RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	GALR1	P47211	349 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	CDX1	P47902	265 aa	Predicted RBP	11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	ARF6	P62330	175 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	C5orf64	Q2M2E5	130 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	CYP2G1P	Q6ZSU1	146 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	FAM222B	Q8WU58	562 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	GAFA1	Q96PS6	74 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	ENY2	Q9NPA8	101 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	PXMP4	Q9Y6I8	212 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	NDUFB4	O95168	129 aa		11.4	□□□□□ -0.58
CACNA1C-231	ENST00000616390	IGKV1-16	P04430	117 aa		11.4	□□□□□ -0.58
CACNA1C-231	ENST00000616390	ARL14EPL	P0DKL9	152 aa		11.4	□□□□□ -0.58
CACNA1C-231	ENST00000616390	TNFSF4	P23510	183 aa		11.4	□□□□□ -0.58
CACNA1C-231	ENST00000616390	TIMP3	P35625	211 aa		11.4	□□□□□ -0.58
CACNA1C-231	ENST00000616390	VDAC2	P45880	294 aa	Predicted RBP	11.4	□□□□□ -0.58
CACNA1C-231	ENST00000616390	REG1B	P48304	166 aa		11.4	□□□□□ -0.58
CACNA1C-231	ENST00000616390	SELENOT	P62341	195 aa		11.4	□□□□□ -0.58
CACNA1C-231	ENST00000616390	VWC2	Q2TAL6	325 aa		11.4	□□□□□ -0.58
CACNA1C-231	ENST00000616390	TCF23	Q7RTU1	214 aa		11.4	□□□□□ -0.58
CACNA1C-231	ENST00000616390	OR13D1	Q8NGV5	346 aa		11.4	□□□□□ -0.58
CACNA1C-231	ENST00000616390	NEIL1	Q96FI4	390 aa	Predicted RBP	11.4	□□□□□ -0.58
CACNA1C-231	ENST00000616390	MANBAL	Q9NQG1	85 aa		11.4	□□□□□ -0.58
CACNA1C-231	ENST00000616390	PGPEP1	Q9NXJ5	209 aa		11.4	□□□□□ -0.58
CACNA1C-231	ENST00000616390	SMPX	Q9UHP9	88 aa		11.4	□□□□□ -0.58
CACNA1C-231	ENST00000616390	ACTL6B	O94805	426 aa		11.4	□□□□□ -0.59
CACNA1C-231	ENST00000616390	PPP1R2P9	O14990	202 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	FABP4	P15090	132 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	RAB7A	P51149	207 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	RPL19	P84098	196 aa	Known RBP	11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	MOB3B	Q86TA1	216 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	FAM57A	Q8TBR7	257 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	OR5B12	Q96R08	314 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	SFXN3	Q9BWM7	321 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	ABCA4	P78363	2273 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390		A0A0G2JNJ9	132 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	CA2	P00918	260 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	CGB3	P0DN86	165 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	CGB7	P0DN87	165 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	CCKAR	P32238	428 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	RND2	P52198	227 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	FAM3B	P58499	235 aa	Predicted RBP	11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	PAX5	Q02548	391 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	SPATA31B1P	Q5VZV4	182 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	STUM	Q69YW2	141 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	DDB2	Q92466	427 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	CCL17	Q92583	94 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390		Q9UFV3	132 aa		11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	TBL2	Q9Y4P3	447 aa	Known RBP	11.39	□□□□□ -0.59
CACNA1C-231	ENST00000616390	TMEM250	H0YL14	139 aa		11.38	□□□□□ -0.59
CACNA1C-231	ENST00000616390	CCL3L1	P16619	93 aa		11.38	□□□□□ -0.59
CACNA1C-231	ENST00000616390	CR1L	Q2VPA4	569 aa		11.38	□□□□□ -0.59
CACNA1C-231	ENST00000616390	DOLPP1	Q86YN1	238 aa		11.38	□□□□□ -0.59
CACNA1C-231	ENST00000616390	OR5R1	Q8NH85	324 aa		11.38	□□□□□ -0.59
CACNA1C-231	ENST00000616390	H1FX	Q92522	213 aa	Known RBP	11.38	□□□□□ -0.59
CACNA1C-231	ENST00000616390	GGTLC1	Q9BX51	225 aa		11.38	□□□□□ -0.59
CACNA1C-231	ENST00000616390	TMEM242	Q9NWH2	141 aa		11.38	□□□□□ -0.59
CACNA1C-231	ENST00000616390	NAV3	Q8IVL0	2385 aa		11.38	□□□□□ -0.59
CACNA1C-231	ENST00000616390	OR4A8	P0C604	315 aa		11.38	□□□□□ -0.59
CACNA1C-231	ENST00000616390	NPY1R	P25929	384 aa		11.38	□□□□□ -0.59
CACNA1C-231	ENST00000616390	GNB1	P62873	340 aa		11.38	□□□□□ -0.59
CACNA1C-231	ENST00000616390	MLANA	Q16655	118 aa		11.38	□□□□□ -0.59
CACNA1C-231	ENST00000616390	SMIM12	Q96EX1	92 aa		11.38	□□□□□ -0.59
CACNA1C-231	ENST00000616390	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.38	□□□□□ -0.59
CACNA1C-231	ENST00000616390	IDI2-AS1	Q9NZ38	188 aa		11.38	□□□□□ -0.59
CACNA1C-231	ENST00000616390	OR51B2	Q9Y5P1	312 aa		11.38	□□□□□ -0.59
CACNA1C-231	ENST00000616390	ABCA1	O95477	2261 aa		11.37	□□□□□ -0.59
CACNA1C-231	ENST00000616390	C15orf61	A6NNL5	157 aa		11.37	□□□□□ -0.59
CACNA1C-231	ENST00000616390	PRRG2	O14669	202 aa		11.37	□□□□□ -0.59
CACNA1C-231	ENST00000616390	FOXH1	O75593	365 aa		11.37	□□□□□ -0.59
CACNA1C-231	ENST00000616390	BSPH1	Q075Z2	132 aa		11.37	□□□□□ -0.59
CACNA1C-231	ENST00000616390	LRFN3	Q9BTN0	628 aa		11.37	□□□□□ -0.59
CACNA1C-231	ENST00000616390	CTDSP1	Q9GZU7	261 aa		11.37	□□□□□ -0.59
CACNA1C-231	ENST00000616390	SRRM4	A7MD48	611 aa	Known RBP	11.37	□□□□□ -0.59
CACNA1C-231	ENST00000616390	GATA2	P23769	480 aa	Predicted RBP	11.37	□□□□□ -0.59
CACNA1C-231	ENST00000616390	NPVF	Q9HCQ7	196 aa		11.37	□□□□□ -0.59
CACNA1C-231	ENST00000616390	C20orf202	A1L168	122 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	DPRX	A6NFQ7	191 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	C16orf97	H3BN30	126 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390		J3QR06	171 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	IGFBP2	P18065	325 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	THBS3	P49746	956 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	HSPE1	P61604	102 aa	Known RBP	11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	ZNF788	Q6ZQV5	615 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	ZNF114	Q8NC26	417 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	PRSS33	Q8NF86	280 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	OR4X1	Q8NH49	305 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	TMEM37	Q8WXS4	190 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	DCHS2	Q6V1P9	2916 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	PPP5D1	E7EU14	171 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	PFN1	P07737	140 aa	Known RBP	11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	IL6R	P08887	468 aa	Predicted RBP	11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	GATA4	P43694	442 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	C1orf159	Q96HA4	380 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	SLC25A10	Q9UBX3	287 aa	Predicted RBP	11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	C1QTNF9	P0C862	333 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	CT45A6	P0DMU7	189 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	CT45A5	P0DMU8	189 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	CT45A7	P0DMV0	189 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	OPRK1	P41145	380 aa		11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms