RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 OR8B3Q8NGG8 313 aa12.37□□□□□ -0.43
SCN8A-214ENST00000637709 ITLN2Q8WWU7 325 aaPredicted RBP12.37□□□□□ -0.43
SCN8A-214ENST00000637709 OR8B2Q96RD0 313 aa12.37□□□□□ -0.43
SCN8A-214ENST00000637709 NPVFQ9HCQ7 196 aa12.37□□□□□ -0.43
SCN8A-214ENST00000637709 BET1LQ9NYM9 111 aa12.37□□□□□ -0.43
SCN8A-214ENST00000637709 OR2C1O95371 312 aa12.37□□□□□ -0.43
SCN8A-214ENST00000637709 ACOT6Q3I5F7 207 aaPredicted RBP12.37□□□□□ -0.43
SCN8A-214ENST00000637709 TEPPQ6URK8 271 aa12.37□□□□□ -0.43
SCN8A-214ENST00000637709 DERL1Q9BUN8 251 aa12.37□□□□□ -0.43
SCN8A-214ENST00000637709 CYB5BO43169 146 aa12.36□□□□□ -0.43
SCN8A-214ENST00000637709 RNASE2P10153 161 aaKnown RBP12.36□□□□□ -0.43
SCN8A-214ENST00000637709 HLA-DRB5Q30154 266 aa12.36□□□□□ -0.43
SCN8A-214ENST00000637709 TMEM177Q53S58 311 aa12.36□□□□□ -0.43
SCN8A-214ENST00000637709 NDUFA4L2Q9NRX3 87 aa12.36□□□□□ -0.43
SCN8A-214ENST00000637709 LSM4Q9Y4Z0 139 aaKnown RBP12.36□□□□□ -0.43
SCN8A-214ENST00000637709 INSIG2Q9Y5U4 225 aa12.36□□□□□ -0.43
SCN8A-214ENST00000637709 PGPEP1LA6NFU8 196 aa12.36□□□□□ -0.43
SCN8A-214ENST00000637709 IGLV1-47P01700 117 aa12.36□□□□□ -0.43
SCN8A-214ENST00000637709 GAMTQ14353 236 aa12.36□□□□□ -0.43
SCN8A-214ENST00000637709 CLEC12BQ2HXU8 276 aa12.36□□□□□ -0.43
SCN8A-214ENST00000637709 TVP23CQ96ET8 276 aa12.36□□□□□ -0.43
SCN8A-214ENST00000637709 BUB1B-PAK6H3BSN5 160 aa12.35□□□□□ -0.43
SCN8A-214ENST00000637709 MRGPRG-AS1Q2M3A8 158 aa12.35□□□□□ -0.43
SCN8A-214ENST00000637709 TMEM30BQ3MIR4 351 aa12.35□□□□□ -0.43
SCN8A-214ENST00000637709 OR4P4Q8NGL7 312 aa12.35□□□□□ -0.43
SCN8A-214ENST00000637709 CLEC7AQ9BXN2 247 aa12.35□□□□□ -0.43
SCN8A-214ENST00000637709 MRPL36Q9P0J6 103 aaKnown RBP12.35□□□□□ -0.43
SCN8A-214ENST00000637709 LRRK2Q5S007 2527 aa12.35□□□□□ -0.43
SCN8A-214ENST00000637709 IGHV1-3A0A0C4DH29 117 aa12.35□□□□□ -0.43
SCN8A-214ENST00000637709 MBP02144 154 aa12.35□□□□□ -0.43
SCN8A-214ENST00000637709 PSMB3P49720 205 aa12.35□□□□□ -0.43
SCN8A-214ENST00000637709 RHEBQ15382 184 aa12.35□□□□□ -0.43
SCN8A-214ENST00000637709 ADIRFQ15847 76 aa12.35□□□□□ -0.43
SCN8A-214ENST00000637709 TNXAQ16473 311 aa12.35□□□□□ -0.43
SCN8A-214ENST00000637709 SLC35E3Q7Z769 313 aa12.35□□□□□ -0.43
SCN8A-214ENST00000637709 PDPNQ86YL7 162 aa12.35□□□□□ -0.43
SCN8A-214ENST00000637709 NEIL1Q96FI4 390 aaPredicted RBP12.35□□□□□ -0.43
SCN8A-214ENST00000637709 SMIM7Q9BQ49 75 aa12.35□□□□□ -0.43
SCN8A-214ENST00000637709 DOK5Q9P104 306 aa12.35□□□□□ -0.43
SCN8A-214ENST00000637709 A0A087X0M5 115 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 TRBV23-1A0A0A0MS06 115 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 A0A1B0GX30 115 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 A0A1W2PPI3 338 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 AREGP15514 252 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 HNF1AP20823 631 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 OR10J1P30954 320 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 OPRK1P41145 380 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 NECAP1Q8NC96 275 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 ZNF257Q9Y2Q1 563 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 TGIF2-C20orf24A0A0A6YYL0 155 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 C11orf94C9JXX5 98 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 FCN1O00602 326 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 PRB1P04280 392 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 CXCL1P09341 107 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 NPPCP23582 126 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 MIR17HGQ75NE6 70 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 LINC00311Q8N616 119 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 OR1L8Q8NGR8 309 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 RPEQ96AT9 228 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 FBXL15Q9H469 300 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 SMDT1Q9H4I9 107 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 FNDC4Q9H6D8 234 aaPredicted RBP12.34□□□□□ -0.43
SCN8A-214ENST00000637709 LPAR2Q9HBW0 351 aa12.34□□□□□ -0.43
SCN8A-214ENST00000637709 ZFP36P26651 326 aaKnown RBP12.33□□□□□ -0.44
SCN8A-214ENST00000637709 HABP2Q14520 560 aaPredicted RBP12.33□□□□□ -0.44
SCN8A-214ENST00000637709 FAM78BQ5VT40 261 aa12.33□□□□□ -0.44
SCN8A-214ENST00000637709 OR5B3Q8NH48 314 aa12.33□□□□□ -0.44
SCN8A-214ENST00000637709 RAB1CQ92928 201 aa12.33□□□□□ -0.44
SCN8A-214ENST00000637709 PARLQ9H300 379 aa12.33□□□□□ -0.44
SCN8A-214ENST00000637709 UNKLQ9H9P5 680 aaKnown RBP12.33□□□□□ -0.44
SCN8A-214ENST00000637709 ZANQ9Y493 2812 aa12.33□□□□□ -0.44
SCN8A-214ENST00000637709 ABCA2Q9BZC7 2435 aa12.33□□□□□ -0.44
SCN8A-214ENST00000637709 IFNA1P01562 189 aa12.33□□□□□ -0.44
SCN8A-214ENST00000637709 USF1P22415 310 aaPredicted RBP12.33□□□□□ -0.44
SCN8A-214ENST00000637709 LCN2P80188 198 aa12.33□□□□□ -0.44
SCN8A-214ENST00000637709 RBMS3Q6XE24 437 aaKnown RBP12.33□□□□□ -0.44
SCN8A-214ENST00000637709 SPNS3Q6ZMD2 512 aa12.33□□□□□ -0.44
SCN8A-214ENST00000637709 C15orf54Q8N8G6 183 aa12.33□□□□□ -0.44
SCN8A-214ENST00000637709 ZNF596Q8TC21 504 aa12.33□□□□□ -0.44
SCN8A-214ENST00000637709 Q8WTZ3 238 aa12.33□□□□□ -0.44
SCN8A-214ENST00000637709 TIMD4Q96H15 378 aa12.33□□□□□ -0.44
SCN8A-214ENST00000637709 SSBP3Q9BWW4 388 aaPredicted RBP12.33□□□□□ -0.44
SCN8A-214ENST00000637709 GSX1Q9H4S2 264 aaPredicted RBP12.33□□□□□ -0.44
SCN8A-214ENST00000637709 RNF224P0DH78 156 aa12.32□□□□□ -0.44
SCN8A-214ENST00000637709 PRRX1P54821 245 aa12.32□□□□□ -0.44
SCN8A-214ENST00000637709 ZNF90Q03938 601 aa12.32□□□□□ -0.44
SCN8A-214ENST00000637709 MORN5Q5VZ52 161 aa12.32□□□□□ -0.44
SCN8A-214ENST00000637709 TMEM167AQ8TBQ9 72 aa12.32□□□□□ -0.44
SCN8A-214ENST00000637709 P2RX4Q99571 388 aa12.32□□□□□ -0.44
SCN8A-214ENST00000637709 MIOXQ9UGB7 285 aa12.32□□□□□ -0.44
SCN8A-214ENST00000637709 DOPEY1Q5JWR5 2465 aa12.32□□□□□ -0.44
SCN8A-214ENST00000637709 TIMM23O14925 209 aa12.32□□□□□ -0.44
SCN8A-214ENST00000637709 LIPFP07098 398 aa12.32□□□□□ -0.44
SCN8A-214ENST00000637709 OR10J4P0C629 311 aa12.32□□□□□ -0.44
SCN8A-214ENST00000637709 MISP3Q96FF7 219 aa12.32□□□□□ -0.44
SCN8A-214ENST00000637709 UHRF2Q96PU4 802 aa12.32□□□□□ -0.44
SCN8A-214ENST00000637709 FAM103A1Q9BTL3 118 aaKnown RBP12.32□□□□□ -0.44
SCN8A-214ENST00000637709 METTL1Q9UBP6 276 aaKnown RBP12.32□□□□□ -0.44
SCN8A-214ENST00000637709 LINC00869P0C866 280 aa12.31□□□□□ -0.44
SCN8A-214ENST00000637709 RAB5AP20339 215 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms