RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 KLF4O43474 513 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 TOMM40O96008 361 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 SPINK8P0C7L1 97 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 COX5BP10606 129 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 CCL2P13500 99 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 LEPP41159 167 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 TRBV20-1A0A075B6N2 111 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 C21orf140B9A014 251 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 C1QL1O75973 258 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 P2RY6Q15077 328 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 FBXW9Q5XUX1 488 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 CHAC1Q9BUX1 264 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 TRAV8-1A0A0A6YYK1 113 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 MLNRO43193 412 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 SERF1AO75920 110 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 CCL20P78556 96 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 OR11H4Q8NGC9 324 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 WNT2BQ93097 391 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 C5orf66Q9H5L9 145 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 IDI2-AS1Q9NZ38 188 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 PILRBQ9UKJ0 227 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 CREBBPQ92793 2442 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 TRBV24-1A0A075B6N3 115 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 NPIPB13A6NJU9 1138 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 H2BFSP57053 126 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 FUT5Q11128 374 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 MRPL20Q9BYC9 149 aaKnown RBP6.11□□□□□ -1.43
COLCA1-205ENST00000620864 SIRT4Q9Y6E7 314 aaPredicted RBP6.11□□□□□ -1.43
COLCA1-205ENST00000620864 LY6EQ16553 131 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 NEUROG3Q9Y4Z2 214 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 SELENOKQ9Y6D0 94 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 SCN3AQ9NY46 2000 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 SCN2AQ99250 2005 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 IGHV5-10-1A0A0J9YXX1 117 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 LIFP15018 202 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 MALP21145 153 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 PRSS53Q2L4Q9 553 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 DTX2Q86UW9 622 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 COQ2Q96H96 371 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 OTORQ9NRC9 128 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 TCF19Q9Y242 345 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 IGHV5-51A0A0C4DH38 117 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 NPIPB11E5RHQ5 1161 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 EAF1Q96JC9 268 aaPredicted RBP6.11□□□□□ -1.43
COLCA1-205ENST00000620864 COL11A2P13942 1736 aaPredicted RBP6.11□□□□□ -1.43
COLCA1-205ENST00000620864 SMCHD1A6NHR9 2005 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 IGKV3OR2-268A0A0C4DH90 116 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 NBEAP1P0C6P0 100 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 IL11P20809 199 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 IFITM3Q01628 133 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 TGIF1Q15583 401 aa6.11□□□□□ -1.43
COLCA1-205ENST00000620864 CHTOPQ9Y3Y2 248 aaKnown RBP6.11□□□□□ -1.43
COLCA1-205ENST00000620864 DDX60LQ5H9U9 1706 aaKnown RBP6.1□□□□□ -1.43
COLCA1-205ENST00000620864 H3BMM0 161 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 NDUFA3O95167 84 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 WDR82Q6UXN9 313 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 LINC00305Q7Z4B0 112 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 SRSF8Q9BRL6 282 aaKnown RBP6.1□□□□□ -1.43
COLCA1-205ENST00000620864 SEMA5BQ9P283 1151 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 H3BTX0 84 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 PSCAO43653 123 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 ZP1P60852 638 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 HIST1H4AP62805 103 aaKnown RBP6.1□□□□□ -1.43
COLCA1-205ENST00000620864 MESP2Q0VG99 397 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 CXorf66Q5JRM2 361 aaPredicted RBP6.1□□□□□ -1.43
COLCA1-205ENST00000620864 OSR1Q8TAX0 266 aaPredicted RBP6.1□□□□□ -1.43
COLCA1-205ENST00000620864 CD5LO43866 347 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 UNC119Q13432 240 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 TMEM155Q4W5P6 130 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 C2orf82Q6UX34 121 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 C18orf15Q96N68 181 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 CEP290O15078 2479 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 MAGEA5P43359 124 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 SLC50A1Q9BRV3 221 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 KLHDC2Q9Y2U9 406 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 HIGD1CA8MV81 97 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 HIST1H2BKO60814 126 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 DXOO77932 396 aaKnown RBP6.1□□□□□ -1.43
COLCA1-205ENST00000620864 TRACP01848 142 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 HIST1H2BJP06899 126 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 HIST1H2BOP23527 126 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 HIST1H2BBP33778 126 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 HIST1H2BDP58876 126 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 HIST1H2BCP62807 126 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 HIST2H2BEQ16778 126 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.1□□□□□ -1.43
COLCA1-205ENST00000620864 DCAF10Q5QP82 559 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 UTF1Q5T230 341 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 ZNF818PQ6ZRF7 136 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 HIST1H2BHQ93079 126 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 HIST1H2BNQ99877 126 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 HIST1H2BMQ99879 126 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 EPDR1Q9UM22 224 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 UPK2O00526 184 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 SPINT1O43278 529 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 LHBP01229 141 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 CISD3P0C7P0 127 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 ZNF708P17019 499 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 UCP1P25874 307 aa6.1□□□□□ -1.43
COLCA1-205ENST00000620864 HEPN1Q6WQI6 88 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms