RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 COQ4Q9Y3A0 265 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 PXMP4Q9Y6I8 212 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 ADAMTSL1Q8N6G6 1762 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 ADGBQ8N7X0 1667 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 ERICH3Q5RHP9 1530 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 OVOS2A0A0G2JMS6 1433 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 TMEM2Q9UHN6 1383 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 IGHV3OR16-8A0A075B7F1 116 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 TRAV38-1A0A0B4J264 116 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 A0A0X1KG70 313 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 C20orf202A1L168 122 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 RIIAD1A6NNX1 92 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 OVOL1O14753 267 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 APOMO95445 188 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 LHBP01229 141 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 HIST1H1BP16401 226 aaKnown RBP2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 NTF3P20783 257 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 OR10J1P30954 320 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 CCR2P41597 374 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 LPAR6P43657 344 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 PSMB3P49720 205 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 AKR1D1P51857 326 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 CCL23P55773 120 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 MP68P56378 58 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 LINC00313P59037 77 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 PPP1CAP62136 330 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 NCS1P62166 190 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 RPS25P62851 125 aaKnown RBP2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 PPP3R1P63098 170 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 HBA1P69905 142 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 MRPS10P82664 201 aaKnown RBP2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 SLC38A11Q08AI6 406 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 BIKQ13323 160 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 HES3Q5TGS1 186 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 AMMECR1LQ6DCA0 310 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 HRCT1Q6UXD1 115 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 TSTD1Q8NFU3 115 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 OR4E2Q8NGC2 313 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 OR52R1Q8NGF1 315 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 FNDC9Q8TBE3 224 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 LINC01587Q99440 93 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 OR8D2Q9GZM6 311 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 LPAR5Q9H1C0 372 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 PARP11Q9NR21 331 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 DNAJC12Q9UKB3 198 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 TRAPPC2LQ9UL33 140 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 HECW1Q76N89 1606 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 ZFYVE16Q7Z3T8 1539 aa2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 MAGI1Q96QZ7 1491 aaPredicted RBP2.26□□□□□ -2.05
SMCHD1-213ENST00000609587 TROQ12816 1431 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 SPATA31E1Q6ZUB1 1445 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 OTOFQ9HC10 1997 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 COL27A1Q8IZC6 1860 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 ZNF106Q9H2Y7 1883 aaKnown RBP2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 hCG_1818297A0A087WSY0 165 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 TRAV8-1A0A0A6YYK1 113 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 LOC100130705A0A1B0GUX0 176 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 IZUMO1RA6ND01 250 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 CD300LBA8K4G0 201 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 A8MT66 165 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 OR2H2O95918 312 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 CXorf1O96002 111 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 IGLV3-27P01718 113 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 OR4Q2P0C623 313 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 SMIM10L2AP0DMW4 78 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 SMIM10L2BP0DMW5 78 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 OR12D1P0DN82 309 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 RNASE2P10153 161 aaKnown RBP2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 CD28P10747 220 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 FKBP2P26885 142 aaKnown RBP2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 IL3RAP26951 378 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 CMPK1P30085 196 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 PPP1CCP36873 323 aaKnown RBP2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 MPV17P39210 176 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 GABRA2P47869 451 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 INPP1P49441 399 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 GNA12Q03113 381 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 DHRS2Q13268 280 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 NEDD8Q15843 81 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 SCGB2B2Q4G0G5 96 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 ZNF773Q6PK81 442 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 SPINT4Q6UDR6 99 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 ATP5L2Q7Z4Y8 100 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 SLC25A29Q8N8R3 303 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 OR10D4PQ8NGN7 298 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 KLF14Q8TD94 323 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 MBD3L1Q8WWY6 194 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 CMBLQ96DG6 245 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 TP53RKQ96S44 253 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 MGLLQ99685 303 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 PRADC1Q9BSG0 188 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 THTPAQ9BU02 230 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 RTL8AQ9BWD3 113 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 KCNIP2Q9NS61 270 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 POMPQ9Y244 141 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 CYSLTR1Q9Y271 337 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 FIS1Q9Y3D6 152 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 AMMECR1Q9Y4X0 333 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 GRIN2AQ12879 1464 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms