RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 E7EUB6 86 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 GTF2A1P52655 376 aaPredicted RBP3.22□□□□□ -1.89
SNCA-213ENST00000618500 TCF24Q7RTU0 167 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 SPATA24Q86W54 205 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 OR1P1Q8NH06 330 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 APH1BQ8WW43 257 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 LSM10Q969L4 123 aaKnown RBP3.22□□□□□ -1.89
SNCA-213ENST00000618500 CMSS1Q9BQ75 279 aaKnown RBP3.22□□□□□ -1.89
SNCA-213ENST00000618500 PTTG2Q9NZH5 202 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 ZNF561-AS1K7EIQ3 104 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 K7EP13 123 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 MFNGO00587 321 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 SLC17A2O00624 439 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 EIF4EP06730 217 aaKnown RBP3.21□□□□□ -1.9
SNCA-213ENST00000618500 DEFA4P12838 97 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 TSPOP30536 169 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 ETV1P50549 477 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 B2MP61769 119 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 NUTF2P61970 127 aaKnown RBP3.21□□□□□ -1.9
SNCA-213ENST00000618500 GSG1LQ6UXU4 331 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 DCANP1Q8TF63 244 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 C17orf77Q96MU5 243 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 CHRDL1Q9BU40 450 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 NDUFA4L2Q9NRX3 87 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 OR2W1Q9Y3N9 320 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 TNCP24821 2201 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 I3L2K1 104 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 IGHV3-23P01764 117 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 UCHL1P09936 223 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 TRAPPC2P0DI81 140 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 TRAPPC2BP0DI82 140 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 GNB3P16520 340 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 CRYBB3P26998 211 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 NKX2-1P43699 371 aaPredicted RBP3.21□□□□□ -1.9
SNCA-213ENST00000618500 EIF2B2P49770 351 aaKnown RBP3.21□□□□□ -1.9
SNCA-213ENST00000618500 RORCP51449 518 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 MFAP4P55083 255 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 TMEM50BP56557 158 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 BRWD1-AS2P59051 145 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 DEFB131AP59861 70 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 KRTAP10-2P60368 255 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 ASAH1Q13510 395 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 ODF1Q14990 250 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 TRAM1Q15629 374 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 SAMD13Q5VXD3 122 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 C16orf54Q6UWD8 224 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 MS4A15Q8N5U1 240 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 SETD6Q8TBK2 473 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 PLEKHA2Q9HB19 425 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 FKBP11Q9NYL4 201 aa3.21□□□□□ -1.9
SNCA-213ENST00000618500 MRPS16Q9Y3D3 137 aaKnown RBP3.21□□□□□ -1.9
SNCA-213ENST00000618500 EFCAB10A6NFE3 127 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 DEFB4AO15263 64 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 HPRT1P00492 218 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 HLA-DRB4P13762 266 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 NUP62P37198 522 aaPredicted RBP3.2□□□□□ -1.9
SNCA-213ENST00000618500 ZNF124Q15973 351 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 XAF1Q6GPH4 301 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 TMEM88Q6PEY1 159 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 ZNF600Q6ZNG1 722 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 NTN5Q8WTR8 489 aaPredicted RBP3.2□□□□□ -1.9
SNCA-213ENST00000618500 BORCS5Q969J3 196 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 AP4S1Q9Y587 144 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 HLA-DRB4X5D2U9 266 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 IGLV2-18A0A075B6J9 118 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 HELTA6NFD8 242 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 OR2T8A6NH00 312 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 NUPL2O15504 423 aaKnown RBP3.2□□□□□ -1.9
SNCA-213ENST00000618500 SOCS1O15524 211 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 ATP8B1O43520 1251 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 FCGR3BO75015 233 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 CD3GP09693 182 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 POLR2IP36954 125 aaKnown RBP3.2□□□□□ -1.9
SNCA-213ENST00000618500 PLAC9Q5JTB6 97 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 Q6ZSN1 163 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 CBR4Q8N4T8 237 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 OR1L8Q8NGR8 309 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 SCARB1Q8WTV0 552 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 HDHD3Q9BSH5 251 aaPredicted RBP3.2□□□□□ -1.9
SNCA-213ENST00000618500 RAB22AQ9UL26 194 aa3.2□□□□□ -1.9
SNCA-213ENST00000618500 LALBAP00709 142 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 APELAP0DMC3 54 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 NQO2P16083 231 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 MYL12AP19105 171 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 PSMA1P25786 263 aaKnown RBP3.19□□□□□ -1.9
SNCA-213ENST00000618500 AP2S1P53680 142 aaPredicted RBP3.19□□□□□ -1.9
SNCA-213ENST00000618500 RPL30P62888 115 aaKnown RBP3.19□□□□□ -1.9
SNCA-213ENST00000618500 ICAM4Q14773 271 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 ZNF79Q15937 498 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 CNIH2Q6PI25 160 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 IDO2Q6ZQW0 420 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 ST8SIA2Q92186 375 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 TMEM80Q96HE8 168 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 CYYR1Q96J86 154 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 FKBP14Q9NWM8 211 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 OAZ3Q9UMX2 235 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 H3BMM0 161 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 WBP4O75554 376 aaKnown RBP3.19□□□□□ -1.9
SNCA-213ENST00000618500 SCGB2A1O75556 95 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 SCGNO76038 276 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms