RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 FAM90A26D6RGX4 464 aa17.68■□□□□ 0.42
CBWD3-213ENST00000618217 KIAA0141Q14154 515 aaPredicted RBP17.68■□□□□ 0.42
CBWD3-213ENST00000618217 C12orf54Q6X4T0 127 aa17.68■□□□□ 0.42
CBWD3-213ENST00000618217 LCNL1Q6ZST4 164 aa17.68■□□□□ 0.42
CBWD3-213ENST00000618217 OR2C3Q8N628 320 aa17.68■□□□□ 0.42
CBWD3-213ENST00000618217 ZBTB8BQ8NAP8 495 aaPredicted RBP17.68■□□□□ 0.42
CBWD3-213ENST00000618217 MGAT4CQ9UBM8 478 aa17.68■□□□□ 0.42
CBWD3-213ENST00000618217 H3BUA1 57 aa17.67■□□□□ 0.42
CBWD3-213ENST00000618217 CXCL3P19876 107 aa17.67■□□□□ 0.42
CBWD3-213ENST00000618217 ID3Q02535 119 aa17.67■□□□□ 0.42
CBWD3-213ENST00000618217 HIST2H2BDQ6DRA6 164 aa17.67■□□□□ 0.42
CBWD3-213ENST00000618217 C11orf44Q8N8P7 122 aa17.67■□□□□ 0.42
CBWD3-213ENST00000618217 OR4X2Q8NGF9 303 aa17.67■□□□□ 0.42
CBWD3-213ENST00000618217 DMRT1Q9Y5R6 373 aa17.67■□□□□ 0.42
CBWD3-213ENST00000618217 PRH1P02810 166 aa17.66■□□□□ 0.42
CBWD3-213ENST00000618217 RPLP1P05386 114 aaKnown RBP17.66■□□□□ 0.42
CBWD3-213ENST00000618217 RAB9AP51151 201 aa17.66■□□□□ 0.42
CBWD3-213ENST00000618217 IL15RAQ13261 267 aa17.66■□□□□ 0.42
CBWD3-213ENST00000618217 C2orf50Q96LR7 162 aa17.66■□□□□ 0.42
CBWD3-213ENST00000618217 FANCD2OSQ96PS1 177 aa17.66■□□□□ 0.42
CBWD3-213ENST00000618217 RBKSQ9H477 322 aa17.66■□□□□ 0.42
CBWD3-213ENST00000618217 TRBV9A0A0B4J1U6 114 aa17.65■□□□□ 0.42
CBWD3-213ENST00000618217 C5orf51A6NDU8 294 aa17.65■□□□□ 0.42
CBWD3-213ENST00000618217 FAM25EA8MYX2 175 aa17.65■□□□□ 0.42
CBWD3-213ENST00000618217 PF4V1P10720 104 aa17.65■□□□□ 0.42
CBWD3-213ENST00000618217 EIF2B2P49770 351 aaKnown RBP17.65■□□□□ 0.42
CBWD3-213ENST00000618217 C11orf87Q6NUJ2 197 aa17.65■□□□□ 0.42
CBWD3-213ENST00000618217 GSG1LQ6UXU4 331 aa17.65■□□□□ 0.42
CBWD3-213ENST00000618217 C3orf56Q8N813 242 aa17.65■□□□□ 0.42
CBWD3-213ENST00000618217 MS4A10Q96PG2 267 aa17.65■□□□□ 0.42
CBWD3-213ENST00000618217 CITED2Q99967 270 aaPredicted RBP17.65■□□□□ 0.42
CBWD3-213ENST00000618217 GOSR2O14653 212 aa17.65■□□□□ 0.42
CBWD3-213ENST00000618217 SIX6O95475 246 aa17.65■□□□□ 0.42
CBWD3-213ENST00000618217 HOXA1P49639 335 aaPredicted RBP17.65■□□□□ 0.42
CBWD3-213ENST00000618217 MFAP2P55001 183 aa17.65■□□□□ 0.42
CBWD3-213ENST00000618217 H2BFSP57053 126 aa17.65■□□□□ 0.42
CBWD3-213ENST00000618217 BSXQ3C1V8 233 aa17.65■□□□□ 0.42
CBWD3-213ENST00000618217 MRPL41Q8IXM3 137 aaKnown RBP17.65■□□□□ 0.42
CBWD3-213ENST00000618217 ZNF114Q8NC26 417 aa17.65■□□□□ 0.42
CBWD3-213ENST00000618217 P2RX4Q99571 388 aa17.65■□□□□ 0.42
CBWD3-213ENST00000618217 SLA2Q9H6Q3 261 aa17.65■□□□□ 0.42
CBWD3-213ENST00000618217 GSKIPQ9P0R6 139 aa17.65■□□□□ 0.42
CBWD3-213ENST00000618217 F11RQ9Y624 299 aaKnown RBP17.65■□□□□ 0.42
CBWD3-213ENST00000618217 CEBPZOSA8MTT3 80 aa17.64■□□□□ 0.41
CBWD3-213ENST00000618217 ERHP84090 104 aaKnown RBP17.64■□□□□ 0.41
CBWD3-213ENST00000618217 TMEM65Q6PI78 240 aa17.64■□□□□ 0.41
CBWD3-213ENST00000618217 TCTE3Q8IZS6 198 aa17.64■□□□□ 0.41
CBWD3-213ENST00000618217 MAGT1Q9H0U3 335 aa17.64■□□□□ 0.41
CBWD3-213ENST00000618217 ZNF355PQ9NSJ1 428 aa17.64■□□□□ 0.41
CBWD3-213ENST00000618217 IGLV11-55A0A075B6I3 123 aa17.63■□□□□ 0.41
CBWD3-213ENST00000618217 ADARB2-AS1A8MUL3 147 aa17.63■□□□□ 0.41
CBWD3-213ENST00000618217 NKX2-1P43699 371 aaPredicted RBP17.63■□□□□ 0.41
CBWD3-213ENST00000618217 ZFP69Q49AA0 526 aa17.63■□□□□ 0.41
CBWD3-213ENST00000618217 DTD1Q8TEA8 209 aa17.63■□□□□ 0.41
CBWD3-213ENST00000618217 ENY2Q9NPA8 101 aa17.63■□□□□ 0.41
CBWD3-213ENST00000618217 SYNGR2O43760 224 aa17.62■□□□□ 0.41
CBWD3-213ENST00000618217 MBPP02686 304 aaPredicted RBP17.62■□□□□ 0.41
CBWD3-213ENST00000618217 TRGV3P03979 118 aa17.62■□□□□ 0.41
CBWD3-213ENST00000618217 PVRIGQ6DKI7 326 aa17.62■□□□□ 0.41
CBWD3-213ENST00000618217 ZNF491Q8N8L2 437 aa17.62■□□□□ 0.41
CBWD3-213ENST00000618217 OR1P1Q8NH06 330 aa17.62■□□□□ 0.41
CBWD3-213ENST00000618217 ZNF436Q9C0F3 470 aaPredicted RBP17.62■□□□□ 0.41
CBWD3-213ENST00000618217 HEYLQ9NQ87 328 aaPredicted RBP17.62■□□□□ 0.41
CBWD3-213ENST00000618217 TCRBV4S1A1TA0A5B7 111 aa17.61■□□□□ 0.41
CBWD3-213ENST00000618217 MED6O75586 246 aa17.61■□□□□ 0.41
CBWD3-213ENST00000618217 RNASE2P10153 161 aaKnown RBP17.61■□□□□ 0.41
CBWD3-213ENST00000618217 DEFA4P12838 97 aa17.61■□□□□ 0.41
CBWD3-213ENST00000618217 ZFP57Q9NU63 452 aa17.61■□□□□ 0.41
CBWD3-213ENST00000618217 CDX1P47902 265 aaPredicted RBP17.61■□□□□ 0.41
CBWD3-213ENST00000618217 TPPP2P59282 170 aa17.61■□□□□ 0.41
CBWD3-213ENST00000618217 POLR2GP62487 172 aaKnown RBP eCLIP17.61■□□□□ 0.41
CBWD3-213ENST00000618217 RHOGP84095 191 aa17.61■□□□□ 0.41
CBWD3-213ENST00000618217 NECAP1Q8NC96 275 aa17.61■□□□□ 0.41
CBWD3-213ENST00000618217 TMEM170AQ8WVE7 144 aa17.61■□□□□ 0.41
CBWD3-213ENST00000618217 WDR89Q96FK6 387 aaPredicted RBP17.61■□□□□ 0.41
CBWD3-213ENST00000618217 UBE2E2Q96LR5 201 aa17.61■□□□□ 0.41
CBWD3-213ENST00000618217 TSSC4Q9Y5U2 329 aaPredicted RBP17.61■□□□□ 0.41
CBWD3-213ENST00000618217 SMLR1H3BR10 107 aa17.6■□□□□ 0.41
CBWD3-213ENST00000618217 HIST1H1BP16401 226 aaKnown RBP17.6■□□□□ 0.41
CBWD3-213ENST00000618217 SNCAP37840 140 aa17.6■□□□□ 0.41
CBWD3-213ENST00000618217 RPL23AP62750 156 aaKnown RBP17.6■□□□□ 0.41
CBWD3-213ENST00000618217 DEFA5Q01523 94 aa17.6■□□□□ 0.41
CBWD3-213ENST00000618217 SHISA2Q6UWI4 295 aa17.6■□□□□ 0.41
CBWD3-213ENST00000618217 HIPK2Q9H2X6 1198 aa17.6■□□□□ 0.41
CBWD3-213ENST00000618217 RCL1Q9Y2P8 373 aaKnown RBP17.6■□□□□ 0.41
CBWD3-213ENST00000618217 OR2J3O76001 311 aa17.59■□□□□ 0.41
CBWD3-213ENST00000618217 TMEM50AO95807 157 aa17.59■□□□□ 0.41
CBWD3-213ENST00000618217 HTR2BP41595 481 aa17.59■□□□□ 0.41
CBWD3-213ENST00000618217 OR1L6Q8NGR2 347 aa17.59■□□□□ 0.41
CBWD3-213ENST00000618217 NMES1Q9C002 83 aa17.59■□□□□ 0.41
CBWD3-213ENST00000618217 FAM223BA6NKX1 122 aa17.58■□□□□ 0.41
CBWD3-213ENST00000618217 NDUFB8O95169 186 aa17.58■□□□□ 0.41
CBWD3-213ENST00000618217 SLC25A24Q6NUK1 477 aa17.58■□□□□ 0.41
CBWD3-213ENST00000618217 C18orf65Q6ZTR6 163 aa17.58■□□□□ 0.41
CBWD3-213ENST00000618217 NDUFA11Q86Y39 141 aa17.58■□□□□ 0.41
CBWD3-213ENST00000618217 FAM223AQ8IWN6 122 aa17.58■□□□□ 0.41
CBWD3-213ENST00000618217 USMG5Q96IX5 58 aa17.58■□□□□ 0.41
CBWD3-213ENST00000618217 FBXL7Q9UJT9 491 aa17.58■□□□□ 0.41
CBWD3-213ENST00000618217 SCGB1D2O95969 90 aa17.58■□□□□ 0.4
CBWD3-213ENST00000618217 GIPP09681 153 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms