RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 RPL15P61313 204 aaKnown RBP9.5□□□□□ -0.89
SHKBP1-213ENST00000597325 POLR2GP62487 172 aaKnown RBP eCLIP9.5□□□□□ -0.89
SHKBP1-213ENST00000597325 ID3Q02535 119 aa9.5□□□□□ -0.89
SHKBP1-213ENST00000597325 MRGPRG-AS1Q2M3A8 158 aa9.5□□□□□ -0.89
SHKBP1-213ENST00000597325 HSD17B13Q7Z5P4 300 aaPredicted RBP9.5□□□□□ -0.89
SHKBP1-213ENST00000597325 WWC2-AS2Q96NR7 200 aa9.5□□□□□ -0.89
SHKBP1-213ENST00000597325 RAB40CQ96S21 281 aa9.5□□□□□ -0.89
SHKBP1-213ENST00000597325 HSPB9Q9BQS6 159 aa9.5□□□□□ -0.89
SHKBP1-213ENST00000597325 SRSF8Q9BRL6 282 aaKnown RBP9.5□□□□□ -0.89
SHKBP1-213ENST00000597325 HEYLQ9NQ87 328 aaPredicted RBP9.5□□□□□ -0.89
SHKBP1-213ENST00000597325 NDUFA4L2Q9NRX3 87 aa9.5□□□□□ -0.89
SHKBP1-213ENST00000597325 HERC2O95714 4834 aa9.5□□□□□ -0.89
SHKBP1-213ENST00000597325 MSGN1A6NI15 193 aa9.49□□□□□ -0.89
SHKBP1-213ENST00000597325 MPC2O95563 127 aa9.49□□□□□ -0.89
SHKBP1-213ENST00000597325 IAPPP10997 89 aa9.49□□□□□ -0.89
SHKBP1-213ENST00000597325 RPL23AP62750 156 aaKnown RBP9.49□□□□□ -0.89
SHKBP1-213ENST00000597325 BLCAPP62952 87 aa9.49□□□□□ -0.89
SHKBP1-213ENST00000597325 RPP30P78346 268 aaKnown RBP9.49□□□□□ -0.89
SHKBP1-213ENST00000597325 ERHP84090 104 aaKnown RBP9.49□□□□□ -0.89
SHKBP1-213ENST00000597325 NDPQ00604 133 aa9.49□□□□□ -0.89
SHKBP1-213ENST00000597325 IL15RAQ13261 267 aa9.49□□□□□ -0.89
SHKBP1-213ENST00000597325 TCTE3Q8IZS6 198 aa9.49□□□□□ -0.89
SHKBP1-213ENST00000597325 FAM110DQ8TAY7 271 aaPredicted RBP9.49□□□□□ -0.89
SHKBP1-213ENST00000597325 WDR89Q96FK6 387 aaPredicted RBP9.49□□□□□ -0.89
SHKBP1-213ENST00000597325 ST6GAL2Q96JF0 529 aa9.49□□□□□ -0.89
SHKBP1-213ENST00000597325 FAM181BA6NEQ2 426 aa9.48□□□□□ -0.89
SHKBP1-213ENST00000597325 AP4M1O00189 453 aa9.48□□□□□ -0.89
SHKBP1-213ENST00000597325 ATP6V0E1O15342 81 aa9.48□□□□□ -0.89
SHKBP1-213ENST00000597325 DEDDO75618 318 aa9.48□□□□□ -0.89
SHKBP1-213ENST00000597325 IGHG2P01859 326 aa9.48□□□□□ -0.89
SHKBP1-213ENST00000597325 APELAP0DMC3 54 aa9.48□□□□□ -0.89
SHKBP1-213ENST00000597325 SNCAP37840 140 aa9.48□□□□□ -0.89
SHKBP1-213ENST00000597325 SSBP2P81877 361 aaPredicted RBP9.48□□□□□ -0.89
SHKBP1-213ENST00000597325 TMEM267Q0VDI3 215 aaPredicted RBP9.48□□□□□ -0.89
SHKBP1-213ENST00000597325 ECSCRQ19T08 205 aa9.48□□□□□ -0.89
SHKBP1-213ENST00000597325 PRSS54Q6PEW0 395 aa9.48□□□□□ -0.89
SHKBP1-213ENST00000597325 DCUN1D4Q92564 292 aa9.48□□□□□ -0.89
SHKBP1-213ENST00000597325 FAM103A1Q9BTL3 118 aaKnown RBP9.48□□□□□ -0.89
SHKBP1-213ENST00000597325 MBD2Q9UBB5 411 aa9.48□□□□□ -0.89
SHKBP1-213ENST00000597325 FXYD6-FXYD2A0A087WZ82 144 aa9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 TRAV14DV4A0A0A6YYC5 116 aa9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 TEX22C9J3V5 150 aa9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 E5RGE8 158 aa9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 SMLR1H3BR10 107 aa9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 CYB5BO43169 146 aa9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 IFNA10P01566 189 aa9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 OR13C7P0DN81 318 aa9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 NUP62P37198 522 aaPredicted RBP9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 VDAC2P45880 294 aaPredicted RBP9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 CAV2P51636 162 aa9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 SUB1P53999 127 aaKnown RBP eCLIP9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 UNQ5815/PRO19632Q6UWF5 114 aa9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 SLC24A4Q8NFF2 622 aa9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 OR10W1Q8NGF6 305 aa9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 OR2T6Q8NHC8 308 aa9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 TMEM68Q96MH6 324 aa9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 NEURL2Q9BR09 285 aa9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 ZNF702PQ9H963 129 aa9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 PSENENQ9NZ42 101 aa9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 PAIP2BQ9ULR5 123 aaKnown RBP9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 WSB1Q9Y6I7 421 aa9.47□□□□□ -0.89
SHKBP1-213ENST00000597325 TRAV41A0A0B4J266 112 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 A0A1B0GW64 132 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 IGLC7A0M8Q6 106 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 CGB1A6NKQ9 187 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 E7EUB6 86 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 INS-IGF2F8WCM5 200 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 H3BP45 60 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 TSC22D2O75157 780 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 REG1AP05451 166 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 AREGP15514 252 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 HTR2BP41595 481 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 TAS2R30P59541 319 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 WT1-ASQ06250 92 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 ZFP69Q49AA0 526 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 SPANXN5Q5MJ07 72 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 NOXA1Q86UR1 476 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 LFNGQ8NES3 379 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 SMIM8Q96KF7 97 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 GON7Q9BXV9 100 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 ZC4H2Q9NQZ6 224 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 OR5AC2Q9NZP5 309 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 STRAPQ9Y3F4 350 aaKnown RBP9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 FBXO7Q9Y3I1 522 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 U3KQ87 197 aa9.46□□□□□ -0.9
SHKBP1-213ENST00000597325 CLPSL1A2RUU4 121 aa9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 NPIPB5A8MRT5 1133 aa9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 SCAF4O95104 1147 aaKnown RBP9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 C1QBP02746 253 aa9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 IGF1P05019 195 aa9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 OR8U8P0C7N1 319 aa9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 SLC25A4P12235 298 aa9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 DEFA4P12838 97 aa9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 NPY1RP25929 384 aa9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 P2RY1P47900 373 aa9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 CRIP2P52943 208 aaPredicted RBP9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 RAB11AP62491 216 aa9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 AKIRIN2Q53H80 203 aa9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 Q6ZS46 218 aa9.45□□□□□ -0.9
SHKBP1-213ENST00000597325 STX12Q86Y82 276 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms