RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 HSD17B11Q8NBQ5 300 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 Q8TCH9 128 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 RXFP4Q8TDU9 374 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 AKR1E2Q96JD6 320 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 RTL8AQ9BWD3 113 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 SLC25A31Q9H0C2 315 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 PARP12Q9H0J9 701 aaKnown RBP3.87□□□□□ -1.79
LINC00550-201ENST00000629293 HES4Q9HCC6 221 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 TRGV11A0A075B6L2 103 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 PIGBOS1A0A0B4J2F0 54 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 GAGE12BA1L429 117 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 GAGE12HA6NDE8 117 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 UMAD1C9J7I0 102 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 IGKV1-39P01597 117 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 IGKV1D-39P04432 117 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 ZNF616Q08AN1 781 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 ZNF146Q15072 292 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 TMEM182Q6ZP80 229 aaPredicted RBP3.86□□□□□ -1.79
LINC00550-201ENST00000629293 ZNRF1Q8ND25 227 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 NEK7Q8TDX7 302 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 LSM10Q969L4 123 aaKnown RBP3.86□□□□□ -1.79
LINC00550-201ENST00000629293 SMDT1Q9H4I9 107 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 OR1A1Q9P1Q5 309 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 A0A1B0GU03 582 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 hCG_1809904A0A1W2PP81 198 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 A0A1W2PPE2 198 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 A0A1W2PR64 198 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 NKX6-3A6NJ46 265 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 OR2H2O95918 312 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 IGLL1P15814 213 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 PPT1P50897 306 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 DYNLT3P51808 116 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 SERTAD4-AS1Q5TG53 156 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 LINC00518Q8N0U6 118 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 C15orf54Q8N8G6 183 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 SYT8Q8NBV8 401 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 OR10V1Q8NGI7 309 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 OR10J5Q8NHC4 309 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 TMEM170AQ8WVE7 144 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 GPR146Q96CH1 333 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 DCTN5Q9BTE1 182 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 MAGT1Q9H0U3 335 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 FAM234AQ9H0X4 552 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 TUBA4BQ9H853 241 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 SMCO4Q9NRQ5 59 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 POLDIP2Q9Y2S7 368 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 RFNGQ9Y644 331 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 COL7A1Q02388 2944 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 TMEM210A6NLX4 147 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 TXNL1O43396 289 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 TNFSF12O43508 249 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 CD28P10747 220 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 PSG2P11465 335 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 MZT1Q08AG7 82 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 EIF4EBP1Q13541 118 aaPredicted RBP3.86□□□□□ -1.79
LINC00550-201ENST00000629293 CLINT1Q14677 625 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 WDR82Q6UXN9 313 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 OR5C1Q8NGR4 320 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 OR5R1Q8NH85 324 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 FAM213BQ8TBF2 198 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 ATP5SQ99766 215 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 CITED2Q99967 270 aaPredicted RBP3.86□□□□□ -1.79
LINC00550-201ENST00000629293 NPFFR1Q9GZQ6 430 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 TOLLIPQ9H0E2 274 aa3.86□□□□□ -1.79
LINC00550-201ENST00000629293 A0A1B0GWJ7 208 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 CHST1O43916 411 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 IGKV1-5P01602 117 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 ZNF44P15621 663 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 S100GP29377 79 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 HOXA1P49639 335 aaPredicted RBP3.85□□□□□ -1.79
LINC00550-201ENST00000629293 SSX2Q16385 188 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 ZNF585BQ52M93 769 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 DPPA3Q6W0C5 159 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 Q8N7P7 452 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 OR2G3Q8NGZ4 309 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 HIST1H2BAQ96A08 127 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 GNPNAT1Q96EK6 184 aaPredicted RBP3.85□□□□□ -1.79
LINC00550-201ENST00000629293 YPEL4Q96NS1 127 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 CLCC1Q96S66 551 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 ABHD14AQ9BUJ0 271 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 PBDC1Q9BVG4 233 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 SLC35B3Q9H1N7 401 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 SERTAD4Q9NUC0 356 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 AURKAIP1Q9NWT8 199 aaPredicted RBP3.85□□□□□ -1.79
LINC00550-201ENST00000629293 OR14J1Q9UGF5 321 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 MLXQ9UH92 298 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 WSB1Q9Y6I7 421 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 TNCP24821 2201 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 C7orf77A4D0Y5 90 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 SIRPB1O00241 398 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 RRHO14718 337 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 PRH1P02810 166 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 P0C879 139 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 HOXD3P31249 432 aaPredicted RBP3.85□□□□□ -1.79
LINC00550-201ENST00000629293 MAS1LP35410 378 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 CEBPDP49716 269 aaPredicted RBP3.85□□□□□ -1.79
LINC00550-201ENST00000629293 MFAP4P55083 255 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 TAS2R30P59541 319 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 CCL20P78556 96 aa3.85□□□□□ -1.79
LINC00550-201ENST00000629293 RHEBQ15382 184 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms