RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 STAB1Q9NY15 2570 aa17.33■□□□□ 0.37
SGMS1-210ENST00000619438 COLCA2A8K830 154 aa17.33■□□□□ 0.37
SGMS1-210ENST00000619438 NDUFS6O75380 124 aaKnown RBP17.33■□□□□ 0.37
SGMS1-210ENST00000619438 BCL2P10415 239 aa17.33■□□□□ 0.37
SGMS1-210ENST00000619438 SPINK9Q5DT21 86 aa17.33■□□□□ 0.37
SGMS1-210ENST00000619438 TMEM200BQ69YZ2 307 aa17.33■□□□□ 0.37
SGMS1-210ENST00000619438 OR4A47Q6IF82 309 aa17.33■□□□□ 0.37
SGMS1-210ENST00000619438 FAM122CQ6P4D5 195 aa17.33■□□□□ 0.37
SGMS1-210ENST00000619438 VKORC1L1Q8N0U8 176 aa17.33■□□□□ 0.37
SGMS1-210ENST00000619438 RPP25LQ8N5L8 163 aaKnown RBP17.33■□□□□ 0.37
SGMS1-210ENST00000619438 ZNF596Q8TC21 504 aa17.33■□□□□ 0.37
SGMS1-210ENST00000619438 NPCDR1Q9BY65 106 aa17.33■□□□□ 0.37
SGMS1-210ENST00000619438 RPS10P5Q9NQ39 176 aa17.33■□□□□ 0.37
SGMS1-210ENST00000619438 TRAV3A0A0B4J244 114 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 MAP1LC3B2A6NCE7 125 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 C17orf112F2Z3M2 114 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 MPDU1O75352 247 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 CT45A6P0DMU7 189 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 CT45A5P0DMU8 189 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 CT45A7P0DMV0 189 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 GNG10P50151 68 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 HILS1P60008 231 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 HSPE1P61604 102 aaKnown RBP17.32■□□□□ 0.36
SGMS1-210ENST00000619438 RTL8BQ17RB0 113 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 ACSM6Q6P461 480 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 BRD3OSQ6XYD6 125 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 SSX7Q7RTT5 188 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 ZNF709Q8N972 641 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 RXFP4Q8TDU9 374 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 LHX4Q969G2 390 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 P2RX4Q99571 388 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 MAP1LC3BQ9GZQ8 125 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 HEYLQ9NQ87 328 aaPredicted RBP17.32■□□□□ 0.36
SGMS1-210ENST00000619438 PRSS46E5RG02 174 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 M0R036 132 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 IFNA1P01562 189 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 SNRNP70P08621 437 aaKnown RBP17.32■□□□□ 0.36
SGMS1-210ENST00000619438 FAM71F2Q6NXP2 309 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 LCN15Q6UWW0 184 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 LINC00311Q8N616 119 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 SIGLECL1Q8N7X8 197 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 TBX15Q96SF7 602 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 SIRPDQ9H106 197 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 SLC39A9Q9NUM3 307 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 GNG13Q9P2W3 67 aa17.32■□□□□ 0.36
SGMS1-210ENST00000619438 CTXND1A0A1B0GTU2 59 aa17.31■□□□□ 0.36
SGMS1-210ENST00000619438 IGKV1D-33P01593 117 aa17.31■□□□□ 0.36
SGMS1-210ENST00000619438 IGKV1-33P01594 117 aa17.31■□□□□ 0.36
SGMS1-210ENST00000619438 FOLR2P14207 255 aa17.31■□□□□ 0.36
SGMS1-210ENST00000619438 CD1BP29016 333 aa17.31■□□□□ 0.36
SGMS1-210ENST00000619438 TAGLN2P37802 199 aaKnown RBP17.31■□□□□ 0.36
SGMS1-210ENST00000619438 ELLP55199 621 aaPredicted RBP17.31■□□□□ 0.36
SGMS1-210ENST00000619438 BPIFB3P59826 476 aa17.31■□□□□ 0.36
SGMS1-210ENST00000619438 DLK1P80370 383 aa17.31■□□□□ 0.36
SGMS1-210ENST00000619438 C8orf46Q8TAG6 207 aa17.31■□□□□ 0.36
SGMS1-210ENST00000619438 C19orf24Q9BVV8 132 aa17.31■□□□□ 0.36
SGMS1-210ENST00000619438 PRNDQ9UKY0 176 aa17.31■□□□□ 0.36
SGMS1-210ENST00000619438 ZNF257Q9Y2Q1 563 aa17.31■□□□□ 0.36
SGMS1-210ENST00000619438 CENPVL3A0A0U1RRI6 287 aa17.3■□□□□ 0.36
SGMS1-210ENST00000619438 IFNA10P01566 189 aa17.3■□□□□ 0.36
SGMS1-210ENST00000619438 ETV3LQ6ZN32 361 aa17.3■□□□□ 0.36
SGMS1-210ENST00000619438 VMO1Q7Z5L0 202 aa17.3■□□□□ 0.36
SGMS1-210ENST00000619438 CYB561D1Q8N8Q1 229 aa17.3■□□□□ 0.36
SGMS1-210ENST00000619438 SLC35D1Q9NTN3 355 aa17.3■□□□□ 0.36
SGMS1-210ENST00000619438 VAX2Q9UIW0 290 aa17.3■□□□□ 0.36
SGMS1-210ENST00000619438 TRBV23-1A0A0A0MS06 115 aa17.29■□□□□ 0.36
SGMS1-210ENST00000619438 H3BQ15 152 aa17.29■□□□□ 0.36
SGMS1-210ENST00000619438 RAB11AP62491 216 aa17.29■□□□□ 0.36
SGMS1-210ENST00000619438 Q8N7P7 452 aa17.29■□□□□ 0.36
SGMS1-210ENST00000619438 SIRT7Q9NRC8 400 aa17.29■□□□□ 0.36
SGMS1-210ENST00000619438 SOX21Q9Y651 276 aaPredicted RBP17.29■□□□□ 0.36
SGMS1-210ENST00000619438 A0A087X0M5 115 aa17.29■□□□□ 0.36
SGMS1-210ENST00000619438 A0A1B0GX30 115 aa17.29■□□□□ 0.36
SGMS1-210ENST00000619438 A0A1W2PPH5 198 aa17.29■□□□□ 0.36
SGMS1-210ENST00000619438 HOXA1P49639 335 aaPredicted RBP17.29■□□□□ 0.36
SGMS1-210ENST00000619438 FFAR4Q5NUL3 377 aa17.29■□□□□ 0.36
SGMS1-210ENST00000619438 SLC35E3Q7Z769 313 aa17.29■□□□□ 0.36
SGMS1-210ENST00000619438 KIR3DL3Q8N743 410 aa17.29■□□□□ 0.36
SGMS1-210ENST00000619438 OR10G9Q8NGN4 311 aa17.29■□□□□ 0.36
SGMS1-210ENST00000619438 OR10G7Q8NGN6 311 aa17.29■□□□□ 0.36
SGMS1-210ENST00000619438 OR13D1Q8NGV5 346 aa17.29■□□□□ 0.36
SGMS1-210ENST00000619438 SPATA3Q8NHX4 192 aa17.29■□□□□ 0.36
SGMS1-210ENST00000619438 ACTR3CQ9C0K3 210 aaPredicted RBP17.29■□□□□ 0.36
SGMS1-210ENST00000619438 A0A087WWC5 75 aa17.28■□□□□ 0.36
SGMS1-210ENST00000619438 UPK2O00526 184 aa17.28■□□□□ 0.36
SGMS1-210ENST00000619438 RRHO14718 337 aa17.28■□□□□ 0.36
SGMS1-210ENST00000619438 CCL3L1P16619 93 aa17.28■□□□□ 0.36
SGMS1-210ENST00000619438 CTRB1P17538 263 aa17.28■□□□□ 0.36
SGMS1-210ENST00000619438 DLX6P56179 175 aa17.28■□□□□ 0.36
SGMS1-210ENST00000619438 ATP5IP56385 69 aaPredicted RBP17.28■□□□□ 0.36
SGMS1-210ENST00000619438 RNF212Q495C1 297 aa17.28■□□□□ 0.36
SGMS1-210ENST00000619438 RUSC1-AS1Q66K80 236 aa17.28■□□□□ 0.36
SGMS1-210ENST00000619438 CTRB2Q6GPI1 263 aa17.28■□□□□ 0.36
SGMS1-210ENST00000619438 C9orf139Q6ZV77 190 aa17.28■□□□□ 0.36
SGMS1-210ENST00000619438 OSR1Q8TAX0 266 aaPredicted RBP17.28■□□□□ 0.36
SGMS1-210ENST00000619438 TMEM170AQ8WVE7 144 aa17.28■□□□□ 0.36
SGMS1-210ENST00000619438 BET1LQ9NYM9 111 aa17.28■□□□□ 0.36
SGMS1-210ENST00000619438 PUS1Q9Y606 427 aaKnown RBP eCLIP17.28■□□□□ 0.36
SGMS1-210ENST00000619438 MT-ND4LP03901 98 aa17.27■□□□□ 0.36
SGMS1-210ENST00000619438 FGF8P55075 233 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms