RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 IFNA17P01571 189 aa10.75□□□□□ -0.69
RNF40-212ENST00000602784 PF4P02776 101 aa10.75□□□□□ -0.69
RNF40-212ENST00000602784 H2AFB2P0C5Z0 115 aa10.75□□□□□ -0.69
RNF40-212ENST00000602784 SULT1A3P0DMM9 295 aa10.75□□□□□ -0.69
RNF40-212ENST00000602784 SULT1A4P0DMN0 295 aa10.75□□□□□ -0.69
RNF40-212ENST00000602784 DEFA4P12838 97 aa10.75□□□□□ -0.69
RNF40-212ENST00000602784 SPCS3P61009 180 aa10.75□□□□□ -0.69
RNF40-212ENST00000602784 C4orf46Q504U0 113 aa10.75□□□□□ -0.69
RNF40-212ENST00000602784 FAM209BQ5JX69 171 aa10.75□□□□□ -0.69
RNF40-212ENST00000602784 ETV3LQ6ZN32 361 aa10.75□□□□□ -0.69
RNF40-212ENST00000602784 OR1L6Q8NGR2 347 aa10.75□□□□□ -0.69
RNF40-212ENST00000602784 ENKURQ8TC29 256 aa10.75□□□□□ -0.69
RNF40-212ENST00000602784 PLEKHA3Q9HB20 300 aa10.75□□□□□ -0.69
RNF40-212ENST00000602784 IGLV11-55A0A075B6I3 123 aa10.74□□□□□ -0.69
RNF40-212ENST00000602784 TRAV6A0A075B6T7 132 aa10.74□□□□□ -0.69
RNF40-212ENST00000602784 PRH1P02810 166 aa10.74□□□□□ -0.69
RNF40-212ENST00000602784 REG1AP05451 166 aa10.74□□□□□ -0.69
RNF40-212ENST00000602784 ERHP84090 104 aaKnown RBP10.74□□□□□ -0.69
RNF40-212ENST00000602784 ATP5G2Q06055 141 aa10.74□□□□□ -0.69
RNF40-212ENST00000602784 FHL3Q13643 280 aa10.74□□□□□ -0.69
RNF40-212ENST00000602784 SMCO1Q147U7 214 aa10.74□□□□□ -0.69
RNF40-212ENST00000602784 ZNF343Q6P1L6 599 aa10.74□□□□□ -0.69
RNF40-212ENST00000602784 OR2C3Q8N628 320 aa10.74□□□□□ -0.69
RNF40-212ENST00000602784 ZNF114Q8NC26 417 aa10.74□□□□□ -0.69
RNF40-212ENST00000602784 OR1N2Q8NGR9 330 aa10.74□□□□□ -0.69
RNF40-212ENST00000602784 COQ8AQ8NI60 647 aa10.74□□□□□ -0.69
RNF40-212ENST00000602784 MITD1Q8WV92 249 aa10.74□□□□□ -0.69
RNF40-212ENST00000602784 THYN1Q9P016 225 aa10.74□□□□□ -0.69
RNF40-212ENST00000602784 FBXL7Q9UJT9 491 aa10.74□□□□□ -0.69
RNF40-212ENST00000602784 F11RQ9Y624 299 aaKnown RBP10.74□□□□□ -0.69
RNF40-212ENST00000602784 HSPB1P04792 205 aaKnown RBP10.73□□□□□ -0.69
RNF40-212ENST00000602784 ZNF616Q08AN1 781 aa10.73□□□□□ -0.69
RNF40-212ENST00000602784 DEFB136Q30KP8 78 aa10.73□□□□□ -0.69
RNF40-212ENST00000602784 C15orf32Q32M92 178 aa10.73□□□□□ -0.69
RNF40-212ENST00000602784 NRARPQ7Z6K4 114 aa10.73□□□□□ -0.69
RNF40-212ENST00000602784 LINC00482Q8N8I6 264 aa10.73□□□□□ -0.69
RNF40-212ENST00000602784 OR11H1Q8NG94 326 aa10.73□□□□□ -0.69
RNF40-212ENST00000602784 OR1P1Q8NH06 330 aa10.73□□□□□ -0.69
RNF40-212ENST00000602784 PITX3O75364 302 aa10.72□□□□□ -0.69
RNF40-212ENST00000602784 OR2J3O76001 311 aa10.72□□□□□ -0.69
RNF40-212ENST00000602784 IGHV3-11P01762 117 aa10.72□□□□□ -0.69
RNF40-212ENST00000602784 IL5P05113 134 aa10.72□□□□□ -0.69
RNF40-212ENST00000602784 OR8U8P0C7N1 319 aa10.72□□□□□ -0.69
RNF40-212ENST00000602784 C19orf35Q6ZS72 473 aa10.72□□□□□ -0.69
RNF40-212ENST00000602784 DPF1Q92782 380 aa10.72□□□□□ -0.69
RNF40-212ENST00000602784 CXorf58Q96LI9 332 aa10.72□□□□□ -0.69
RNF40-212ENST00000602784 OR5B12Q96R08 314 aa10.72□□□□□ -0.69
RNF40-212ENST00000602784 RANGRFQ9HD47 186 aaPredicted RBP10.72□□□□□ -0.69
RNF40-212ENST00000602784 PALMDQ9NP74 551 aa10.72□□□□□ -0.69
RNF40-212ENST00000602784 ENY2Q9NPA8 101 aa10.72□□□□□ -0.69
RNF40-212ENST00000602784 HSPB7Q9UBY9 170 aa10.72□□□□□ -0.69
RNF40-212ENST00000602784 DMRT1Q9Y5R6 373 aa10.72□□□□□ -0.69
RNF40-212ENST00000602784 NBEAL1Q6ZS30 2694 aa10.72□□□□□ -0.69
RNF40-212ENST00000602784 FAM90A26D6RGX4 464 aa10.71□□□□□ -0.69
RNF40-212ENST00000602784 LINC01619G3V211 115 aa10.71□□□□□ -0.69
RNF40-212ENST00000602784 NDUFB8O95169 186 aa10.71□□□□□ -0.69
RNF40-212ENST00000602784 IFNA21P01568 189 aa10.71□□□□□ -0.69
RNF40-212ENST00000602784 HOXB5P09067 269 aa10.71□□□□□ -0.69
RNF40-212ENST00000602784 SNCAP37840 140 aa10.71□□□□□ -0.69
RNF40-212ENST00000602784 TNFRSF9Q07011 255 aa10.71□□□□□ -0.69
RNF40-212ENST00000602784 GGNBP1Q5YKI7 109 aa10.71□□□□□ -0.69
RNF40-212ENST00000602784 PVRIGQ6DKI7 326 aa10.71□□□□□ -0.69
RNF40-212ENST00000602784 SLC25A24Q6NUK1 477 aa10.71□□□□□ -0.69
RNF40-212ENST00000602784 PLET1Q6UQ28 207 aa10.71□□□□□ -0.69
RNF40-212ENST00000602784 VN1R17PQ8TDU5 208 aa10.71□□□□□ -0.69
RNF40-212ENST00000602784 ZNF431Q8TF32 576 aaPredicted RBP10.71□□□□□ -0.69
RNF40-212ENST00000602784 DUX3Q96PT4 197 aa10.71□□□□□ -0.69
RNF40-212ENST00000602784 ATP6V0BQ99437 205 aa10.71□□□□□ -0.69
RNF40-212ENST00000602784 MARVELD1Q9BSK0 173 aa10.71□□□□□ -0.69
RNF40-212ENST00000602784 PEF1Q9UBV8 284 aaKnown RBP10.71□□□□□ -0.69
RNF40-212ENST00000602784 NOTCH3Q9UM47 2321 aa10.71□□□□□ -0.69
RNF40-212ENST00000602784 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.7□□□□□ -0.7
RNF40-212ENST00000602784 TRBV7-1A0A0A6YYK4 115 aa10.7□□□□□ -0.7
RNF40-212ENST00000602784 CD33P20138 364 aa10.7□□□□□ -0.7
RNF40-212ENST00000602784 ZP3P21754 424 aa10.7□□□□□ -0.7
RNF40-212ENST00000602784 HOXA1P49639 335 aaPredicted RBP10.7□□□□□ -0.7
RNF40-212ENST00000602784 SUB1P53999 127 aaKnown RBP eCLIP10.7□□□□□ -0.7
RNF40-212ENST00000602784 MFAP2P55001 183 aa10.7□□□□□ -0.7
RNF40-212ENST00000602784 DEFA5Q01523 94 aa10.7□□□□□ -0.7
RNF40-212ENST00000602784 EXOSC2Q13868 293 aaKnown RBP10.7□□□□□ -0.7
RNF40-212ENST00000602784 BSXQ3C1V8 233 aa10.7□□□□□ -0.7
RNF40-212ENST00000602784 SPINK9Q5DT21 86 aa10.7□□□□□ -0.7
RNF40-212ENST00000602784 OR52B4Q8NGK2 314 aa10.7□□□□□ -0.7
RNF40-212ENST00000602784 OR1S1Q8NH92 325 aa10.7□□□□□ -0.7
RNF40-212ENST00000602784 EEF1AKMT3Q96AZ1 226 aa10.7□□□□□ -0.7
RNF40-212ENST00000602784 RCC1LQ96I51 464 aaKnown RBP10.7□□□□□ -0.7
RNF40-212ENST00000602784 IGHV4OR15-8A0A075B7B6 117 aa10.69□□□□□ -0.7
RNF40-212ENST00000602784 A0A087WW49 117 aa10.69□□□□□ -0.7
RNF40-212ENST00000602784 ANKRD34BA5PLL1 514 aa10.69□□□□□ -0.7
RNF40-212ENST00000602784 CEBPZOSA8MTT3 80 aa10.69□□□□□ -0.7
RNF40-212ENST00000602784 PRAF2O60831 178 aa10.69□□□□□ -0.7
RNF40-212ENST00000602784 ADAP1O75689 374 aa10.69□□□□□ -0.7
RNF40-212ENST00000602784 HTR2BP41595 481 aa10.69□□□□□ -0.7
RNF40-212ENST00000602784 SEC22CQ9BRL7 303 aa10.69□□□□□ -0.7
RNF40-212ENST00000602784 HIPK2Q9H2X6 1198 aa10.69□□□□□ -0.7
RNF40-212ENST00000602784 HEYLQ9NQ87 328 aaPredicted RBP10.69□□□□□ -0.7
RNF40-212ENST00000602784 FBN3Q75N90 2809 aa10.68□□□□□ -0.7
RNF40-212ENST00000602784 INMT-MINDY4F8WBC2 141 aa10.68□□□□□ -0.7
RNF40-212ENST00000602784 CORTO00230 105 aa10.68□□□□□ -0.7
RNF40-212ENST00000602784 PTTG1O95997 202 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms