RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 ENY2Q9NPA8 101 aa11.06□□□□□ -0.64
CTSA-219ENST00000607841 NUDT15Q9NV35 164 aa11.06□□□□□ -0.64
CTSA-219ENST00000607841 TMED3Q9Y3Q3 217 aa11.06□□□□□ -0.64
CTSA-219ENST00000607841 TRAV6A0A075B6T7 132 aa11.05□□□□□ -0.64
CTSA-219ENST00000607841 A0A1B0GU03 582 aa11.05□□□□□ -0.64
CTSA-219ENST00000607841 OR2J3O76001 311 aa11.05□□□□□ -0.64
CTSA-219ENST00000607841 DUS4LO95620 317 aaKnown RBP11.05□□□□□ -0.64
CTSA-219ENST00000607841 H2AFB2P0C5Z0 115 aa11.05□□□□□ -0.64
CTSA-219ENST00000607841 SPCS3P61009 180 aa11.05□□□□□ -0.64
CTSA-219ENST00000607841 ZNF616Q08AN1 781 aa11.05□□□□□ -0.64
CTSA-219ENST00000607841 SMCO1Q147U7 214 aa11.05□□□□□ -0.64
CTSA-219ENST00000607841 KLK9Q2XQG4 91 aa11.05□□□□□ -0.64
CTSA-219ENST00000607841 DEFB136Q30KP8 78 aa11.05□□□□□ -0.64
CTSA-219ENST00000607841 AARDQ4LEZ3 155 aa11.05□□□□□ -0.64
CTSA-219ENST00000607841 NMSQ5H8A3 153 aa11.05□□□□□ -0.64
CTSA-219ENST00000607841 FANCD2OSQ96PS1 177 aa11.05□□□□□ -0.64
CTSA-219ENST00000607841 P2RX4Q99571 388 aa11.05□□□□□ -0.64
CTSA-219ENST00000607841 FBXL7Q9UJT9 491 aa11.05□□□□□ -0.64
CTSA-219ENST00000607841 KLK9Q9UKQ9 250 aa11.05□□□□□ -0.64
CTSA-219ENST00000607841 NBEAL1Q6ZS30 2694 aa11.05□□□□□ -0.64
CTSA-219ENST00000607841 PLXNB1O43157 2135 aa11.05□□□□□ -0.64
CTSA-219ENST00000607841 IGLV11-55A0A075B6I3 123 aa11.04□□□□□ -0.64
CTSA-219ENST00000607841 INS-IGF2F8WCM5 200 aa11.04□□□□□ -0.64
CTSA-219ENST00000607841 HSPB1P04792 205 aaKnown RBP11.04□□□□□ -0.64
CTSA-219ENST00000607841 OR8U8P0C7N1 319 aa11.04□□□□□ -0.64
CTSA-219ENST00000607841 CD33P20138 364 aa11.04□□□□□ -0.64
CTSA-219ENST00000607841 SNCAP37840 140 aa11.04□□□□□ -0.64
CTSA-219ENST00000607841 HOXA1P49639 335 aaPredicted RBP11.04□□□□□ -0.64
CTSA-219ENST00000607841 C15orf32Q32M92 178 aa11.04□□□□□ -0.64
CTSA-219ENST00000607841 PDLIM3Q53GG5 364 aaPredicted RBP11.04□□□□□ -0.64
CTSA-219ENST00000607841 SLC25A24Q6NUK1 477 aa11.04□□□□□ -0.64
CTSA-219ENST00000607841 ZNF343Q6P1L6 599 aa11.04□□□□□ -0.64
CTSA-219ENST00000607841 ETV3LQ6ZN32 361 aa11.04□□□□□ -0.64
CTSA-219ENST00000607841 OR2C3Q8N628 320 aa11.04□□□□□ -0.64
CTSA-219ENST00000607841 WFDC9Q8NEX5 89 aa11.04□□□□□ -0.64
CTSA-219ENST00000607841 CXorf58Q96LI9 332 aa11.04□□□□□ -0.64
CTSA-219ENST00000607841 DUX3Q96PT4 197 aa11.04□□□□□ -0.64
CTSA-219ENST00000607841 RANGRFQ9HD47 186 aaPredicted RBP11.04□□□□□ -0.64
CTSA-219ENST00000607841 F11RQ9Y624 299 aaKnown RBP11.04□□□□□ -0.64
CTSA-219ENST00000607841 TRRAPQ9Y4A5 3859 aa11.04□□□□□ -0.64
CTSA-219ENST00000607841 LINC01619G3V211 115 aa11.03□□□□□ -0.64
CTSA-219ENST00000607841 IFNA21P01568 189 aa11.03□□□□□ -0.64
CTSA-219ENST00000607841 HOXB5P09067 269 aa11.03□□□□□ -0.64
CTSA-219ENST00000607841 SLC25A6P12236 298 aa11.03□□□□□ -0.64
CTSA-219ENST00000607841 SUB1P53999 127 aaKnown RBP eCLIP11.03□□□□□ -0.64
CTSA-219ENST00000607841 FHL3Q13643 280 aa11.03□□□□□ -0.64
CTSA-219ENST00000607841 C19orf35Q6ZS72 473 aa11.03□□□□□ -0.64
CTSA-219ENST00000607841 LINC00482Q8N8I6 264 aa11.03□□□□□ -0.64
CTSA-219ENST00000607841 DUSP18Q8NEJ0 188 aa11.03□□□□□ -0.64
CTSA-219ENST00000607841 OR1P1Q8NH06 330 aa11.03□□□□□ -0.64
CTSA-219ENST00000607841 OR1S1Q8NH92 325 aa11.03□□□□□ -0.64
CTSA-219ENST00000607841 MITD1Q8WV92 249 aa11.03□□□□□ -0.64
CTSA-219ENST00000607841 EEF1AKMT3Q96AZ1 226 aa11.03□□□□□ -0.64
CTSA-219ENST00000607841 PEF1Q9UBV8 284 aaKnown RBP11.03□□□□□ -0.64
CTSA-219ENST00000607841 TNCP24821 2201 aa11.03□□□□□ -0.64
CTSA-219ENST00000607841 CEBPZOSA8MTT3 80 aa11.02□□□□□ -0.65
CTSA-219ENST00000607841 NDUFB8O95169 186 aa11.02□□□□□ -0.65
CTSA-219ENST00000607841 ZP3P21754 424 aa11.02□□□□□ -0.65
CTSA-219ENST00000607841 DEFA5Q01523 94 aa11.02□□□□□ -0.65
CTSA-219ENST00000607841 EXOSC2Q13868 293 aaKnown RBP11.02□□□□□ -0.65
CTSA-219ENST00000607841 SPINK9Q5DT21 86 aa11.02□□□□□ -0.65
CTSA-219ENST00000607841 PLET1Q6UQ28 207 aa11.02□□□□□ -0.65
CTSA-219ENST00000607841 NRARPQ7Z6K4 114 aa11.02□□□□□ -0.65
CTSA-219ENST00000607841 ZNF114Q8NC26 417 aa11.02□□□□□ -0.65
CTSA-219ENST00000607841 IGHV4OR15-8A0A075B7B6 117 aa11.01□□□□□ -0.65
CTSA-219ENST00000607841 A0A087WW49 117 aa11.01□□□□□ -0.65
CTSA-219ENST00000607841 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.01□□□□□ -0.65
CTSA-219ENST00000607841 TRBV7-1A0A0A6YYK4 115 aa11.01□□□□□ -0.65
CTSA-219ENST00000607841 ANKRD34BA5PLL1 514 aa11.01□□□□□ -0.65
CTSA-219ENST00000607841 GGNBP1Q5YKI7 109 aa11.01□□□□□ -0.65
CTSA-219ENST00000607841 VN1R17PQ8TDU5 208 aa11.01□□□□□ -0.65
CTSA-219ENST00000607841 ZNF431Q8TF32 576 aaPredicted RBP11.01□□□□□ -0.65
CTSA-219ENST00000607841 RCC1LQ96I51 464 aaKnown RBP11.01□□□□□ -0.65
CTSA-219ENST00000607841 MCRIP2Q9BUT9 160 aaKnown RBP11.01□□□□□ -0.65
CTSA-219ENST00000607841 HIPK2Q9H2X6 1198 aa11.01□□□□□ -0.65
CTSA-219ENST00000607841 HEYLQ9NQ87 328 aaPredicted RBP11.01□□□□□ -0.65
CTSA-219ENST00000607841 HSPB7Q9UBY9 170 aa11.01□□□□□ -0.65
CTSA-219ENST00000607841 CMYA5Q8N3K9 4069 aa11□□□□□ -0.65
CTSA-219ENST00000607841 FAM90A26D6RGX4 464 aa11□□□□□ -0.65
CTSA-219ENST00000607841 CORTO00230 105 aa11□□□□□ -0.65
CTSA-219ENST00000607841 IL5P05113 134 aa11□□□□□ -0.65
CTSA-219ENST00000607841 HTR2BP41595 481 aa11□□□□□ -0.65
CTSA-219ENST00000607841 TNFRSF9Q07011 255 aa11□□□□□ -0.65
CTSA-219ENST00000607841 OR52B4Q8NGK2 314 aa11□□□□□ -0.65
CTSA-219ENST00000607841 GPR61Q9BZJ8 451 aa11□□□□□ -0.65
CTSA-219ENST00000607841 GPN1Q9HCN4 374 aaPredicted RBP11□□□□□ -0.65
CTSA-219ENST00000607841 PALMDQ9NP74 551 aa11□□□□□ -0.65
CTSA-219ENST00000607841 DMRT1Q9Y5R6 373 aa11□□□□□ -0.65
CTSA-219ENST00000607841 INMT-MINDY4F8WBC2 141 aa10.99□□□□□ -0.65
CTSA-219ENST00000607841 PRAF2O60831 178 aa10.99□□□□□ -0.65
CTSA-219ENST00000607841 PITX3O75364 302 aa10.99□□□□□ -0.65
CTSA-219ENST00000607841 MED6O75586 246 aa10.99□□□□□ -0.65
CTSA-219ENST00000607841 ADAP1O75689 374 aa10.99□□□□□ -0.65
CTSA-219ENST00000607841 NXPH3O95157 252 aa10.99□□□□□ -0.65
CTSA-219ENST00000607841 TATDN3Q17R31 274 aa10.99□□□□□ -0.65
CTSA-219ENST00000607841 NOXA1Q86UR1 476 aa10.99□□□□□ -0.65
CTSA-219ENST00000607841 MISP3Q96FF7 219 aa10.99□□□□□ -0.65
CTSA-219ENST00000607841 ATP6V0BQ99437 205 aa10.99□□□□□ -0.65
CTSA-219ENST00000607841 HOXD3P31249 432 aaPredicted RBP10.98□□□□□ -0.65
CTSA-219ENST00000607841 SLURP1P55000 103 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms