RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 VSIRQ9H7M9 311 aa7.25□□□□□ -1.25
SSX3-204ENST00000612497 PLGRKTQ9HBL7 147 aa7.25□□□□□ -1.25
SSX3-204ENST00000612497 DKK2Q9UBU2 259 aa7.25□□□□□ -1.25
SSX3-204ENST00000612497 KCNK7Q9Y2U2 307 aa7.25□□□□□ -1.25
SSX3-204ENST00000612497 OR2W1Q9Y3N9 320 aa7.25□□□□□ -1.25
SSX3-204ENST00000612497 F11RQ9Y624 299 aaKnown RBP7.25□□□□□ -1.25
SSX3-204ENST00000612497 A0A075B6Q4 140 aa7.24□□□□□ -1.25
SSX3-204ENST00000612497 K7EQG2 157 aa7.24□□□□□ -1.25
SSX3-204ENST00000612497 UPK2O00526 184 aa7.24□□□□□ -1.25
SSX3-204ENST00000612497 ATP8B1O43520 1251 aa7.24□□□□□ -1.25
SSX3-204ENST00000612497 SMR3BP02814 79 aaPredicted RBP7.24□□□□□ -1.25
SSX3-204ENST00000612497 CD37P11049 281 aa7.24□□□□□ -1.25
SSX3-204ENST00000612497 NFYAP23511 347 aaPredicted RBP7.24□□□□□ -1.25
SSX3-204ENST00000612497 TALDO1P37837 337 aa7.24□□□□□ -1.25
SSX3-204ENST00000612497 THOC7Q6I9Y2 204 aaKnown RBP7.24□□□□□ -1.25
SSX3-204ENST00000612497 ZNF773Q6PK81 442 aa7.24□□□□□ -1.25
SSX3-204ENST00000612497 HSD17B13Q7Z5P4 300 aaPredicted RBP7.24□□□□□ -1.25
SSX3-204ENST00000612497 SYT8Q8NBV8 401 aa7.24□□□□□ -1.25
SSX3-204ENST00000612497 CCDC197Q8NCU1 140 aa7.24□□□□□ -1.25
SSX3-204ENST00000612497 RAB3CQ96E17 227 aa7.24□□□□□ -1.25
SSX3-204ENST00000612497 TMEM80Q96HE8 168 aa7.24□□□□□ -1.25
SSX3-204ENST00000612497 GRAMD2BQ96HH9 432 aa7.24□□□□□ -1.25
SSX3-204ENST00000612497 RAB40CQ96S21 281 aa7.24□□□□□ -1.25
SSX3-204ENST00000612497 CENPOQ9BU64 300 aa7.24□□□□□ -1.25
SSX3-204ENST00000612497 HINT2Q9BX68 163 aa7.24□□□□□ -1.25
SSX3-204ENST00000612497 NXF2Q9GZY0 626 aaKnown RBP7.24□□□□□ -1.25
SSX3-204ENST00000612497 IGHV3OR16-12A0A075B7B8 117 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 IGKV1D-8A0A087WSZ0 117 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 IGKV1D-13A0A0B4J2D9 117 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 LOC100130705A0A1B0GUX0 176 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 SMIM9A6NGZ8 99 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 WBP4O75554 376 aaKnown RBP7.23□□□□□ -1.25
SSX3-204ENST00000612497 HLA-DQB1P01920 261 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 CD1AP06126 327 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 IGKV1-13P0DP09 117 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 BTF3P20290 206 aaKnown RBP7.23□□□□□ -1.25
SSX3-204ENST00000612497 FUSP35637 526 aaKnown RBP eCLIP7.23□□□□□ -1.25
SSX3-204ENST00000612497 MFAP4P55083 255 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 CCL18P55774 89 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 EIF4EBP1Q13541 118 aaPredicted RBP7.23□□□□□ -1.25
SSX3-204ENST00000612497 OXA1LQ15070 435 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 RCN1Q15293 331 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 SERTAD4-AS1Q5TG53 156 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 C1orf146Q5VVC0 180 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 TOMM20LQ6UXN7 152 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 GSG1LQ6UXU4 331 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 ZNF705AQ6ZN79 300 aaPredicted RBP7.23□□□□□ -1.25
SSX3-204ENST00000612497 CBR4Q8N4T8 237 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 SLC25A46Q96AG3 418 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 SLC7A6OSQ96CW6 309 aaPredicted RBP7.23□□□□□ -1.25
SSX3-204ENST00000612497 ZNF503Q96F45 646 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 C17orf77Q96MU5 243 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 NEU1Q99519 415 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 TMEM231Q9H6L2 316 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 RFNGQ9Y644 331 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 HMCN2Q8NDA2 5059 aa7.23□□□□□ -1.25
SSX3-204ENST00000612497 TEX50A0A1B0GTY4 177 aa7.22□□□□□ -1.25
SSX3-204ENST00000612497 RPS10-NUDT3A0A1W2PQS6 291 aa7.22□□□□□ -1.25
SSX3-204ENST00000612497 ERICH4A6NGS2 130 aa7.22□□□□□ -1.25
SSX3-204ENST00000612497 ZNF705FA8MVS1 300 aaPredicted RBP7.22□□□□□ -1.25
SSX3-204ENST00000612497 FAM229AH3BQW9 127 aa7.22□□□□□ -1.25
SSX3-204ENST00000612497 TNFSF12O43508 249 aa7.22□□□□□ -1.25
SSX3-204ENST00000612497 DENRO43583 198 aaKnown RBP7.22□□□□□ -1.25
SSX3-204ENST00000612497 GNG7O60262 68 aa7.22□□□□□ -1.25
SSX3-204ENST00000612497 NUDT3O95989 172 aa7.22□□□□□ -1.25
SSX3-204ENST00000612497 ZNF705DP0CH99 300 aaPredicted RBP7.22□□□□□ -1.25
SSX3-204ENST00000612497 ZNF705BP0CI00 300 aaPredicted RBP7.22□□□□□ -1.25
SSX3-204ENST00000612497 FGF9P31371 208 aaPredicted RBP7.22□□□□□ -1.25
SSX3-204ENST00000612497 CLDN12P56749 244 aa7.22□□□□□ -1.25
SSX3-204ENST00000612497 RAB11BQ15907 218 aa7.22□□□□□ -1.25
SSX3-204ENST00000612497 HSD17B12Q53GQ0 312 aa7.22□□□□□ -1.25
SSX3-204ENST00000612497 SPAG16Q8N0X2 631 aa7.22□□□□□ -1.25
SSX3-204ENST00000612497 DMBX1Q8NFW5 382 aa7.22□□□□□ -1.25
SSX3-204ENST00000612497 OR1L8Q8NGR8 309 aa7.22□□□□□ -1.25
SSX3-204ENST00000612497 MISP3Q96FF7 219 aa7.22□□□□□ -1.25
SSX3-204ENST00000612497 TMEM140Q9NV12 185 aa7.22□□□□□ -1.25
SSX3-204ENST00000612497 SLC17A2O00624 439 aa7.21□□□□□ -1.26
SSX3-204ENST00000612497 IGHV3-48P01763 117 aa7.21□□□□□ -1.26
SSX3-204ENST00000612497 NQO2P16083 231 aa7.21□□□□□ -1.26
SSX3-204ENST00000612497 TAS2R31P59538 309 aa7.21□□□□□ -1.26
SSX3-204ENST00000612497 DAD1P61803 113 aa7.21□□□□□ -1.26
SSX3-204ENST00000612497 C2orf76Q3KRA6 126 aa7.21□□□□□ -1.26
SSX3-204ENST00000612497 PSMG4Q5JS54 123 aa7.21□□□□□ -1.26
SSX3-204ENST00000612497 Q6ZSN1 163 aa7.21□□□□□ -1.26
SSX3-204ENST00000612497 LSM10Q969L4 123 aaKnown RBP7.21□□□□□ -1.26
SSX3-204ENST00000612497 TXN2Q99757 166 aa7.21□□□□□ -1.26
SSX3-204ENST00000612497 PGPEP1Q9NXJ5 209 aa7.21□□□□□ -1.26
SSX3-204ENST00000612497 LINC00588Q9Y4M8 146 aa7.21□□□□□ -1.26
SSX3-204ENST00000612497 A0A1W2PS18 150 aa7.2□□□□□ -1.26
SSX3-204ENST00000612497 HELTA6NFD8 242 aa7.2□□□□□ -1.26
SSX3-204ENST00000612497 EFCAB10A6NFE3 127 aa7.2□□□□□ -1.26
SSX3-204ENST00000612497 SULT1C2O00338 296 aa7.2□□□□□ -1.26
SSX3-204ENST00000612497 MYL12BO14950 172 aa7.2□□□□□ -1.26
SSX3-204ENST00000612497 CTXN2P0C2S0 81 aa7.2□□□□□ -1.26
SSX3-204ENST00000612497 NPPCP23582 126 aa7.2□□□□□ -1.26
SSX3-204ENST00000612497 GADD45AP24522 165 aa7.2□□□□□ -1.26
SSX3-204ENST00000612497 ST3GAL4Q11206 333 aa7.2□□□□□ -1.26
SSX3-204ENST00000612497 TTC32Q5I0X7 151 aa7.2□□□□□ -1.26
SSX3-204ENST00000612497 Q6ZS49 121 aa7.2□□□□□ -1.26
SSX3-204ENST00000612497 MS4A15Q8N5U1 240 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms