RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 ID3Q02535 119 aa15.59■□□□□ 0.09
SHKBP1-222ENST00000600320 KIAA0141Q14154 515 aaPredicted RBP15.59■□□□□ 0.09
SHKBP1-222ENST00000600320 GSG1LQ6UXU4 331 aa15.59■□□□□ 0.09
SHKBP1-222ENST00000600320 C3orf56Q8N813 242 aa15.59■□□□□ 0.09
SHKBP1-222ENST00000600320 C2orf50Q96LR7 162 aa15.59■□□□□ 0.09
SHKBP1-222ENST00000600320 FANCD2OSQ96PS1 177 aa15.59■□□□□ 0.09
SHKBP1-222ENST00000600320 MAGT1Q9H0U3 335 aa15.59■□□□□ 0.09
SHKBP1-222ENST00000600320 GSKIPQ9P0R6 139 aa15.59■□□□□ 0.09
SHKBP1-222ENST00000600320 DMRT1Q9Y5R6 373 aa15.59■□□□□ 0.09
SHKBP1-222ENST00000600320 H3BUA1 57 aa15.58■□□□□ 0.08
SHKBP1-222ENST00000600320 RAB9AP51151 201 aa15.58■□□□□ 0.08
SHKBP1-222ENST00000600320 C18orf65Q6ZTR6 163 aa15.58■□□□□ 0.08
SHKBP1-222ENST00000600320 MYOZ3Q8TDC0 251 aa15.58■□□□□ 0.08
SHKBP1-222ENST00000600320 WDR89Q96FK6 387 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-222ENST00000600320 P2RX4Q99571 388 aa15.58■□□□□ 0.08
SHKBP1-222ENST00000600320 ENY2Q9NPA8 101 aa15.58■□□□□ 0.08
SHKBP1-222ENST00000600320 MGAT4CQ9UBM8 478 aa15.58■□□□□ 0.08
SHKBP1-222ENST00000600320 TCRBV4S1A1TA0A5B7 111 aa15.57■□□□□ 0.08
SHKBP1-222ENST00000600320 FAM90A26D6RGX4 464 aa15.57■□□□□ 0.08
SHKBP1-222ENST00000600320 BRI3O95415 125 aa15.57■□□□□ 0.08
SHKBP1-222ENST00000600320 TRGV3P03979 118 aa15.57■□□□□ 0.08
SHKBP1-222ENST00000600320 TPPP2P59282 170 aa15.57■□□□□ 0.08
SHKBP1-222ENST00000600320 ERHP84090 104 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-222ENST00000600320 IL15RAQ13261 267 aa15.57■□□□□ 0.08
SHKBP1-222ENST00000600320 FCN2Q15485 313 aa15.57■□□□□ 0.08
SHKBP1-222ENST00000600320 F11RQ9Y624 299 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-222ENST00000600320 STAB1Q9NY15 2570 aa15.56■□□□□ 0.08
SHKBP1-222ENST00000600320 IGLV11-55A0A075B6I3 123 aa15.56■□□□□ 0.08
SHKBP1-222ENST00000600320 TRBV9A0A0B4J1U6 114 aa15.56■□□□□ 0.08
SHKBP1-222ENST00000600320 ADARB2-AS1A8MUL3 147 aa15.56■□□□□ 0.08
SHKBP1-222ENST00000600320 OR2J3O76001 311 aa15.56■□□□□ 0.08
SHKBP1-222ENST00000600320 SCGB1D2O95969 90 aa15.56■□□□□ 0.08
SHKBP1-222ENST00000600320 RNASE2P10153 161 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-222ENST00000600320 IAPPP10997 89 aa15.56■□□□□ 0.08
SHKBP1-222ENST00000600320 NKX2-1P43699 371 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-222ENST00000600320 POLR2GP62487 172 aaKnown RBP eCLIP15.56■□□□□ 0.08
SHKBP1-222ENST00000600320 KLK9Q2XQG4 91 aa15.56■□□□□ 0.08
SHKBP1-222ENST00000600320 KHDC1LQ5JSQ8 128 aa15.56■□□□□ 0.08
SHKBP1-222ENST00000600320 TMEM65Q6PI78 240 aa15.56■□□□□ 0.08
SHKBP1-222ENST00000600320 MRPL41Q8IXM3 137 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-222ENST00000600320 DTD1Q8TEA8 209 aa15.56■□□□□ 0.08
SHKBP1-222ENST00000600320 CACFD1Q9UGQ2 172 aa15.56■□□□□ 0.08
SHKBP1-222ENST00000600320 KLK9Q9UKQ9 250 aa15.56■□□□□ 0.08
SHKBP1-222ENST00000600320 NDUFB8O95169 186 aa15.55■□□□□ 0.08
SHKBP1-222ENST00000600320 MBPP02686 304 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-222ENST00000600320 DEFA4P12838 97 aa15.55■□□□□ 0.08
SHKBP1-222ENST00000600320 CXCL3P19876 107 aa15.55■□□□□ 0.08
SHKBP1-222ENST00000600320 H2BFSP57053 126 aa15.55■□□□□ 0.08
SHKBP1-222ENST00000600320 RPL23AP62750 156 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-222ENST00000600320 RHOGP84095 191 aa15.55■□□□□ 0.08
SHKBP1-222ENST00000600320 BSXQ3C1V8 233 aa15.55■□□□□ 0.08
SHKBP1-222ENST00000600320 ZNF491Q8N8L2 437 aa15.55■□□□□ 0.08
SHKBP1-222ENST00000600320 ZNF114Q8NC26 417 aa15.55■□□□□ 0.08
SHKBP1-222ENST00000600320 OR11H7Q8NGC8 314 aa15.55■□□□□ 0.08
SHKBP1-222ENST00000600320 MED28Q9H204 178 aa15.55■□□□□ 0.08
SHKBP1-222ENST00000600320 SLA2Q9H6Q3 261 aa15.55■□□□□ 0.08
SHKBP1-222ENST00000600320 HEYLQ9NQ87 328 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-222ENST00000600320 A0A1W2PRX2 142 aa15.54■□□□□ 0.08
SHKBP1-222ENST00000600320 SYNGR2O43760 224 aa15.54■□□□□ 0.08
SHKBP1-222ENST00000600320 MED6O75586 246 aa15.54■□□□□ 0.08
SHKBP1-222ENST00000600320 SLC25A24Q6NUK1 477 aa15.54■□□□□ 0.08
SHKBP1-222ENST00000600320 Q6ZNX1 250 aa15.54■□□□□ 0.08
SHKBP1-222ENST00000600320 OR1P1Q8NH06 330 aa15.54■□□□□ 0.08
SHKBP1-222ENST00000600320 TMEM170AQ8WVE7 144 aa15.54■□□□□ 0.08
SHKBP1-222ENST00000600320 GNB4Q9HAV0 340 aa15.54■□□□□ 0.08
SHKBP1-222ENST00000600320 FBXL7Q9UJT9 491 aa15.54■□□□□ 0.08
SHKBP1-222ENST00000600320 RCL1Q9Y2P8 373 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-222ENST00000600320 FBN3Q75N90 2809 aa15.54■□□□□ 0.08
SHKBP1-222ENST00000600320 WRBO00258 174 aa15.53■□□□□ 0.08
SHKBP1-222ENST00000600320 PVRIGQ6DKI7 326 aa15.53■□□□□ 0.08
SHKBP1-222ENST00000600320 SHISA2Q6UWI4 295 aa15.53■□□□□ 0.08
SHKBP1-222ENST00000600320 SLC24A4Q8NFF2 622 aa15.53■□□□□ 0.08
SHKBP1-222ENST00000600320 HIPK2Q9H2X6 1198 aa15.53■□□□□ 0.08
SHKBP1-222ENST00000600320 ZFP57Q9NU63 452 aa15.53■□□□□ 0.08
SHKBP1-222ENST00000600320 TSSC4Q9Y5U2 329 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-222ENST00000600320 K7EPK0 472 aa15.52■□□□□ 0.08
SHKBP1-222ENST00000600320 SSSCA1O60232 199 aa15.52■□□□□ 0.08
SHKBP1-222ENST00000600320 TMEM50AO95807 157 aa15.52■□□□□ 0.08
SHKBP1-222ENST00000600320 IGHV3-11P01762 117 aa15.52■□□□□ 0.08
SHKBP1-222ENST00000600320 HIST1H1BP16401 226 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-222ENST00000600320 SNCAP37840 140 aa15.52■□□□□ 0.08
SHKBP1-222ENST00000600320 RRAS2P62070 204 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-222ENST00000600320 NSUN5P1Q3KNT7 163 aa15.52■□□□□ 0.08
SHKBP1-222ENST00000600320 NDUFA11Q86Y39 141 aa15.52■□□□□ 0.08
SHKBP1-222ENST00000600320 OR5B12Q96R08 314 aa15.52■□□□□ 0.08
SHKBP1-222ENST00000600320 LSM5Q9Y4Y9 91 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-222ENST00000600320 S4R3C0 116 aa15.52■□□□□ 0.08
SHKBP1-222ENST00000600320 HTR2BP41595 481 aa15.51■□□□□ 0.07
SHKBP1-222ENST00000600320 CDX1P47902 265 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-222ENST00000600320 PAX9P55771 341 aa15.51■□□□□ 0.07
SHKBP1-222ENST00000600320 RAB32Q13637 225 aa15.51■□□□□ 0.07
SHKBP1-222ENST00000600320 NECAP1Q8NC96 275 aa15.51■□□□□ 0.07
SHKBP1-222ENST00000600320 UBE2E2Q96LR5 201 aa15.51■□□□□ 0.07
SHKBP1-222ENST00000600320 NMES1Q9C002 83 aa15.51■□□□□ 0.07
SHKBP1-222ENST00000600320 IGHV3-21A0A0B4J1V1 117 aa15.5■□□□□ 0.07
SHKBP1-222ENST00000600320 MFSD2BA6NFX1 497 aa15.5■□□□□ 0.07
SHKBP1-222ENST00000600320 FAM223BA6NKX1 122 aa15.5■□□□□ 0.07
SHKBP1-222ENST00000600320 C15orf62A8K5M9 175 aa15.5■□□□□ 0.07
SHKBP1-222ENST00000600320 NPY1RP25929 384 aa15.5■□□□□ 0.07
SHKBP1-222ENST00000600320 C15orf32Q32M92 178 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms