□ -0.5
SCARB2-208ENST00000638372 EIF4E3Q8N5X7 224 aaKnown RBP11.94□□□□□ -0.5
SCARB2-208ENST00000638372 HS3ST6Q96QI5 342 aa11.94□□□□□ -0.5
SCARB2-208ENST00000638372 SCGB1C2P0DMR2 95 aa11.94□□□□□ -0.5
SCARB2-208ENST00000638372 ID1P41134 155 aa11.94□□□□□ -0.5
SCARB2-208ENST00000638372 CA7P43166 264 aa11.94□□□□□ -0.5
SCARB2-208ENST00000638372 UPK2O00526 184 aa11.94□□□□□ -0.5
SCARB2-208ENST00000638372 TIMP3P35625 211 aa11.94□□□□□ -0.5
SCARB2-208ENST00000638372 LINC00205P59089 165 aa11.94□□□□□ -0.5
SCARB2-208ENST00000638372 SCGB1D4Q6XE38 83 aa11.94□□□□□ -0.5
SCARB2-208ENST00000638372 PLXNA4Q9HCM2 1894 aa11.94□□□□□ -0.5
SCARB2-208ENST00000638372 PTPN13Q12923 2485 aa11.94□□□□□ -0.5
SCARB2-208ENST00000638372 NPPCP23582 126 aa11.94□□□□□ -0.5
SCARB2-208ENST00000638372 FGF16O43320 207 aa11.93□□□□□ -0.5
SCARB2-208ENST00000638372 VENTXO95231 258 aa11.93□□□□□ -0.5
SCARB2-208ENST00000638372 TMEM97Q5BJF2 176 aa11.93□□□□□ -0.5
SCARB2-208ENST00000638372 TMEM144Q7Z5S9 345 aa11.93□□□□□ -0.5
SCARB2-208ENST00000638372 CCL19Q99731 98 aa11.93□□□□□ -0.5
SCARB2-208ENST00000638372 A0A1W2PS18 150 aa11.93□□□□□ -0.5
SCARB2-208ENST00000638372 C15orf61A6NNL5 157 aa11.93□□□□□ -0.5
SCARB2-208ENST00000638372 C1QTNF9BB2RNN3 333 aa11.93□□□□□ -0.5
SCARB2-208ENST00000638372 MAS1LP35410 378 aa11.93□□□□□ -0.5
SCARB2-208ENST00000638372 C10orf55Q5SWW7 151 aa11.93□□□□□ -0.5
SCARB2-208ENST00000638372 NEU4Q8WWR8 484 aaPredicted RBP11.93□□□□□ -0.5
SCARB2-208ENST00000638372 VSIRQ9H7M9 311 aa11.93□□□□□ -0.5
SCARB2-208ENST00000638372 SLC25A15Q9Y619 301 aa11.93□□□□□ -0.5
SCARB2-208ENST00000638372 MED13Q9UHV7 2174 aa11.93□□□□□ -0.5
SCARB2-208ENST00000638372 CBY3A6NI87 242 aa11.93□□□□□ -0.5
SCARB2-208ENST00000638372 GPX4P36969 197 aaPredicted RBP11.93□□□□□ -0.5
SCARB2-208ENST00000638372 RELQ04864 619 aaPredicted RBP11.93□□□□□ -0.5
SCARB2-208ENST00000638372 ATP5G2Q06055 141 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms