RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 RASL11BQ9BPW5 248 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 TNFRSF19Q9NS68 423 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 WASHC3Q9Y3C0 194 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 HILPDAQ9Y5L2 63 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 TRAV3A0A0B4J244 114 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 P01737 135 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 CLEC2AQ6UVW9 174 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 STARD4Q96DR4 205 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 FGF23Q9GZV9 251 aaPredicted RBP10.67□□□□□ -0.7
MSH6-215ENST00000622629 AAMDCQ9H7C9 122 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 RNF115Q9Y4L5 304 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 M0R143 59 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 S100A7P31151 101 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 PLA2G2EQ9NZK7 142 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 AMMECR1Q9Y4X0 333 aaPredicted RBP10.67□□□□□ -0.7
MSH6-215ENST00000622629 ARHGAP21Q5T5U3 1957 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 A0A1B0GW64 132 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 HYPMO75409 117 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 HTR1DP28221 377 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 CD81P60033 236 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 PRSS33Q8NF86 280 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 ZNF430Q9H8G1 570 aaPredicted RBP10.67□□□□□ -0.7
MSH6-215ENST00000622629 GNG7O60262 68 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 APCSP02743 223 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 C10orf91Q5T1B1 145 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 TCF23Q7RTU1 214 aa10.67□□□□□ -0.7
MSH6-215ENST00000622629 M0R2Z0 102 aa10.66□□□□□ -0.7
MSH6-215ENST00000622629 MOSP00540 346 aa10.66□□□□□ -0.7
MSH6-215ENST00000622629 MRPL20Q9BYC9 149 aaKnown RBP10.66□□□□□ -0.7
MSH6-215ENST00000622629 MBNL3Q9NUK0 354 aaKnown RBP10.66□□□□□ -0.7
MSH6-215ENST00000622629 BRS3P32247 399 aa10.66□□□□□ -0.7
MSH6-215ENST00000622629 MC5RP33032 325 aa10.66□□□□□ -0.7
MSH6-215ENST00000622629 FAM90A2PQ658T7 463 aa10.66□□□□□ -0.7
MSH6-215ENST00000622629 WDR31Q8NA23 367 aa10.66□□□□□ -0.7
MSH6-215ENST00000622629 STXBP6Q8NFX7 210 aa10.66□□□□□ -0.7
MSH6-215ENST00000622629 OR8B3Q8NGG8 313 aa10.66□□□□□ -0.7
MSH6-215ENST00000622629 OR8B2Q96RD0 313 aa10.66□□□□□ -0.7
MSH6-215ENST00000622629 DIRC2Q96SL1 478 aa10.66□□□□□ -0.7
MSH6-215ENST00000622629 DERL1Q9BUN8 251 aa10.66□□□□□ -0.7
MSH6-215ENST00000622629 RAB1BQ9H0U4 201 aa10.66□□□□□ -0.7
MSH6-215ENST00000622629 CCL21O00585 134 aa10.66□□□□□ -0.7
MSH6-215ENST00000622629 CIDEAO60543 219 aa10.66□□□□□ -0.7
MSH6-215ENST00000622629 GCGP01275 180 aa10.66□□□□□ -0.7
MSH6-215ENST00000622629 HIST1H1EP10412 219 aaKnown RBP10.66□□□□□ -0.7
MSH6-215ENST00000622629 TREML4Q6UXN2 200 aa10.66□□□□□ -0.7
MSH6-215ENST00000622629 NAGKQ9UJ70 344 aa10.66□□□□□ -0.7
MSH6-215ENST00000622629 SOD3P08294 240 aa10.65□□□□□ -0.7
MSH6-215ENST00000622629 SELENOTP62341 195 aa10.65□□□□□ -0.7
MSH6-215ENST00000622629 COX19Q49B96 90 aa10.65□□□□□ -0.7
MSH6-215ENST00000622629 SSX7Q7RTT5 188 aa10.65□□□□□ -0.7
MSH6-215ENST00000622629 PLSCR4Q9NRQ2 329 aa10.65□□□□□ -0.7
MSH6-215ENST00000622629 DOPEY2Q9Y3R5 2298 aa10.65□□□□□ -0.7
MSH6-215ENST00000622629 MYOD1P15172 320 aa10.65□□□□□ -0.7
MSH6-215ENST00000622629 CEACAM3P40198 252 aa10.65□□□□□ -0.7
MSH6-215ENST00000622629 BSPH1Q075Z2 132 aa10.65□□□□□ -0.7
MSH6-215ENST00000622629 ZNF596Q8TC21 504 aa10.65□□□□□ -0.7
MSH6-215ENST00000622629 ABHD17AQ96GS6 310 aa10.65□□□□□ -0.7
MSH6-215ENST00000622629 MED12LQ86YW9 2145 aa10.65□□□□□ -0.7
MSH6-215ENST00000622629 ZNF785A8K8V0 405 aa10.65□□□□□ -0.7
MSH6-215ENST00000622629 DIRC3C9JPN6 131 aa10.65□□□□□ -0.7
MSH6-215ENST00000622629 TMSB15BA0A087X1C1 80 aa10.65□□□□□ -0.71
MSH6-215ENST00000622629 AARDQ4LEZ3 155 aa10.65□□□□□ -0.71
MSH6-215ENST00000622629 FAM162BQ5T6X4 162 aa10.65□□□□□ -0.71
MSH6-215ENST00000622629 Q6ZN92 141 aa10.65□□□□□ -0.71
MSH6-215ENST00000622629 FAM90A1Q86YD7 464 aa10.65□□□□□ -0.71
MSH6-215ENST00000622629 OR9G1Q8NH87 305 aa10.65□□□□□ -0.71
MSH6-215ENST00000622629 IFI27L2Q9H2X8 130 aa10.65□□□□□ -0.71
MSH6-215ENST00000622629 C15orf61A6NNL5 157 aa10.64□□□□□ -0.71
MSH6-215ENST00000622629 SLC31A2O15432 143 aa10.64□□□□□ -0.71
MSH6-215ENST00000622629 SAA1P0DJI8 122 aaPredicted RBP10.64□□□□□ -0.71
MSH6-215ENST00000622629 SRIP30626 198 aa10.64□□□□□ -0.71
MSH6-215ENST00000622629 PYY3Q5JQD4 70 aa10.64□□□□□ -0.71
MSH6-215ENST00000622629 FA2HQ7L5A8 372 aa10.64□□□□□ -0.71
MSH6-215ENST00000622629 TRBV24-1A0A075B6N3 115 aa10.64□□□□□ -0.71
MSH6-215ENST00000622629 NPIPB11E5RHQ5 1161 aa10.64□□□□□ -0.71
MSH6-215ENST00000622629 LCN2P80188 198 aa10.64□□□□□ -0.71
MSH6-215ENST00000622629 PRSS3P2Q8NHM4 247 aa10.64□□□□□ -0.71
MSH6-215ENST00000622629 OCC1Q8TAD7 63 aa10.64□□□□□ -0.71
MSH6-215ENST00000622629 NDFIP1Q9BT67 221 aa10.64□□□□□ -0.71
MSH6-215ENST00000622629 GGTLC1Q9BX51 225 aa10.64□□□□□ -0.71
MSH6-215ENST00000622629 CBLN4Q9NTU7 201 aa10.64□□□□□ -0.71
MSH6-215ENST00000622629 TMEM106BQ9NUM4 274 aa10.64□□□□□ -0.71
MSH6-215ENST00000622629 IGKV1D-17A0A075B6S4 117 aa10.64□□□□□ -0.71
MSH6-215ENST00000622629 TCF15Q12870 199 aa10.64□□□□□ -0.71
MSH6-215ENST00000622629 LURAP1LQ8IV03 231 aa10.64□□□□□ -0.71
MSH6-215ENST00000622629 NDUFA2O43678 99 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 IGKV3-15P01624 115 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 ARF6P62330 175 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 EFNB3Q15768 340 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 PRNTQ86SH4 94 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 OSR1Q8TAX0 266 aaPredicted RBP10.63□□□□□ -0.71
MSH6-215ENST00000622629 PPP1R14DQ9NXH3 145 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 TNCP24821 2201 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 C17orf100A8MU93 164 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 IGHV1-46P01743 117 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 HIST3H2BBQ8N257 126 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 OR10W1Q8NGF6 305 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 LINC01560Q8TB33 94 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 TMEM186Q96B77 213 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 HIST1H2BLQ99880 126 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms