RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 IGLV2-8P01709 118 aa12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 MGST1P10620 155 aaKnown RBP12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 NTF3P20783 257 aa12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 IGHV1-2P23083 117 aa12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 LINC00696Q6ZRV3 163 aa12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 C18orf32Q8TCD1 76 aa12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 IGF2BP2-AS1Q96M15 143 aa12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 GCM1Q9NP62 436 aa12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 RAB9BQ9NP90 201 aa12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 COX11Q9Y6N1 276 aa12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 CACNA1DQ01668 2161 aa12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 TRAV9-2A0A087WT02 112 aa12.16□□□□□ -0.46
CACNA1A-220ENST00000635988 CCL25O15444 150 aa12.16□□□□□ -0.46
CACNA1A-220ENST00000635988 HSBP1O75506 76 aa12.16□□□□□ -0.46
CACNA1A-220ENST00000635988 OR4A47Q6IF82 309 aa12.16□□□□□ -0.46
CACNA1A-220ENST00000635988 FAM19A2Q8N3H0 131 aa12.16□□□□□ -0.46
CACNA1A-220ENST00000635988 PPIAL4AQ9Y536 164 aa12.16□□□□□ -0.46
CACNA1A-220ENST00000635988 WDR87Q6ZQQ6 2873 aa12.16□□□□□ -0.46
CACNA1A-220ENST00000635988 GGTLC3B5MD39 225 aa12.16□□□□□ -0.46
CACNA1A-220ENST00000635988 LOXL3P58215 753 aa12.16□□□□□ -0.46
CACNA1A-220ENST00000635988 LRRC29Q8WV35 223 aa12.16□□□□□ -0.46
CACNA1A-220ENST00000635988 CLEC7AQ9BXN2 247 aa12.16□□□□□ -0.46
CACNA1A-220ENST00000635988 PRNDQ9UKY0 176 aa12.16□□□□□ -0.46
CACNA1A-220ENST00000635988 HCFC1P51610 2035 aa12.15□□□□□ -0.46
CACNA1A-220ENST00000635988 HOXA4Q00056 320 aaPredicted RBP12.15□□□□□ -0.46
CACNA1A-220ENST00000635988 KLF5Q13887 457 aaPredicted RBP12.15□□□□□ -0.46
CACNA1A-220ENST00000635988 FAM214BQ7L5A3 538 aa12.15□□□□□ -0.46
CACNA1A-220ENST00000635988 C22orf15Q8WYQ4 148 aa12.15□□□□□ -0.46
CACNA1A-220ENST00000635988 ZNF503Q96F45 646 aa12.15□□□□□ -0.46
CACNA1A-220ENST00000635988 PLPPR2Q96GM1 343 aa12.15□□□□□ -0.46
CACNA1A-220ENST00000635988 ADTRPQ96IZ2 230 aa12.15□□□□□ -0.46
CACNA1A-220ENST00000635988 OR2V2Q96R30 315 aa12.15□□□□□ -0.46
CACNA1A-220ENST00000635988 CHRDL1Q9BU40 450 aa12.15□□□□□ -0.46
CACNA1A-220ENST00000635988 SAP30LQ9HAJ7 183 aa12.15□□□□□ -0.46
CACNA1A-220ENST00000635988 K7EP13 123 aa12.15□□□□□ -0.46
CACNA1A-220ENST00000635988 C8orf88P0DMB2 117 aa12.15□□□□□ -0.46
CACNA1A-220ENST00000635988 POU2AF1Q16633 256 aa12.15□□□□□ -0.46
CACNA1A-220ENST00000635988 PEAR1Q5VY43 1037 aaPredicted RBP12.15□□□□□ -0.46
CACNA1A-220ENST00000635988 FAM231DQ6ZW35 169 aa12.15□□□□□ -0.46
CACNA1A-220ENST00000635988 MRPL32Q9BYC8 188 aaKnown RBP12.15□□□□□ -0.46
CACNA1A-220ENST00000635988 ZNF257Q9Y2Q1 563 aa12.15□□□□□ -0.46
CACNA1A-220ENST00000635988 EYSQ5T1H1 3165 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 TRGV5A0A0B4J1U4 118 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 TRAV34A0A0B4J273 112 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 IGHV1-69-2A0A0G2JMI3 117 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 LYZL6O75951 148 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 HOXC12P31275 282 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 HINT1P49773 126 aaPredicted RBP12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 ZNF134P52741 427 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 SPRY4Q9C004 299 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 OR51B2Q9Y5P1 312 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 DOCK7Q96N67 2140 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 PATE3B3GLJ2 98 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 RBX1P62877 108 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 SLAQ13239 276 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 TBR1Q16650 682 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 FAM162BQ5T6X4 162 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 TRIB1Q96RU8 372 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 DEFB127Q9H1M4 99 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 IDI2-AS1Q9NZ38 188 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 DUSP13Q9UII6 198 aa12.14□□□□□ -0.47
CACNA1A-220ENST00000635988 FAM181BA6NEQ2 426 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 IGKV3-15P01624 115 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 ACP1P24666 158 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 SPACA3Q8IXA5 215 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 MDS2Q8NDY4 140 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 OR8B3Q8NGG8 313 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 OR8B2Q96RD0 313 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 IGHV2OR16-5A0A0B4J2B6 119 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 AHRRA9YTQ3 701 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 C21orf140B9A014 251 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 M0R2Z0 102 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 CD46P15529 392 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 UBE2G1P62253 170 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 TNXAQ16473 311 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 Q6ZT83 130 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 TDHQ8IZJ6 230 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 GRAMD2BQ96HH9 432 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 SLC25A33Q9BSK2 321 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 HINT2Q9BX68 163 aa12.13□□□□□ -0.47
CACNA1A-220ENST00000635988 J3QR06 171 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 ARG2P78540 354 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 PRCDQ00LT1 54 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 ATOH7Q8N100 152 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 MBD6Q96DN6 1003 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 NCOR1P1Q9H4R4 102 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 CALYQ9NYX4 217 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 SPRR3Q9UBC9 169 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 TET2Q6N021 2002 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 DNAJC13O75165 2243 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 IGKV1D-17A0A075B6S4 117 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 SRRM5B3KS81 715 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 H0YJW9 148 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 OR2J3O76001 311 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 TNFSF4P23510 183 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 FABP6P51161 128 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 MFAP2P55001 183 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 C2orf83Q53S99 150 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 UNQ5815/PRO19632Q6UWF5 114 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms