RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 SSBP4Q9BWG4 385 aaPredicted RBP4.74□□□□□ -1.65
ERCC6-213ENST00000624341 TMEM160Q9NX00 188 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 GREB1Q4ZG55 1949 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 CDX4O14627 284 aaPredicted RBP4.74□□□□□ -1.65
ERCC6-213ENST00000624341 MPZP25189 248 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 LOXL3P58215 753 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 C1QL4Q86Z23 238 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 ALKBH7Q9BT30 221 aaPredicted RBP4.74□□□□□ -1.65
ERCC6-213ENST00000624341 DEPPQ9NTK1 212 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 ZNF256Q9Y2P7 627 aaPredicted RBP4.74□□□□□ -1.65
ERCC6-213ENST00000624341 DOCK4Q8N1I0 1966 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 TRBV6-7A0A0A0MS04 114 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 A0A0G2JMM0 328 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 A0A1W2PPB8 328 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 A0A1W2PRS3 328 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 KIR3DP1A8MWS1 328 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 C9orf172C9J069 976 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 RAB9AP51151 201 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 RELQ04864 619 aaPredicted RBP4.74□□□□□ -1.65
ERCC6-213ENST00000624341 SMAGPQ0VAQ4 97 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 RNFT1Q5M7Z0 435 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 CCDC144NLQ6NUI1 221 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 RNF144BQ7Z419 303 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 OCC1Q8TAD7 63 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 IFI27L2Q9H2X8 130 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 S4R3C0 116 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 IGKV3D-15A0A087WSY6 115 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 PEX7O00628 323 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 RAMP3O60896 148 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 IGKV3-15P01624 115 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 IL4P05112 153 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 SMIM13P0DJ93 91 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 ADCYAP1P18509 176 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 CX3CL1P78423 397 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 ACP7Q6ZNF0 438 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 FLVCR1-AS1Q8TAF5 88 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 C1QTNF5Q9BXJ0 243 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 UBTD1Q9HAC8 227 aa4.74□□□□□ -1.65
ERCC6-213ENST00000624341 TRBV20OR9-2A0A075B6H5 130 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 HIGD1CA8MV81 97 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 MFAP4P55083 255 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 PPP1R32Q7Z5V6 425 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 LHFPL1Q86WI0 220 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 FAM131CQ96AQ9 280 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 WBP1Q96G27 269 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 TFF1P04155 84 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 ID1P41134 155 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 PSG7Q13046 419 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 SIGLEC12Q96PQ1 595 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 PHLDA3Q9Y5J5 127 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 NYNRINQ9P2P1 1898 aaKnown RBP4.73□□□□□ -1.65
ERCC6-213ENST00000624341 TRBV24-1A0A075B6N3 115 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 IGKV1-12A0A0C4DH73 117 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 AHRRA9YTQ3 701 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 IGKV1D-12P01611 117 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 PF4P02776 101 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 PDCD11Q14690 1871 aaKnown RBP4.73□□□□□ -1.65
ERCC6-213ENST00000624341 C1orf185Q5T7R7 199 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 STPG1Q5TH74 334 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 UNQ5815/PRO19632Q6UWF5 114 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 OR9G1Q8NH87 305 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 TMEM171Q8WVE6 324 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 DNASE2BQ8WZ79 361 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 PRELID3AQ96N28 172 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 BEX4Q9NWD9 120 aaPredicted RBP4.73□□□□□ -1.65
ERCC6-213ENST00000624341 PKDREJQ9NTG1 2253 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 SHANK1Q9Y566 2161 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 FAM181BA6NEQ2 426 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 FOXI3A8MTJ6 420 aaPredicted RBP4.73□□□□□ -1.65
ERCC6-213ENST00000624341 C5orf24Q7Z6I8 188 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 LINC00470Q9BZP3 86 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 CHRNA10Q9GZZ6 450 aa4.73□□□□□ -1.65
ERCC6-213ENST00000624341 MTCL1Q9Y4B5 1905 aaKnown RBP4.73□□□□□ -1.65
ERCC6-213ENST00000624341 A0A1B0GUT8 65 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 CA1P00915 261 aaPredicted RBP4.72□□□□□ -1.65
ERCC6-213ENST00000624341 COX6CP09669 75 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 CD33P20138 364 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 CCL1P22362 96 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 HGFACQ04756 655 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 OR10J6PQ8NGY7 276 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 OR11H12B2RN74 326 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 H3BUT2 72 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 CELA3BP08861 270 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 RPS20P60866 119 aaKnown RBP4.72□□□□□ -1.65
ERCC6-213ENST00000624341 RRN3P1Q2M238 152 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 FAM216BQ8N7L0 139 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 OR11H1Q8NG94 326 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 OR11H2Q8NH07 326 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 OR52E5Q8NH55 327 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 TMEM186Q96B77 213 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 METTL26Q96S19 204 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 SELENOKQ9Y6D0 94 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 IGHV3OR16-8A0A075B7F1 116 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 IGHV3-49A0A0A0MS15 119 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 TRAV24A0A0B4J272 114 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 IZUMO1RA6ND01 250 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 IFNL4K9M1U5 179 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 GNG5P63218 68 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 LRTM2Q8N967 370 aa4.72□□□□□ -1.65
ERCC6-213ENST00000624341 MBD3L1Q8WWY6 194 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms